Dbfetch
ID AB730586; SV 1; linear; genomic DNA; STD; VRL; 1220 BP. XX AC AB730586; XX DT 21-JUN-2012 (Rel. 113, Created) DT 21-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Tomato yellow leaf curl virus V1, C3, C2 genes for coat protein, C3 DE protein, C2 protein, partial and complete cds, isolate: Kure. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1220 RA Matsuura S., Hoshino S.; RT ; RL Submitted (18-JUN-2012) to the INSDC. RL Contact:Shohei Matsuura Hiroshima prefectural technology research RL institute, Agricultural technology research center, Environment research RL division; Hachihonmatsu Hara 6869, Higashihiroshima, Hiroshima 739-0151, RL Japan XX RN [2] RA Matsuura S.; RT "Tomato yellow leaf curl virus isolate Kure"; RL Unpublished. XX DR MD5; 8b0a326955909d4f305c14321c768daa. XX FH Key Location/Qualifiers FH FT source 1..1220 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="Kure" FT /mol_type="genomic DNA" FT /country="Japan:Hiroshima, Kure, Kurahashi" FT /isolation_source="isolated from cultivated tomato plant in FT Hiroshima" FT /collection_date="30-May-2012" FT /db_xref="taxon:10832" FT CDS <1..695 FT /codon_start=3 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:I7GQ35" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I7GQ35" FT /protein_id="BAM24689.1" FT /translation="SRAAVPIVQGTNKRRSWTYRPMYRKPRIYRMYRSPDVPRGCEGPC FT KVQSYEQRDDIKHTGIVRCVSDVTRGSGITHRVGKRFCVKSIYFLGKVWMDENIKKQNH FT TNQVMFFLVRDRRPYGSSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHATVIGG FT PSGMKEQALVKRFFKINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATMKIRI FT YFYDSISN" FT CDS complement(692..1096) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:I7H7J9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I7H7J9" FT /protein_id="BAM24690.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRSIDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(837..>1220) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:I7H1H1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I7H1H1" FT /protein_id="BAM24691.1" FT /translation="SHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYLHLNCNNHGFT FT HRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQHQEGHGDS FT QMFSQLPNLDDITASDWSFLKSI" XX SQ Sequence 1220 BP; 355 A; 216 C; 270 G; 379 T; 0 other; gcagccgtgc tgctgtcccc attgtccaag gcacaaacaa gcgacgatca tggacgtaca 60 ggcccatgta ccgaaagccc agaatataca gaatgtatcg aagccctgat gttccccgtg 120 gatgtgaagg cccatgtaaa gtccagtctt atgagcaacg ggatgatatt aagcatactg 180 gtattgttcg ttgtgttagt gatgttactc gtggatctgg aattactcac agagtgggta 240 agaggttctg tgttaaatcg atatattttt tagggaaagt ctggatggat gaaaatatca 300 agaagcagaa tcacactaat caggtcatgt tcttcttagt ccgtgataga aggccctatg 360 gaagcagccc aatggatttt ggacaggttt ttaatatgtt cgataatgag cccagtaccg 420 caaccgtgaa gaatgatttg cgggataggt ttcaagtgat gaggaaattt catgctacag 480 ttattggtgg accctctgga atgaaggaac aggcattagt taagagattt tttaaaatta 540 acagtcatgt aacttataat catcaggagg cagccaagta cgagaaccat actgaaaacg 600 ccttgttatt gtatatggca tgtacgcatg cctctaatcc agtgtatgca actatgaaaa 660 tacgcatcta tttctatgat tcaatatcaa attaataaaa tttatatttt atatcatgag 720 tttctgttac atttattgtg ttttcaagta catcatacaa tacatgatct attgatctga 780 ttacattgtt aatggaaatt acaccaagac tatctaaata cttaagaact tcatatctaa 840 atactcttaa gaaatgacca gtctgaggct gtaatgtcgt ccaaattcgg aagttgagaa 900 aacatttgtg aatccccatg accttcctga tgttgtggtt gaatcttatc tgaatggaaa 960 tgatgtcgtg gttcattaga aatggcctct ggctgtgttc tgttatcttg aaatagaggg 1020 gattgtttat ctcccagata aaaacgccat tctctgcctg aggagcagtg atgagttccc 1080 ctgtgcgtga atccatgatt attgcagttg aggtggagat agtatgagca gccacagtct 1140 aggtctatac gcttacgcct tattggtttc ttcttggcta tcttgtgttg gaccttgatt 1200 gatacttgcg aacagtggct 1220 //