ID AB720875; SV 1; linear; genomic RNA; STD; VRL; 4824 BP. XX AC AB720875; XX DT 13-JUL-2012 (Rel. 113, Created) DT 18-SEP-2013 (Rel. 118, Last updated, Version 3) XX DE Grapevine leafroll-associated virus 4 p23, CP, p60, HSP70 genes for 23kDa DE protein, coat protein, 60kDa protein, heat shock protein 70, partial and DE complete cds, strain: Ru2. XX KW . XX OS Grapevine leafroll-associated virus 4 OC Viruses; Riboviria; Closteroviridae; Ampelovirus. XX RN [1] RP 1-4824 RA Ito T., Nakaune R., Nakano M., Suzaki K.; RT ; RL Submitted (15-MAY-2012) to the INSDC. RL Contact:Takao Ito National Institute of Fruit Tree Science, Grape and RL Persimmon Research Station; Akitsu, Higashihiroshima, Hiroshima 739-2494, RL Japan XX RN [2] RC DOI:10.1007/s00705-012-1444-2 RX DOI; 10.1007/s00705-012-1444-2. RX PUBMED; 22926688. RA Ito T., Nakaune R., Nakano M., Suzaki K.; RT "Novel variants of grapevine leafroll-associated virus 4 and 7 detected RT from a grapevine showing leafroll symptoms"; RL Arch. Virol. 158(1):273-275(2013). XX DR MD5; 72dfeb2209669e3523e4076f3e3a23b1. XX FH Key Location/Qualifiers FH FT source 1..4824 FT /organism="Grapevine leafroll-associated virus 4" FT /host="Vitis vinifera cv. Chiliaki Chjornyj" FT /strain="Ru2" FT /mol_type="genomic RNA" FT /country="Japan:Hiroshima, Akitsu" FT /db_xref="taxon:70177" FT CDS <1..1564 FT /codon_start=2 FT /transl_table=1 FT /gene="HSP70" FT /product="heat shock protein 70" FT /db_xref="GOA:I7H469" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:I7H469" FT /protein_id="BAM29346.1" FT /translation="LCFSPGRGIDGCVPESDTIFIPTVVGLRADGTYTIGLGALQESGL FT TVYRDIKRYFGMNRYNEREYREKLKPTFEVVVDEWSVAIGPVSGEKGKARSVIALACLF FT VSALAKIAVRVTNSPISISVCSVPAEYSSYMRSFIFESCSLAKISVQAVVNEPTAAGLS FT AFVNIDKRDLKYMVVYDFGGGTFDASLMVVGSAFVCVIDSLGDNYLGGRDVDNALAAAV FT CDQLKLTSEAVDPFAMEALKIDLVREPSKAVRDILTKNGEIKQISFSGEDFKNLCKPFV FT SRAAALVEKLLRRRNVDSCVAVLIGGSAVLPGVRNSIASLRGVSQVLFDISTYRAAVAI FT GAAIYAQTFSGASRYRLIDCVSNSLSDERLPLKAVAVFPKGHPIPSTVTVDFKMPSYDT FT GLVLHEGESAFINRNARTFSASLSTKVFPPKQTYKQVFSISEDGRLSATMNGIELRNTV FT VQKSPPANQYSEVFVSSDDKRIGPEVADIKSFYAKLLKSQALISSSLNERKRVYLEHGI FT VCD" FT CDS 1545..3185 FT /codon_start=1 FT /transl_table=1 FT /gene="p60" FT /product="60kDa protein" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:I7GYF3" FT /protein_id="BAM29347.1" FT /translation="MALSATSSYVAISQHDPKFLDLLRTFWGENDVNELAGKVFSFLKN FT SYTNISGKFSLGDYSCSTWYGGSAEALTAWPDSEGWGRHLLANYIASEKVLAHMHYPLA FT SEIKSAVATPDSVFKDKLSRVGKTVTDISEFPYKVTRQDAKVCAASFGKPGVYTEDLIF FT CIGNYLGRLPVKEEVFGEKILPIAAVRAGTLVLDVDENTLSNERRLAVLNLRGKNKMGD FT PVEGVYFKTKALDIRAVATFVFNSECIDLVVGLPAVQYTILNCLRAYPVVAETFEDRVD FT GLVHVQARVRKELEGLLPFKKEVDLDVVLREATLLPGEIFRGDAATIYPRFKRNVTGGV FT LLRVGSRFSVEEYSCLTRRLVAALLNRNLSLSVGYTEAILMILQRYIHYRTNALRFVNL FT PNMLQFYKGSDLLTVNFEGVDEVFSTYQHTIPEIERAWCAPLADVAYMFLKDTGGSFAK FT WKDLPDIPSHMNFDFVGYVDPKLLSRPELSSLTSLTERFRSRKTPVRGFQLGGRASNPI FT NYMVENLKLSEPESSSVKRLASSKFKGRI" FT CDS 3253..4038 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:I7HBN4" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:I7HBN4" FT /protein_id="BAM29348.1" FT /translation="MSDQVGVPPPQETEAQKNDRLKREKQALDEINSLPVATGRVTVDT FT FESLISGPNAVLNLSKLEIPRLFNVTIPGVVSGAHKVKGARALWELGKSKGITESDKHQ FT IQFLMQSFQSFITHSTSPKVSSASNRSITGKYDGKDVTVSHDEIKTTLDNSIASFGYEN FT TMRQFGRAFTAAIVQGISSGKLEVNTKICASHGIPPNYYPYSPDCLHVDARLFGYDASL FT