Dbfetch

Dbfetch

ID   AB745626; SV 1; linear; genomic RNA; STD; VRL; 654 BP.
XX
AC   AB745626;
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DT   06-SEP-2012 (Rel. 114, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE   Asparagus virus 2 CP gene for coat protein, complete cds, isolate: Peru.
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KW   .
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OS   Asparagus virus 2
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-654
RA   Shimura H., Masuta C.;
RT   ;
RL   Submitted (31-AUG-2012) to the INSDC.
RL   Contact:Hanako Shimura Hokkaido University, Research Faculty of
RL   Agricuclture; Kita 9, Nishi 9, Kita-ku, Sapporo, Hokkaido 060-8589, Japan
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2013.04.015.
RX   PUBMED; 23679985.
RA   Shimura H., Masuta C., Yoshida N., Sueda K., Suzuki M.;
RT   "The 2b protein of Asparagus virus 2 functions as an RNA silencing
RT   suppressor against systemic silencing to prove functional synteny with
RT   related cucumoviruses";
RL   Virology 442(2):180-188(2013).
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DR   MD5; 9a93c4574c9cd7aef6eaa2cb3ebecfc6.
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FH   Key             Location/Qualifiers
FH
FT   source          1..654
FT                   /organism="Asparagus virus 2"
FT                   /host="Asparagus officinalis"
FT                   /isolate="Peru"
FT                   /mol_type="genomic RNA"
FT                   /country="Peru"
FT                   /db_xref="taxon:39681"
FT   CDS             1..654
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q65299"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q65299"
FT                   /protein_id="BAM38506.1"
FT                   /translation="MSGNAIEVNGRWYTPAPNNAPTRGRGGRRQPTARSRQWAQGQANA
FT                   RRSQPQALMIGSVPTSLPTWKSFPGEQWHEVSGYSFPNSWGSGTLAWLTMANELNKIKT
FT                   LHDTTKVYSVMLGFTCNYDGYAGFVEGFSTSNQIHPIAPDRIRVKKGKYGARQQVFPTG
FT                   TTVSEVRSNWTFVWNFDAAPPTGSKDAITVTKFYIATSPLPGVKPPSNFLVVEE"
XX
SQ   Sequence 654 BP; 154 A; 153 C; 165 G; 182 T; 0 other;
     atgtctggta atgctattga agttaatggt cgttggtata ctccagcacc caataatgcc        60
     ccgaccagag gtcgtggagg tcgtcgtcaa cccactgctc gttctaggca gtgggctcaa       120
     ggacaggcga atgctcgtcg atcccagcca caggcgctga tgattggttc cgtgcctaca       180
     tctttaccca cctggaagtc tttcccaggg gaacaatggc acgaggtttc tgggtattct       240
     ttcccaaatt cgtggggttc tggaacattg gcttggttga ccatggccaa tgaattgaat       300
     aagataaaaa ccctacatga taccaccaag gtttattcgg tgatgttggg cttcacttgc       360
     aactatgatg gttatgccgg ctttgtcgag ggtttcagta ccagtaatca aattcatcct       420
     atcgctccgg ataggatacg agtgaagaaa gggaagtacg gtgctagaca gcaagttttc       480
     cccactggta ctacggtttc cgaagttagg tccaattgga ctttcgtttg gaacttcgat       540
     gctgctcccc ctactgggtc aaaggatgct atcactgtga cgaagtttta catcgccact       600
     tcccctttac ccggtgtgaa gccaccaagt aatttcttgg ttgttgagga atga             654
//