ID AB744677; SV 1; linear; genomic RNA; STD; VRL; 4971 BP. XX AC AB744677; XX DT 01-MAR-2013 (Rel. 116, Created) DT 10-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Rosellinia necatrix quadrivirus 1 P1 gene for hypothetical protein, DE complete cds, segment: 1. XX KW . XX OS Rosellinia necatrix quadrivirus 1 OC Viruses; Riboviria; Quadriviridae; Quadrivirus. XX RN [1] RP 1-4971 RA Suzuki N., Kondo H.; RT ; RL Submitted (28-AUG-2012) to the INSDC. RL Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and RL Resources; Chuo 2-20-1, Kurashiki, Okayama 710-0046, Japan XX RN [2] RC DOI:10.1007/s00705-012-1580-8 RX DOI; 10.1007/s00705-012-1580-8. RX PUBMED; 23277362. RA Lin Y.H., Hisano S., Yaegashi H., Kanematsu S., Suzuki N.; RT "A second quadrivirus strain from the phytopathogenic filamentous fungus RT Rosellinia necatrix"; RL Arch. Virol. 158(5):1093-1098(2013). XX DR MD5; 47941b927187f2898da2e7bb18febb5f. XX FH Key Location/Qualifiers FH FT source 1..4971 FT /organism="Rosellinia necatrix quadrivirus 1" FT /segment="1" FT /host="Rosellinia necatrix" FT /strain="W1118" FT /mol_type="genomic RNA" FT /country="Japan:Ibaraki, Tsukuba" FT /note="this virus has alternative 5- and FT 3-terminalnucleotides C or U, and G or A, for the FT plus-strand RNA sequence respectively" FT /db_xref="taxon:1000373" FT CDS 40..4848 FT /codon_start=1 FT /transl_table=1 FT /gene="P1" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:M1V1Z1" FT /protein_id="BAM93351.1" FT /translation="MQSTRKQQVKQAYQANKVRIDAAEAAILNRWPRAYQCMEVKRRCV FT ERRGETLGADETDRSWLPIMTPPDVEQDEREDAPYKLRLDGRGYNGMPWLELAGEKYRS FT VTRDIDAKLVNTNLAHLIRPRILGSGADGTMTISIASRVTVSVTGIELQQPLVGEYLRH FT NTVYITSCIPTVKKIEMSSEMEEALITTDTGGLMWHLISGLVQAMATGQLVQRSGRYYS FT QITGVSVSNSHITDVSTLGVSRVTRGSGVLASERMARRTVKSTFDPQTSKYLVVKKYED FT VARAVMTIKRLYPEIARQWAAYDVDYDCGSVSIAANEDIFVKAIARLLGSEEEREMTLS FT CLMQNVLAYYKVEPLSTEGLLEDVNRELYYPNKVVYGEHFLQACDDSVTVANVMEIVAA FT QVLTAEVTLTRAINAVNELVPGEKYDYKKYLDNLRSSMDETCKRGGREDMPGVPLDLYS FT ICTTAVNFEDSMTDYYSSFSYWAMPLHITGNADAKIRAGYRSTKEIVTSTNPAHISLRA FT MIEANRVDVAAHASEISSENSENEFEIAGGEVVSLKDALMPRPTLGALARSIHWADKLS FT WFDPGVEGMCRIXDGKLEAAAYDAVAIASHLKMAKLELAVDSGHKLGVVSNRHEYGFYT FT RSTKTYSLPVYESADRVLLHNGRANINNLVTWACKQTKDIPGHVVNLKFAVRLVGLNVA FT AGIVRDLRTQADIRDDRDTRLIAGCTLTPQVVGLCEDGMKDIVSHARVAIGRLINGVNV FT NVRGLKKRQFTMHRLLEYKTGKVYWPKMLCELGQNVYSAVVQARAYGMVVPAKVFSMLN FT SIATDHHWEEALELKQAGITTNVLLVAQGLLKKSPREAGDAGEIMSWFSALGLLATLSK FT LVAVNSSTINYGSSLPTAIGFLGSLTCTFDTSCDGLAMWIAVVAAQEAMGIHARPRLAA FT TVVANSIGWYNAMHHTVAGTDFGPVINNMIRDSFTVTEMRICEPSGGCMHALRCDLAGG FT DSGMHTCMLCRHMVSCTWCQVRVGLRQEYPSERAGDGDYENDEMSVSAADSTTQFMSDE FT EFAKWAADEQYTMDWAEEELEVSELHERSSVIKNATEHTIAPAADATEEDDAEAAYEID FT DDSESGENDLSHNNGPDFWDKGKYPMDTVEHDANEPDSRFDMPAEGEVEVETTGIAEQD FT MAEDREVWAAINRDTRQGETSGADKLLPTGRPPHTISTALTYYSARPSKMQITSGVMPA FT PDNYKPVMPDIPYGMPQAEWFSLKEAEKFRQIEEAVAVGDIQKLLALGGSREMYHCEVC FT KLAARNMDKPERKFIADNGWLDIVHTQSFAQWILDNQELDQRFDEGWGIPMKVKEWALM FT RDAHRANFAIVPTAMVQTQMMGWGDLQTRTRINLGRLPYTTLWAHAERPESEPIELGVV FT HDLNVRDYVIDGWYDPAHTTYCEFDPDELAYMAKHPGMVNPNRTAAGVSGISWRGPKQF