ID   AB732963; SV 1; linear; genomic RNA; STD; VRL; 1044 BP.
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AC   AB732963;
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DT   03-OCT-2012 (Rel. 114, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE   Clover yellow vein virus gene for polyprotein, partial cds, isolate: I89-1.
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KW   .
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OS   Clover yellow vein virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1044
RA   Choi S., Uyeda I.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Contact:Sun Hee Choi Hokkaido University, Graduate School of Agriculture;
RL   kita9, nishi9, kita-ku, sapporo 060-8589, Japan
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RN   [2]
RC   DOI:10.1128/JVI.00065-13
RX   DOI; 10.1128/JVI.00065-13.
RX   PUBMED; 23616656.
RA   Choi S.H., Hagiwara-Komoda Y., Nakahara K.S., Atsumi G., Shimada R.,
RA   Hisa Y., Naito S., Uyeda I.;
RT   "Quantitative and Qualitative Involvement of P3N-PIPO in Overcoming
RT   Recessive Resistance against Clover Yellow Vein Virus in Pea Carrying the
RT   cyv1 Gene";
RL   J. Virol. 87(13):7326-7337(2013).
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DR   MD5; da04babc9d3d97245124e0e4fa0a5148.
DR   EuropePMC; PMC3700270; 23616656.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1044
FT                   /organism="Clover yellow vein virus"
FT                   /host="Pisum sativum, Vicia faba"
FT                   /isolate="I89-1"
FT                   /mol_type="genomic RNA"
FT                   /note="cyv1 resistance breaking isolate"
FT                   /db_xref="taxon:12198"
FT   mat_peptide     1..1044
FT                   /product="P3"
FT   CDS             <1..>1044
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="UniProtKB/TrEMBL:K0J2A7"
FT                   /protein_id="BAM48929.1"
FT                   /translation="GKSLTGQVIQFDTKMLISSIYRPRQMERIINEEPFVLVLAMQSPS
FT                   VLLALFNSASLEKAVEVWLHKDMRVSHVMTMLALLAAKVSAAKMVNLQMEIIEASASHF
FT                   LAAMDTIHKPMHSINTANIFLMNLEEGRSTDRTIDELGFHSLKKSSQVLMEKIWAEDLE
FT                   QQWLGLRLSQKFYLIRQSWKQRAKYSKILAQRDELGASDKFSASLRLSATSIKNQAISC
FT                   RKRMVATSKKCLFSVQKMVAMQALRVFKRCMSNMVDVLNVLATITLLMGILSQVRSHIK
FT                   TVTSYKRVSKEAKVQDDLYRINEYYELLKARDRYTVDEFRSKLESLNPELLETFDEYYK
FT                   EPKWFVME"
FT   mat_peptide     462..689
FT                   /product="PIPO"
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SQ   Sequence 1044 BP; 346 A; 198 C; 247 G; 253 T; 0 other;
     ggtaaatcat taacagggca agtgatacag tttgacacaa aaatgttaat ctcaagtatc        60
     taccgaccaa gacagatgga gaggatcatc aatgaagagc cctttgtgct agttctagca       120
     atgcaatcac catcagttct tttggcattg ttcaatagtg cctcgctaga gaaagccgtg       180
     gaggtttggc tgcacaagga catgcgcgtt tcacatgtga tgacaatgct tgccctcctg       240
     gcagcaaaag tgagtgcagc caagatggtg aatttacaaa tggagataat agaagctagt       300
     gctagccact ttctcgctgc aatggacacc attcacaagc caatgcattc catcaacaca       360
     gcgaacattt tcttgatgaa cttagaagaa gggagatcaa ctgacagaac aattgatgaa       420
     cttgggttcc actctttgaa aaagtctagt caagtactca tggaaaaaat ctgggcagag       480
     gatttagagc agcaatggct aggtttaaga ttgtcacaaa agttttattt aataaggcag       540
     tcatggaagc agcgggcaaa gtattccaaa atattagccc agagagacga gctaggtgcc       600
     agcgacaagt tcagcgcatc actcagattg tcagccacaa gcatcaaaaa tcaagcaatc       660
     agttgcagga agagaatggt tgcaacaagt aagaagtgtt tgttcagtgt gcagaagatg       720
     gtagcaatgc aagccttaag ggtgttcaaa cgatgcatga gtaatatggt ggatgttctc       780
     aacgtgttag caacaataac gctcctgatg ggcatcctga gtcaagtgag atcccacatc       840
     aaaactgtca catcgtacaa gcgcgtttca aaggaagcaa aagttcaaga tgacttgtac       900
     agaatcaatg agtattatga gttattgaaa gctcgtgata ggtacacagt ggatgagttt       960
     cgcagcaaac tggaatcact aaacccagaa ctcctagaga cttttgatga gtattacaag      1020
     gaaccaaagt ggtttgtcat ggag                                             1044
//