ID AB744678; SV 1; linear; genomic RNA; STD; VRL; 4307 BP. XX AC AB744678; XX DT 01-MAR-2013 (Rel. 116, Created) DT 10-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Rosellinia necatrix quadrivirus 1 P2 gene for capsid protein, complete cds, DE segment: 2. XX KW . XX OS Rosellinia necatrix quadrivirus 1 OC Viruses; Riboviria; Quadriviridae; Quadrivirus. XX RN [1] RP 1-4307 RA Suzuki N., Kondo H.; RT ; RL Submitted (28-AUG-2012) to the INSDC. RL Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and RL Resources; Chuo 2-20-1, Kurashiki, Okayama 710-0046, Japan XX RN [2] RC DOI:10.1007/s00705-012-1580-8 RX DOI; 10.1007/s00705-012-1580-8. RX PUBMED; 23277362. RA Lin Y.H., Hisano S., Yaegashi H., Kanematsu S., Suzuki N.; RT "A second quadrivirus strain from the phytopathogenic filamentous fungus RT Rosellinia necatrix"; RL Arch. Virol. 158(5):1093-1098(2013). XX DR MD5; bd4a779cd7093ce217ff65e71b90b547. XX FH Key Location/Qualifiers FH FT source 1..4307 FT /organism="Rosellinia necatrix quadrivirus 1" FT /segment="2" FT /host="Rosellinia necatrix" FT /strain="W1118" FT /mol_type="genomic RNA" FT /country="Japan:Ibaraki, Tsukuba" FT /note="this virus has alternative 5- and FT 3-terminalnucleotides C or U, and G or A, for the FT plus-strand RNA sequence respectively" FT /db_xref="taxon:1000373" FT CDS 42..4115 FT /codon_start=1 FT /transl_table=1 FT /gene="P2" FT /product="capsid protein" FT /db_xref="PDB:5ND1" FT /db_xref="UniProtKB/TrEMBL:M1VMJ0" FT /protein_id="BAM93352.1" FT /translation="MATQMQQRDNGEETLANIKHSARSELKDMNVSGLAGINIQAGGYD FT LTGLSLTDELIAQGLSNVGLLPFEHSRVVLELAEAITVTANNTDMGGSGQYCEQGAWRA FT WLHVGLNMAKHHVRIRSSAAMDFGTHRMMACDPASLDASTISAMSRNVTTATMNAVSRE FT MKAMKALAAGRSRMSQSDIADNNDCRGFAFGVLSRMVMHNSARRHGVVNGRLQELGEND FT ASTADTYLTWELACAHGKGEVAITPVPAAWLDPEAQLTGRERVFSEALARLVDPDVGCV FT HVKIDGVTQNAAENARVHYATRPDPMSWLDDNTGLSADSNAGRISGEHYTLWKGRHSKV FT HLTIQLKQLYHRMSTTAATAEPRADSIVYYLKGFEGLGACAEFLLANSRFGHHSFLPGV FT FGVTADVHEAAYAQNQALFLAGIGDRMPPATFTKAQLATATYALMRRYDISERTCHFAI FT TTIGHMVAQTAVRDLNNGSLSPLPFRVNLSPFLVQGVQFWDMNDTEGSVSVHDMGIGKE FT LLTATYALGAMASLAHVCEQGGTGEEMSAIEVSRFTDVHTVATDLFRKVVMTELGDLKL FT RGSEVTHSSQEALFAQKMKAVWSSMAEGSTRLYNLNQAYGPFVDVQLARIRSSFVRDIG FT ASRQMMDASALIKHAQNVTYDWPQNESGCPVQFIALPVPSTITHYATPAIGTERWFATT FT RLNAAGSKVISEIRWTNGLNSDDRAGVHVFAYGRSTIVSSPLGCAEAMAAMVIAGEHKV FT VRRHTSIARAQSARTANIVAGAVLGARNGDMMTIIRPSTSVASSAVHLRGYIPMAAMNM FT LPITDGDCDLVVADTRTRPGRMSTSPEAHRRGVLASDYHVDIATDGNIRHVAREVYTVA FT DIPTVSERVSGLALRPYERSCVRDASTLHSMLCGAVPLLYGGGEPMKLGDNTPVTNRQA FT LRPPEYNRNPALRMPARFQMGTTACAFTKALGDVRAQMELREGDVVTEEVTEPDTTIVP FT QGSITERVVVGEMTEALIMADQPMFDQDVVQNIMYNSPGIRGTERANIQAELMAAKDWP FT SILQATAKSSHGDIASAKTPYDLIKACKVDWSKVKGETQLKLIMNKIHPEYMTLSRAIS FT