ID   AB732964; SV 1; linear; genomic RNA; STD; VRL; 1044 BP.
XX
AC   AB732964;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE   Clover yellow vein virus gene for polyprotein, partial cds, isolate: N.
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KW   .
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OS   Clover yellow vein virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1044
RA   Choi S., Uyeda I.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Contact:Sun Hee Choi Hokkaido University, Graduate School of Agriculture;
RL   kita9, nishi9, kita-ku, sapporo 060-8589, Japan
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RN   [2]
RC   DOI:10.1128/JVI.00065-13
RX   DOI; 10.1128/JVI.00065-13.
RX   PUBMED; 23616656.
RA   Choi S.H., Hagiwara-Komoda Y., Nakahara K.S., Atsumi G., Shimada R.,
RA   Hisa Y., Naito S., Uyeda I.;
RT   "Quantitative and Qualitative Involvement of P3N-PIPO in Overcoming
RT   Recessive Resistance against Clover Yellow Vein Virus in Pea Carrying the
RT   cyv1 Gene";
RL   J. Virol. 87(13):7326-7337(2013).
XX
DR   MD5; c0558799b763aaa1a374c413e7e16c58.
DR   EuropePMC; PMC3700270; 23616656.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1044
FT                   /organism="Clover yellow vein virus"
FT                   /host="Pisum sativum, Vicia faba"
FT                   /isolate="N"
FT                   /mol_type="genomic RNA"
FT                   /note="cyv1 resistance breaking isolate"
FT                   /db_xref="taxon:12198"
FT   mat_peptide     1..1044
FT                   /product="P3"
FT   CDS             <1..>1044
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="UniProtKB/TrEMBL:K0J203"
FT                   /protein_id="BAM48930.1"
FT                   /translation="GKSLTGQVIQFDTKMLISSIYRPRQMERIINEEPFVLVLAMQSPS
FT                   VLLALFNSASLEKAVEVWLHKDMRVSHVMTMLALLAAKVSAAKMVNLQMEIIEASASHF
FT                   LAAMDTIHKPMHSINTANIFLMNLEEGRSTDRTIDELGFHSLKKSSQVLMEKIWAEDLE
FT                   QQWLGLRLSQKFYLIRQSWKQRAKYSKILAQRDELGASDKFSASLRLSATSIKNQAISC
FT                   RNKMVATSKKCLFSVQRMVAMQALRVFKRCMRNMVDVLNVLATITLLMGILSQVRSHIK
FT                   TVTSYKRVSKEAKVQGDLYRINDYYELLKARDRYTVDEFRSKLESLNPELLETFDEYYK
FT                   EPKWFVME"
FT   mat_peptide     462..671
FT                   /product="PIPO"
XX
SQ   Sequence 1044 BP; 351 A; 198 C; 241 G; 254 T; 0 other;
     ggcaaatcat tgacagggca agtaatacag tttgacacaa agatgttaat ctcaagtatt        60
     taccgaccaa gacagatgga gaggatcatc aatgaagagc cctttgtgct agttttagca       120
     atgcaatcac catcagttct tttagccttg ttcaatagtg cctcgctaga gaaagccgtg       180
     gaggtctggc tacacaaaga catgcgcgtt tcacatgtaa tgacgatgct tgccctcctg       240
     gcagcaaaag taagtgcagc caagatggta aatttacaga tggagataat agaagctagc       300
     gctagccact ttcttgctgc aatggatacc attcacaagc caatgcattc catcaacaca       360
     gcgaatattt tcttaatgaa cttggaagaa gggagatcaa ctgacagaac aattgatgaa       420
     ctcggattcc actctttgaa aaagtctagc caagtactca tggaaaaaat ctgggcagag       480
     gatttagagc agcaatggct aggtttaaga ttgtcacaaa agttttattt aataaggcag       540
     tcatggaagc agcgggcaaa gtattccaaa atattagccc agagagacga gctaggtgcc       600
     agcgacaagt tcagcgcatc actcagattg tcagcaacaa gcatcaagaa tcaagcaatc       660
     agttgcagga ataaaatggt cgcaacaagc aagaagtgtt tgttcagtgt acagagaatg       720
     gtagcaatgc aagccttaag ggtgttcaaa cgatgcatga gaaatatggt ggatgttctc       780
     aacgtgttag caacaataac actcctgatg ggcattctga gccaagtgag atcccacatc       840
     aaaactgtta catcgtacaa gcgcgtttca aaggaagcaa aagttcaagg tgacttgtac       900
     agaattaatg attattatga gttgttgaaa gctcgtgata ggtatacagt ggatgagttc       960
     cgcagtaagc tggaatcact gaacccagaa ctcctagaga cttttgatga gtactacaaa      1020
     gaaccaaagt ggtttgtcat ggaa                                             1044
//