ID AB744680; SV 1; linear; genomic RNA; STD; VRL; 3468 BP. XX AC AB744680; XX DT 01-MAR-2013 (Rel. 116, Created) DT 10-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Rosellinia necatrix quadrivirus 1 P4 gene for capsid protein, complete cds, DE segment: 4. XX KW . XX OS Rosellinia necatrix quadrivirus 1 OC Viruses; Riboviria; Quadriviridae; Quadrivirus. XX RN [1] RP 1-3468 RA Suzuki N., Kondo H.; RT ; RL Submitted (28-AUG-2012) to the INSDC. RL Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and RL Resources; Chuo 2-20-1, Kurashiki, Okayama 710-0046, Japan XX RN [2] RC DOI:10.1007/s00705-012-1580-8 RX DOI; 10.1007/s00705-012-1580-8. RX PUBMED; 23277362. RA Lin Y.H., Hisano S., Yaegashi H., Kanematsu S., Suzuki N.; RT "A second quadrivirus strain from the phytopathogenic filamentous fungus RT Rosellinia necatrix"; RL Arch. Virol. 158(5):1093-1098(2013). XX DR MD5; a0912dc4023b55bbb9a1eb71a22b2416. XX FH Key Location/Qualifiers FH FT source 1..3468 FT /organism="Rosellinia necatrix quadrivirus 1" FT /segment="4" FT /host="Rosellinia necatrix" FT /strain="W1118" FT /mol_type="genomic RNA" FT /country="Japan:Ibaraki, Tsukuba" FT /note="this virus has alternative 5- and FT 3-terminalnucleotides C or U, and G or A, for the FT plus-strand RNA sequence respectively" FT /db_xref="taxon:1000373" FT CDS 46..3225 FT /codon_start=1 FT /transl_table=1 FT /gene="P4" FT /product="capsid protein" FT /db_xref="PDB:5ND1" FT /db_xref="UniProtKB/TrEMBL:M1VHN2" FT /protein_id="BAM93354.1" FT /translation="MSAPSDQSQETRSPTSVGNTVAADVQTSVHDKPTGELKGSDGTGI FT HEATGLPIDKRGEVPTVQLERTAESIAKMMDLLRSEKFTAAAADAKLMLQQEFQNIVAC FT AKNAPQMTVNAGRFYLGCNSTTAIIAGDTADGYEIEYSGKRIEGQCVVALEPLTITLSG FT STSSTQDNSDSAKLFALAVSQVWGGASTVGIVAPMLQTVAQEQTFRARVERDSGFQHHA FT ALTTVVTTIVGWLMHVGDSAAKRSRDGWLDHQTDFAVKGMLTPHIASGMDWAGVQTYSA FT SAMETTTDRVRADYAGRMVVHSTLRKQTLRSRGTGDTTETENSGRYLLALPKCDAGVAA FT AALALTWGKPKLGGAGHANLTAVMSEAGVGYITGVNGTRATPHADTVFGREELVYLLGF FT ALRHMADAQEQVIRNVLAQVASLFRPAACSAHEWMNVHGALMPKVSRPMNEPAFREVWN FT VANSSSDLQMIDRDKLNGEHFLRQLAQQITVNCTGTAMAIYQAVLAGPTGITDGDTTRL FT QKDLYHHLFQYATTTYADGVQVMQANTRMANKMVPPVNALAAWGLGSSMDSFTGPHCAY FT YFGLADAADGCFYSTTTGRTLSVYAVDVNHTSSDSYLAMAQLEPGLIATATGTGSTITT FT NVEAAGVVDGGLVTEGHVSLYTTISAQWNGLQREVYNWLLWHACKTEDSSHADIVGAEE FT VKSAVEWLSSNSVEAHRFRSSAGLGATEAAGSPGRRAWRLHHYDGQIFSNVIADTERHP FT YMRRLYTPSELRDARNDLFVVDRIWKIVMAMRAQLMLISVQEDGGRHQHSKHYFGEAAA FT IGVMGHGFTNLFAYCASTVHGGREARLISNCTDTPMYKKEANDLVPPMMKVAQLSTLLA FT HGGAWCNAVNMGGNSTSIGLSILGDGTMPLQTVPWTVNEITYLSEEGARHGIEAIIDTN FT GSVSVKVKMTMLEPRQRFCLYDDNKTSSYITAQESRTATYVTLKLGGTKNANTISGLVA FT HDYKLATTILASTYDKGRKTGLTLEDLQKVGGITGGQGMTGRGGGSSSGRGGRGRGGSS FT TGGAETIGDSE" XX SQ Sequence 3468 BP; 909 A; 820 C; 1015 G; 722 T; 2 other; cacgattcaa cccaactttt agttctgcta ttcgaatcaa caacaatgtc cgcaccaagt 60 gaccaatctc aggagacacg tagcccaact tctgtcggca acactgtggc agccgatgta 120 cagacatctg tgcacgacaa gcccactggt gagctgaagg ggagtgacgg cactggcatc 180 catgaggcga cgggattgcc aatcgacaag aggggagagg tacccacagt gcagttggag 240 cgtactgctg agagcattgc gaagatgatg gatctgctgc gcagcgagaa gttcactgcg 300 gctgcggctg atgccaaact gatgctgcag caggagttcc agaatattgt ggcatgtgca 360 aagaatgcac cgcagatgac tgtcaatgct ggtcgtttct acttgggctg taattccact 420 actgcaatca ttgctggaga cacagctgac ggctacgaga tcgaatactc tggcaagcgc 480 attgaaggtc aatgtgttgt agctctggag ccgttaacga tcacgctatc cggttcgact 540 tcgtccaccc aggacaactc tgactcggcg aagctgttcg ctttggctgt