AQVDARIVPNVPKSAMSTLLFWACATDMGLHTAVMANLAGLQRTTGFKGGIVYDLEGGA FT NWPATDVRARIIEGWNAHARRIAQSGLISRDLTVMKIQHDMNADDIMALPAHIGDSWVL FT TIGELTANIATDEQSVAYAKDAQSAYYAIDRLRRLVAGREEGVDEILSKAEVMARVLAE FT NKGLADDQALYHREWNRRTMAYVYMTTYLGSLDVEARLGVVSDDAYAERRAEWKAERAK FT LAVPAVSGQGQGRR" XX SQ Sequence 4307 BP; 1137 A; 995 C; 1260 G; 915 T; 0 other; tacgattcaa cccacacatt gatccatcaa ttcgaatcac tatggcgacc caaatgcaac 60 aacgcgacaa cggagaggag accctcgcca acatcaagca ctctgctcgt agcgagctca 120 aggacatgaa cgtgtctggc ttggctggaa tcaacattca ggccggcgga tacgatctca 180 cgggcctatc tctgaccgat gagctgatcg ctcaaggact gagtaacgta ggcctattgc 240 cttttgagca ttcacgagtt gtgcttgaat tggccgaggc tatcacagtc actgcgaaca 300 atacagacat gggtggaagt ggacagtact gtgagcaagg tgcttggagg gcttggctgc 360 acgtcggttt gaatatggcc aagcatcatg tgcgtatcag gtcaagcgcc gctatggact 420 tcggcactca cagaatgatg gcatgtgatc cagctagtct tgatgctagt actataagtg 480 ccatgtccag gaacgtgacg actgccacta tgaacgcagt tagtagagag atgaaggcaa 540 tgaaagcact ggctgcggga cgtagtcgca tgtcacagtc tgacatcgcc gataacaatg 600 actgcagggg attcgcgttc ggcgtgctgt cgcgcatggt catgcacaac tcggcccgca 660 ggcatggagt agtcaatggg agattgcagg aactgggtga aaatgatgct agtactgcgg 720 acacctacct gacttgggag ctggcatgcg cacatggcaa gggagaagtt gcgatcaccc 780 cggttccagc tgcttggcta gatccagagg cgcagctgac tgggcgagaa cgcgtgttca 840 gtgaagcact ggctagactg gtagacccgg acgtcggatg tgtccatgtc aagatagacg 900 gagtaacgca gaacgctgct gagaatgctc gcgtccacta tgctactagg ccagatccga 960 tgtcttggct ggatgacaac acaggcttgt ctgcagactc gaatgccgga cgtatcagtg 1020 gcgagcacta cacgctgtgg aaaggaagac acagcaaagt gcacttgacc atccagctga 1080 agcagttgta ccacagaatg tccactaccg cagcaacggc cgagccacgt gcagatagca 1140 tagtctacta cctgaagggt ttcgaaggac ttggtgcgtg cgcagagttt ctgctggcga 1200 actcgaggtt cgggcaccat tctttcctac ctggtgtgtt tggtgtgact gctgacgtac 1260 atgaagctgc gtatgcacag aatcaggcac tattcctcgc tggaattggg gacaggatgc 1320 ctccggccac attcacgaaa gcgcagctgg ccacggcgac ctatgcactg atgaggagat 1380 atgatatcag tgaacgtacc tgtcattttg cgattacgac gatcgggcac atggtggctc 1440 agacagcggt gagagatctg aacaatggtt ctctaagtcc actgccgttc agggtaaacc 1500 tcagtccctt cctagtccag ggagtacagt tctgggatat gaacgatact gaggggtcgg 1560 tctctgtaca cgacatgggg attggcaagg agttgctgac tgcgacttat gcgttgggcg 1620 ccatggcgag cttggctcac gtttgtgaac aaggaggcac tggtgaagag atgagtgcca 1680 ttgaggtgtc tagattcacg gatgtgcaca cggtcgcaac tgatctgttc aggaaggtgg 1740 taatgacgga gttgggcgat ttgaaactgc gtggcagcga ggtgacgcac agcagccagg 1800 aagcactgtt tgcacagaag atgaaagcag tgtggtcaag tatggctgag ggttcaacga 1860 ggctgtacaa tttaaatcaa gcctatggcc ctttcgttga tgtgcagctc gctaggatcc 1920 ggtcttcatt cgtccgcgac attggagcga gtaggcaaat gatggatgct tcggcactga 1980 tcaaacatgc ccagaatgtg acctacgatt ggccacaaaa tgagagtggc