FT SIWATFHDTRSEAEKQRAPLKLDKRIALGILCNWDLTTKNNWMLISGHHIGDCVHARLK FT VFNRPGVDGEVGDEEAIVEIIHVCKARAPTISIYAYARMAEIGYPREKWQDWQANIYAS FT GQLDEMRAALPQYISDDVLLGEE" XX SQ Sequence 4971 BP; 1360 A; 1128 C; 1432 G; 1049 T; 2 other; cacgattcaa cccactacta acttaaagta tcgttgaaca tgcaatccac tcgtaagcaa 60 caagtgaaac aggcgtacca ggctaataaa gtgaggattg atgctgctga agcagctatc 120 ttgaacaggt ggccgagagc ctatcaatgc atggaggtga aacgcagatg cgtcgagcgc 180 cgtggagaaa ccttaggcgc agacgagact gatagatctt ggctgccgat catgacgccg 240 ccggatgtag agcaagatga gcgagaggac gcgccatata aattacggct tgacggaagg 300 ggctacaatg gaatgccttg gctggaattg gctggcgaga aatatcgctc tgtcactcga 360 gacattgacg ccaaactggt caacactaac ttggcacatc tgatccggcc acgcatcttg 420 ggttcaggcg cagacggcac catgactata agtatcgcat cgcgagtgac tgtcagcgtg 480 acgggcatcg agctccagca gcctctggtt ggtgagtatc tacgccataa cacagtgtac 540 atcactagct gcatcccgac agtcaagaaa atcgagatgt cgagcgagat ggaggaagca 600 ctgatcacca ccgacactgg cgggctgatg tggcatttga tctccgggct agtacaagcc 660 atggcgacag gccaactcgt ccagcgatca ggcagatact acagtcaaat cactggcgtc 720 tcagtctcta actcgcacat taccgatgtt tctacgttgg gtgtgagtcg tgtgactagg 780 ggctcaggtg tactggccag tgagcgcatg gccagacgca ctgtcaagtc caccttcgat 840 ccgcagacga gcaaatactt ggttgtgaag aagtatgaag atgtggccag agcggtgatg 900 accatcaaac gcttataccc agaaatcgca cgtcaatggg cggcatacga tgtcgactat 960 gactgcggct ctgtctctat cgctgcgaat gaggatatct tcgtgaaagc tattgctagg 1020 ctgctgggta gtgaggaaga gcgtgagatg accttgtcgt gcctgatgca gaacgtgttg 1080 gcttattaca aagtggagcc gctcagtaca gaaggcttgc tagaggacgt gaatcgtgag 1140 ttgtactatc ctaacaaggt agtgtatggc gaacatttcc tgcaagcgtg cgacgattct 1200 gtgacagttg caaatgtcat ggagattgtg gcggcgcaag tgctgacagc ggaggtaact 1260 ttaacacgag ccatcaatgc tgtgaaygag ttggtgcccg gagagaagta cgactacaag 1320 aaatacttgg acaacctgcg ctccagcatg gacgaaacgt gtaagcgtgg gggccgagag 1380 gacatgcccg gggtgcctct ggacttgtac agcatctgta caactgccgt caatttcgaa 1440 gattcaatga cggattacta cagtagtttc agctattggg cgatgccttt gcacatcaca 1500 ggcaatgcag atgctaagat ccgtgcaggc tacagaagca caaaggagat agtcacttcg 1560 accaatccag cacacatcag cttgagagca atgattgaag caaatcgggt tgacgttgcc 1620 gcacacgcat ctgaaatatc tagtgagaat tcagagaatg agttcgaaat agctggggga 1680 gaagtggtca gtctgaaaga tgcactgatg ccaagaccta ctctgggtgc tttagctaga 1740 tctattcact gggcagataa gttgagctgg tttgatccag gtgtcgaagg catgtgcaga 1800 attrtagatg gcaagcttga agctgcagcg tatgatgccg tggctattgc ttcacactta 1860 aaaatggcca agctcgaact tgcggtcgat agcggtcaca aattaggagt ggtatcgaac 1920 cggcacgagt atgggttcta caccaggtcc accaagacgt attcgttgcc agtttacgag 1980 tcagcggatc gagtgttgct gcataacggg cgcgcgaaca tcaacaatct ggtgacctgg 2040 gcttgcaagc agacgaaaga cattccaggg cacgttgtca atttgaagtt tgcggtcagg 2100 ctggtaggcc taaatgttgc tgcaggtata gtaagagact tgcgcaccca ggcagacatc 2160 cgagatgacc gggacacaag gctgatagca ggttgtacat taacaccaca agtcgtgggg 2220 ctgtgcgaag atggaatgaa agacatcgtc tcgcatgctc gtgtagcgat tgggcgactg 2280 atcaatggcg tgaatgtgaa tgtgcgcggc ctaaagaagc gacagtttac tatgcacagg 2340 ttgctcgagt acaagacggg caaggtatac tggcccaaga tgctgtgcga gctagggcag 2400 