ID   AB796347; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796347;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: As28.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 76cbfe7679dd024c3640c68039343c40.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="As28"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Hachimantai, Ashiro"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZU68"
FT                   /protein_id="BAM99888.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWPPDPTMNRFVDYSIGTAKKFRIERKVIKK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 504 A; 332 C; 440 G; 391 T; 0 other;
     gaagacaggc gagtccaaga tggtcgacca ctttgccttt attgatgtct cccgagatgg        60
     gcaggttatt cctgttcctt ttgttgacag aactaaaggt tatagcgggc tcccaatctt       120
     agatgagttt ggacacccgg tgggaatctt cggattcctc aggacaatga gggccaagac       180
     ggaaaatggc gtcatcgata gaccagagag cgctcgaccg agcgtgcaag ttgggcagtt       240
     tgatataaca acgaaagctg tcgacgtatt acaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctc agacttgggg ccccaacagc ttctgggaag agcacaagac ttgtgaagga       360
     aattggaaga ataatgtacc agaaagctcg caggcctatt catattgctg tgcttgaacc       420
     tagggtgttt gttgtgaata acttatggca agggcaaagc atgatgacta atgctgatgc       480
     aaaagactgt acattcttta atatcgtgcg taaacacggg cgattgtatg aaaacgacaa       540
     aacacagtcg cacaaagacc caagccaggc gaaagtcact ataacataca tgacctatgg       600
     atcaatggtg gccagtctag ggaaagaact caggtgggat ttagttatcc ttgacgagtt       660
     tcacagtcgg agtgacagtg acgtgttggc agtcgatgcc gcactgcaag tgttgggaca       720
     ttataatgga gtcatggcga tgaccgcaac tttctggcca ccagatccaa cgatgaacag       780
     gtttgttgat tactctatcg ggacggcgaa gaaatttcga atcgagagaa aggtgatcaa       840
     gaagttcgat tccgtcactg aaggtgaaga agggctgtat ttcaagatca gaggccctga       900
     cggtacattc tacgctctac caagggagag ttgcaacgca ggagggaaaa ctatcgtttt       960
     cctagacagt aaaaacaact gcgcgaaagg aatgaaggaa ctcttggcaa caggaccggg      1020
     agtgaatgta atgaccctta caagcgaaaa cagggatgtc gaaattccag acggacaagt      1080
     ggtgattttt gctacaaatg ttgctgagag cggagtcaca attgttaatt gcgacaacgt      1140
     aataagcttc ggagtgcaga ttgagccaca ggcgggtttt gatgtcaatt taggagaaga      1200
     cggaactttt gactcttatc actcacttgt gcaaacaaaa ataacgactt gtgcagaaac      1260
     ccagcaaatg ggaagaaccg ggagaacatg tccaggaaca ttttggacaa caataacaac      1320
     acctctccca gagatgacgg acttccctag acatgcaatg tctggggcgt atttaacgtt      1380
     gatgagaaat gatgaagtta tggaaatggc tgaggtcaga caacgtggtg gacagtggga      1440
     agatttatta cacacgttga ggaatttgca tccaaagttt ttaccagcca gcctcaattt      1500
     cagggctgtc aaaggggagt atcccagtat tactgagttg aaggacttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat      1620
     tcaatacatt gacccaatca ccttctacct tctgcctaac ttcccaa                    1667
//