ID   AB732965; SV 1; linear; genomic RNA; STD; VRL; 1044 BP.
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AC   AB732965;
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DT   03-OCT-2012 (Rel. 114, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE   Clover yellow vein virus gene for polyprotein, partial cds, isolate: MB3.
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KW   .
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OS   Clover yellow vein virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1044
RA   Choi S., Uyeda I.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Contact:Sun Hee Choi Hokkaido University, Graduate School of Agriculture;
RL   kita9, nishi9, kita-ku, sapporo 060-8589, Japan
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RN   [2]
RC   DOI:10.1128/JVI.00065-13
RX   DOI; 10.1128/JVI.00065-13.
RX   PUBMED; 23616656.
RA   Choi S.H., Hagiwara-Komoda Y., Nakahara K.S., Atsumi G., Shimada R.,
RA   Hisa Y., Naito S., Uyeda I.;
RT   "Quantitative and Qualitative Involvement of P3N-PIPO in Overcoming
RT   Recessive Resistance against Clover Yellow Vein Virus in Pea Carrying the
RT   cyv1 Gene";
RL   J. Virol. 87(13):7326-7337(2013).
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DR   MD5; 96e95482314ab6f21737b4b361e504f0.
DR   EuropePMC; PMC3700270; 23616656.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1044
FT                   /organism="Clover yellow vein virus"
FT                   /host="Pisum sativum, Vicia faba"
FT                   /isolate="MB3"
FT                   /mol_type="genomic RNA"
FT                   /note="cyv1 resistance breaking isolate"
FT                   /db_xref="taxon:12198"
FT   mat_peptide     1..1044
FT                   /product="P3"
FT   CDS             <1..>1044
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="UniProtKB/TrEMBL:K0J6K6"
FT                   /protein_id="BAM48931.1"
FT                   /translation="GKSLTGQVIQFDTKMLISSIYRPRQMERIINEEPFVLVLAMQSPS
FT                   VLLALFNSASLEKAVEVWLHKDMRVSHVMTMLALLAAKVSAAKMVNLQMEIIEASASHF
FT                   LAAMDTIHKPMHSINTANIFLMNLEEGRSTDRTIDELGFHSLKKSSQVLMEKIWAEDLE
FT                   QQWLGLRLSQKFYLIRQSWKQRAKYSKILAQRDELGASDKFSASLRLSATSIKNQAISC
FT                   RKRMVATSKKCLFSVQKMVAMQALRVFKRCMSNMVDVLNVLATITLLMGILSQVRSHIK
FT                   TVTSYKRVSKEAKVQDDLYRINEYYELLKARDRYTVDEFRSKLESLNPELLETFDEYYK
FT                   GPKWVVME"
FT   mat_peptide     462..671
FT                   /product="PIPO"
XX
SQ   Sequence 1044 BP; 345 A; 198 C; 247 G; 254 T; 0 other;
     ggcaaatcat tgacagggca ggtgatacag tttgacacaa aaatgttaat ctcaagtatt        60
     taccgaccaa gacagatgga aaggatcatc aatgaagaac cctttgtgct agttctagca       120
     atgcaatcac catcagttct tttagccttg ttcaatagtg cttcgctaga gaaagccgtg       180
     gaggtctggc tgcacaagga tatgcgcgtt tcacatgtga tgacaatgct tgccctcctg       240
     gcagcaaaag taagtgcggc caagatggta aatttacaga tggagataat agaagctagc       300
     gctagccact ttctcgctgc aatggacacc attcacaagc caatgcattc cattaacaca       360
     gcaaacattt tcttgatgaa cttagaagaa gggagatcaa ctgatagaac aattgatgaa       420
     cttggttttc actctttgaa aaagtctagc caggtactca tggaaaaaat ctgggcagag       480
     gatttagagc agcaatggct aggtttaaga ttgtcacaaa agttttattt aataaggcag       540
     tcatggaagc agcgggcaaa gtattccaaa atattagccc agagagacga gctaggtgcc       600
     agcgacaagt tcagcgcatc actcagattg tcagcaacaa gcatcaaaaa tcaagcaatc       660
     agttgcagga agagaatggt cgcaacaagt aagaagtgtt tgttcagtgt gcagaagatg       720
     gtagcaatgc aagccttaag ggtgttcaaa cgatgcatga gtaatatggt ggatgttctc       780
     aacgtgttag caacaataac gctcctgatg ggcatcctga gtcaagtgag atcccacatc       840
     aaaactgtca catcgtacaa gcgcgtttca aaggaagcaa aagttcaaga tgacttgtac       900
     agaatcaatg agtattatga gttattgaaa gctcgtgata ggtacacagt ggatgagttt       960
     cgcagcaaac tggaatccct aaacccagaa ctcctagaga cttttgatga gtattacaag      1020
     ggaccaaagt gggttgtcat ggag                                             1044
//