aacgtgtatt ctgcggtggt acaagcaaga gcatatggca tggttgtgcc ggccaaggtc 2460 ttttcaatgc tcaactcgat agcgaccgac catcactggg aggaagcgtt agaactgaag 2520 caagccggca ttaccaccaa cgtgctgctc gtcgctcagg gactgctcaa gaagagtccg 2580 agagaggcag gtgacgcagg ggagatcatg agttggttct cagcgctagg cttgctggcc 2640 acactatcaa agctggtggc tgttaactcg agcaccatca actatggcag ctctctgcca 2700 acagcaatag ggttcctggg ctcactgacc tgtacgttcg acacctcatg tgatggcttg 2760 gcaatgtgga tagctgtagt tgctgcacaa gaggcaatgg gaatacatgc tagacctaga 2820 ttggcggcca ctgtggttgc aaattccatt ggttggtata acgcgatgca tcacactgtc 2880 gctggtaccg acttcggtcc tgttataaac aacatgatac gcgacagctt tacggtcact 2940 gaaatgagga tctgtgagcc atcaggtggc tgcatgcacg cattgcgctg cgacctagct 3000 ggaggtgaca gcggcatgca cacctgtatg ctttgtaggc acatggtgtc atgcacctgg 3060 tgccaggtaa gagtcggttt gcgccaggag tatccaagtg agcgcgcagg ggacggtgat 3120 tacgaaaacg acgagatgtc agtgtcagcc gccgatagca ccacccagtt catgagcgac 3180 gaagaattcg ccaaatgggc agctgacgag caatacacga tggattgggc cgaagaggaa 3240 ctagaggtat cagagctaca tgagaggtcc agcgtcatca aaaatgccac agagcatact 3300 atcgcacctg cagcagatgc gactgaggag gacgatgcag aggcggcgta tgagatagac 3360 gatgatagtg agtcgggcga gaatgatctg agccataata atgggcctga cttctgggac 3420 aaaggcaagt atccaatgga cacagtggag catgatgcta acgagcccga cagtagattt 3480 gacatgcctg ctgaaggtga ggtggaagtt gaaaccacag gcattgctga gcaagatatg 3540 gcagaggaca gagaggtgtg ggctgcaata aatcgcgaca cgaggcaagg tgagacatcg 3600 ggtgcagata aattgcttcc gaccgggagg ccgccacaca ctattagcac tgctctgaca 3660 tattactcgg cgcggccgag caagatgcag ataactagcg gcgtgatgcc agctccggat 3720 aactacaagc ctgtgatgcc cgacatacca tatggcatgc cacaagcaga gtggtttagt 3780 ctgaaggagg ccgagaaatt cagacaaata gaggaggccg tagctgttgg cgacatccaa 3840 aaactcttgg cactgggcgg cagtcgcgaa atgtaccact gcgaagtgtg caaattggct 3900 gctaggaaca tggacaaacc ggaacggaaa ttcattgctg acaacggctg gctggacata 3960 gtacacactc aaagctttgc gcagtggata ttagacaatc aggagctgga tcagaggttc 4020 gacgagggct ggggcatccc tatgaaagtc aaggagtggg cgctgatgcg cgatgcccat 4080 agagcgaact ttgcaatagt gcccacagcc atggtccaga cacaaatgat gggctggggc 4140 gatttgcaga cgcgtacgcg cataaatctg ggtagactac cttacactac gttatgggcg 4200 catgctgaaa ggcctgaaag cgagccaatc gagttggggg tggttcacga cttaaatgtc 4260 cgtgattacg tgatcgatgg atggtacgac ccagcacaca ccacatattg tgagttcgac 4320 ccagatgagc ttgcttacat ggcgaagcac ccaggcatgg tgaacccgaa ccgtactgca 4380 gccggtgtta gtggtatcag ctggaggggg ccaaagcagt tctctatctg ggctaccttc 4440 catgacactc gcagtgaagc cgaaaagcag cgtgcaccgt tgaagctcga caaacgaatt 4500 gctctaggca tcctatgcaa ctgggacctg accacgaaaa acaactggat gttgataagt 4560 ggccaccaca tcggcgactg tgtgcatgcg cgcttgaaag tattcaacag gccaggtgtc 4620 gatggagaag ttggtgatga agaagcaatc gtagagatta tccacgtgtg caaggccaga 4680 gcaccaacta tttcgatata cgcatacgcg agaatggcag aaatcggcta tccgcgcgag 4740 aaatggcaag attggcaggc caacatctat gcatcaggcc aattggatga aatgagggcg 4800 gcattgccac agtacatctc agatgatgtc ttgctaggag aagagtaaac acacaacata 4860 cgtaaactgc agccgttcag tgcagtataa tatctgacgg gaaacaaaca atacatatta 4920 gcggaaacgc aattcaatag atatacgtgc tattgatctt gagaatattc g 4971 //