cagccaagtc 600 tggggtggtg ctagcacggt cggtatagtt gcgcctatgt tgcagactgt ggcacaagag 660 caaaccttca gagcgcgggt ggagcgggac agtggcttcc agcaccatgc agcgttaaca 720 acggtggtta cgaccattgt aggctggttg atgcacgtcg gggatagtgc tgcgaagagg 780 tctcgggacg gatggcttga ccaccagaca gactttgctg tgaaaggtat gctcacgccg 840 cacattgcaa gtggcatgga ctgggcaggt gtacaaacgt atagtgcatc agcaatggag 900 acgacgactg atcgtgtgag agctgactac gctggcagga tggtagtgca cagtacgctg 960 aggaagcaga ctctacgctc gcggggcacc ggtgacacga cagagacgga gaattcggga 1020 cgttacttat tggcattgcc gaaatgcgac gcaggtgttg ctgccgcggc tctagcttta 1080 acatggggca agcctaaact gggcggtgct ggacacgcaa atctgaccgc agtcatgagt 1140 gaggcaggtg tgggttacat caccggcgtc aatggaacac gtgctacgcc acacgccgat 1200 actgtattcg gtcgtgagga gttagtgtat ctgctaggct ttgctctcag acacatggct 1260 gatgcgcaag aacaggttat ccgtaacgta ctagctcagg tcgcttcgtt gttcagacca 1320 gcagcttgct cagcacacga gtggatgaat gtgcacggtg ctctgatgcc caaggtgtcg 1380 cggcctatga acgaaccagc ttttagagag gtctggaatg tcgcaaattc gtcctctgat 1440 ctgcaaatga ttgacagaga caagctcaat ggcgaacact tcctgcgaca gcttgctcaa 1500 cagatcactg tgaactgtac gggcactgca atggctatat accaggctgt gcttgctggg 1560 cccactggta taactgacgg tgacaccacg aggttgcaga aagacctgta tcaccacttg 1620 ttccagtacg caaccaccac ttacgccgac ggagttcaag tcatgcaggc caacacacga 1680 atggcgaaca agatggttcc accggtcaat gcgctagcag catgggggct aggcagctct 1740 atggactcgt tcactggacc gcattgtgca tactatttcg gactggctga tgcagctgat 1800 gggtgtttct attctaccac tacgggaagg acattatccg tgtacgctgt tgacgtaaac 1860 catacgtcaa gtgatagtta cctggcaatg gcacagttag agccaggctt gattgcgaca 1920 gcaaccggta caggatccac catcaccact aacgttgagg cggcgggggt cgttgacgga 1980 gggttggtga ccgaaggaca tgttagtctc tatactacca tcagcgccca gtggaacggc 2040 ttgcaacgcg aagtgtataa ctggttgctg tggcacgcat gcaaaacgga agactcgtcg 2100 cacgctgata tcgtaggtgc agaggaggtg aaatctgctg ttgaatggct gagtagtaac 2160 agtgttgagg cccatcgctt cagatcragt gctggattgg gagccactga ggctgctgga 2220 tcaccgggac gtcgtgcgtg gcggctacac cattacgatg gtcagatatt tagcaacgtc 2280 atcgcygaca cagagaggca tccctacatg aggcgcttgt atacgcccag cgagctacgt 2340 gatgcgagga atgacttgtt cgttgtagat agaatctgga agatagtcat ggctatgaga 2400 gcgcagctca tgttgatatc agttcaggag gatgggggca gacatcaaca ctccaaacac 2460 tacttcggtg aagcggctgc tatcggcgtc atgggacatg gattcacgaa cctgtttgca 2520 tattgtgcca gcacagtgca tgggggcagg gaggcacgcc tgatcagcaa ctgcactgat 2580 acgcccatgt acaagaagga agctaatgat ctggttccgc cgatgatgaa agtggcccag 2640 ctaagcactc tgctggcaca cggaggcgcc tggtgtaatg cagtgaacat gggcggaaat 2700 tcgacttcga taggcctgag tatattagga gatgggacaa tgccactgca gacggtacca 2760 tggactgtca acgagataac ttatctgtca gaggaggggg cgcggcacgg catcgaggcc 2820 atcatagata ctaatggcag tgtgtctgtc aaagtcaaga tgaccatgtt ggaacctaga 2880 caacgcttct gcctgtacga cgacaacaag acatcttcat acatcactgc acaggagtca 2940 cgaacggcaa catatgtcac cttgaagcta ggtggcacca agaatgctaa cacgatatca 3000 ggactggtag cacacgacta caagctagct actacgatat tggcatccac atatgacaag 3060 ggcaggaaga caggacttac actggaggat ctgcaaaagg tcggcggtat cacaggcgga 3120 cagggaatga ctggccgcgg tggaggatcc agctcgggca gaggcggacg aggccggggt 3180 ggcagctcaa ctggtggggc agagaccatc ggtgattcag aataatgagc aaatgtgcca 3240 cgcacacata taggccaaat ggtataacgg acaatgacaa cggactaaga cacagacagg 3300 agatcaggag aagaatgtga gtgactgagc gggggatgga gcaggcaagg ctaggtgagc 3360 actaaccgaa cacaaaccag aaggaaaact ggctaaacca aaacacacat ataatcagcg 3420 gaaacgcaat tcaataggta tacgtgctat tgaccatgag aatattcg 3468 //