ID   AB796348; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796348;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: At176.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 2a05ec2a3a7cb5f47dc2fda607e8f88f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /isolate="At176"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Akita, Daisen"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M5AEA4"
FT                   /protein_id="BAM99889.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELKWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 500 A; 347 C; 437 G; 383 T; 0 other;
     aaagacgggc gaatccaaga tggttgacca ctttgccttt attgatgttt ctcgagatgg        60
     gcaggttatt cctgtccctt tcgtcgacag aactaaaggc tacagtgggc tcccaatctt       120
     agatgagttt ggacacccgg tgggaatctt cggattcctc aggacaatga gggccaagac       180
     ggaaaatggc gtcatcgata gaccagagag cgctcgaccg agcgtgcaag ttgggcagtt       240
     tgatataaca acgaaagctg tcgacgtatt acaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctt agacttgggg ccccaacagc ttctgggaag agcacaagac ttgtgaagga       360
     aattggaaga ataatgtacc agaaggctcg caggcctatt cacatcgccg tgcttgaacc       420
     tagggtgttt gttgtgaaca acttgtggca agggcagagc atgatgacta atgccgacgc       480
     aaaagattgt acattcttta acatcgtccg caaacacggg cgattgtacg aaaacgacaa       540
     gacacaatca cacaaagacc cgagccaggc caaggtcacg ataacatata tgacctacgg       600
     atcaatggta gccagcctag ggaaagagct caaatgggat ttagttatct tagatgagtt       660
     ccacagccgg agcgatagtg atgtgttggc agtagatgcc gcactacagg tgttaggaca       720
     ttataacgga gtcatggcga tgacggcaac cttttgggca ccagacccaa cgatgaatcg       780
     atttgttgat tactccattg ggacggcgaa gaagttccct atcgagagga aggtgatcaa       840
     gaagtttgat tcagttactg aaggtgaaga agggctatac tttaagatca gaggccctga       900
     cggcacattc tacgcccttc caagggaaag ttgcaacgca ggcgggaaaa ctatcgtttt       960
     cttggacagt aaaaacaatt gtgcgaaagg catgaaggag cttttggcaa caggaccagg      1020
     agtgaacgta atgacactca caagtgaaaa tagagacgtc gaaattccag acggtcaagt      1080
     ggtgattttt gctacaaacg tcgctgagag tggagtcaca attgttaact gtgataacgt      1140
     gatcagcttc ggagtgcaga ttgagccaca agcaggtttt gatgtaaatc tgggcgaaga      1200
     tggaactttt gattcctatc attcacttgt gcaaacaaaa ataacaacct gtgcagagac      1260
     ccagcaaatg gggagaactg gaaggacatg tccaggaaca ttttggacaa caataaccac      1320
     gcctctccct gagatgacag atttcccccg gcatgccatg tccggggcgt acttaacatt      1380
     aatgagaaat gatgaagtca tggagatggc tgaagtgaga caacgtggtg gacagtggga      1440
     agatctacta cacacgttga gaaatttaca cccaaagttt ttgccagcca gccttaattt      1500
     cagggctgtt aaaggagagt atcccagcat tactgagttg aaggacttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aagacatttt ctggcggaaa ctagaggttg ttcagtgcat      1620
     ccaatacatt gatcctatca ccttctatct tctgcctaac ttcccaa                    1667
//