tgcccagtcc 2040 aattcatcgc attgccagta cctagtacga taacgcatta cgcgactcca gcaattggga 2100 ctgagaggtg gtttgctact accagattga atgctgcagg ttccaaggtc atcagtgaga 2160 tcaggtggac taatgggctt aacagcgacg acagagctgg ggtgcatgtg tttgcttacg 2220 gacgaagtac catcgtatcg agtccgcttg gatgtgctga ggctatggcg gctatggtga 2280 ttgcgggcga acacaaggta gttcgacgtc atacaagtat tgctagagcc cagagtgcta 2340 gaacggcgaa cattgtagct ggcgcagtgc ttggcgctag gaatggtgat atgatgacta 2400 tcatcaggcc atctaccagt gtggccagta gcgcagtgca tctgcgtggc tacattccaa 2460 tggcagcgat gaacatgctg cctattacag atggggattg tgaccttgtt gtggcagata 2520 cgcgtacaag gccagggcgg atgtcaacct caccagaagc acatagacgt ggagtgctgg 2580 catcagacta ccacgtggac attgccacag atggtaacat caggcatgtc gcacgcgagg 2640 tctacacagt cgctgacatt cctactgtct ctgagcgagt gtcaggccta gcactacgtc 2700 catacgagcg atcatgtgtg cgtgacgcct ccaccctgca ttccatgttg tgtggggctg 2760 tgccattgct atacggtggc ggtgaaccta tgaaattagg cgataacaca ccagtgacca 2820 acagacaagc tctgagacca cccgagtaca acaggaaccc ggctctgcga atgccagcca 2880 ggttccaaat gggcacaaca gcatgtgcgt tcaccaaagc actaggtgac gtgagggccc 2940 aaatggagtt gagggaaggc gatgtcgtga cggaggaagt aaccgagcct gacacaacca 3000 tcgtgccaca gggtagtatc acagaacgtg tagttgtagg tgagatgact gaggcgctga 3060 ttatggctga ccagcccatg ttcgatcagg atgtagtgca gaacatcatg tacaattcgc 3120 caggcatcag aggcacagaa cgagcaaata tccaggctga gttgatggct gcaaaggatt 3180 ggccaagtat tttgcaagca acagccaagt cttcgcacgg agatattgcg tcagcaaaga 3240 ctccgtatga tttgattaaa gcttgcaaag ttgattggag caaggtcaag ggagagacgc 3300 agcttaaatt gatcatgaac aagatccatc ctgagtatat gacgctgtcg cgagcaatca 3360 gcgcacaagt agatgctagg atcgttccaa atgtgcctaa gagcgccatg agcacactgc 3420 tgttttgggc atgcgccacg gacatgggct tacacacagc cgtgatggcg aaccttgctg 3480 gactacagcg tacgaccggc ttcaaaggag gcatagtgta cgatttggag ggtggtgcaa 3540 attggccagc aactgatgtg cgtgctagaa tcatagaagg atggaatgca cacgcccgca 3600 ggattgcgca gagcggtttg atcagcaggg atctaactgt aatgaagatc cagcacgata 3660 tgaacgctga cgacattatg gcgttgcccg cccacattgg cgactcatgg gtactgacga 3720 tcggtgaact aactgcaaat attgcgacag atgaacaatc ggtggcatac gcaaaagacg 3780 ctcaaagtgc ctactacgcc atcgataggt tgcggcgtct ggttgctgga cgcgaggaag 3840 gtgtagatga gatcttgtca aaggctgaag tgatggcgag agtattggca gaaaacaaag 3900 gtcttgcgga tgaccaggcc ctctaccaca gagagtggaa cagacgcact atggcgtacg 3960 tgtacatgac tacctacttg ggtagcctag acgtggaggc caggctaggt gtggtatctg 4020 atgacgcata cgcagaacgt agggccgaat ggaaagcaga gagagccaaa cttgcagtgc 4080 cagctgtctc cggacaagga caaggacgtc gctaaggcaa tagatgcacg gcggctacag 4140 accacaagca acgatgaacg taagatatga acacgcggcg ggataggcgg tgactgaagg 4200 tgcggacgag aacaacaagc agaaggaaaa ctgtgcaaac caaaacatac atattagcgg 4260 aaacgcaatt caatagatat acgtgctatt gatcttgaga atattca 4307 //