AAELGKMVAVNKSSGASDTTHNLYEGTKVAPDIFMGGRR" FT CDS 4072..4695 FT /codon_start=1 FT /transl_table=1 FT /gene="p23" FT /product="23kDa protein" FT /db_xref="UniProtKB/TrEMBL:I7GSR7" FT /protein_id="BAM29349.1" FT /translation="MECVLALSRNALDISGEGRDVFELKSVGLYATLLPTERLSFFYDK FT LNVHMNSSRRHYPELFKFLDNLGNVVVTNNGAFFKFLDSQAVVDHFVRKDPSLAAYQSK FT PDVSGGSYCMIAVPALSSFIGSAQHNLRYLVKVLAVGFTRTDDSEALWDFKDSFVVFEY FT EGELRVHYGDSIDTHNSALLDVFDSFKNASGKSDFEKVVCFLSI" XX SQ Sequence 4824 BP; 1268 A; 940 C; 1196 G; 1420 T; 0 other; tctgtgtttc tcacctggta gaggaattga tggttgtgtt cctgaaagtg ataccatttt 60 tataccaaca gtggtcggtc taagggcaga tggaacatac accataggtt tgggcgccct 120 tcaagaaagc gggttgacag tctacagaga catcaaacgc tacttcggta tgaatcggta 180 caatgagagg gagtacaggg aaaagttgaa accaactttc gaagtcgtcg tagacgagtg 240 gtctgtggct atagggccgg tcagtggaga aaagggtaaa gcaaggagtg ttattgcctt 300 agcttgcctt tttgtctctg ccttagccaa gatagctgtg agagtcacta attcgcccat 360 ttcaatttca gtgtgttctg tacccgctga atacagttca tacatgcgaa gcttcatctt 420 tgagagttgt tcgttggcga agatttccgt tcaggctgta gtgaatgaac ccacagcggc 480 tggtctaagc gcctttgtca acattgacaa gagagatctg aaatatatgg ttgtttatga 540 cttcgggggg ggaaccttcg atgcatcatt gatggtagtc ggttctgcct tcgtctgtgt 600 gatagattct cttggagaca attacctggg tggtagagac gttgataacg ctttagccgc 660 ggcagtttgt gatcaactga agctcacgtc cgaagctgtg gatcccttcg ccatggaggc 720 tcttaaaata gatcttgtta gggagccgag taaagccgtt agagacattc tgactaagaa 780 tggtgagatc aaacagattt cgttttctgg tgaagatttc aagaacctgt gcaaaccttt 840 cgtctctaga gcagccgctt tggttgagaa attgttgagg cgtagaaatg ttgattcttg 900 cgtcgctgtt ttaattggcg gttcagcagt gttacccggc gtaagaaatt ccattgcctc 960 tctgagaggt gtctctcaag tcttgtttga cattagtacg tacagagctg ctgtggctat 1020 tggtgcggca atatatgcgc agactttttc aggggcttcg aggtatagat tgatagattg 1080 tgtgtctaat tctctatcag acgaacgctt acctcttaag gctgtcgccg tgttcccaaa 1140 aggtcatccc ataccctcca ctgttactgt ggattttaag atgccttctt acgacactgg 1200 tttagtgtta catgaaggag aatctgcttt catcaacaga aatgccagaa ctttttcagc 1260 gtccctctct actaaagttt ttcctcctaa gcagacgtat aagcaagtgt tctccatttc 1320 cgaagatgga agattaagtg caacgatgaa tgggattgaa ttgagaaaca ctgtcgtgca 1380 gaagtcgcct cctgcaaatc agtattccga agtttttgtc agttctgatg acaaaagaat 1440 cggaccagag gtcgctgata taaaatcgtt ttacgctaag ttgttgaagt cccaagcttt 1500 aatctcttct tcgttaaacg aaagaaagag agtgtattta gaacatggca ttgtctgcga 1560 ctagttctta tgtcgcaata tctcaacatg atcctaagtt tttagacttg ttgagaactt 1620 tctgggggga aaatgatgtt aatgaattgg ccggaaaagt gtttagtttt ctgaaaaatt 1680 catatacgaa catctctgga aaattttctc tgggggatta ttcttgcagc acttggtatg 1740 gtgggtctgc ggaggctttg acagcttggc ccgattctga aggttggggt aggcatttac 1800 tcgcgaacta tattgcatct gagaaagttc ttgctcatat gcattatcca ctcgcaagtg 1860 aaattaaatc tgcggtggcc actcctgata gcgtcttcaa agataagttg tccagagtcg 1920 gaaaaactgt cactgatata agcgaatttc cgtacaaagt gacgagacag gatgcgaaag 1980 tctgtgctgc gagtttcggt aaaccgggtg tctacacaga agatctgata ttttgcatag 2040 gtaattacct gggtcgtttg ccagtgaagg aggaagtttt cggtgagaaa attttaccta 2100 tcgctgccgt acgtgctgga acattagtgt tggacgttga tgaaaacact ctttccaatg 2160 aacgcagact ggccgtccta aacttgaggg gaaagaataa gatgggcgat ccagtggaag 2220 gtgtgtattt taaaacgaaa gcacttgaca tcagagctgt ggcgacgttc gtcttcaact 2280 ctgaatgcat tgacctagtt gttgggcttc ccgccgtcca atacaccatc ctaaattgtt 2340 tgagagctta tcctgtagtg gctgaaactt ttgaagatag ggtggatggt cttgtgcacg 2400 tacaagctag agtgcggaag gagttggagg gtttactgcc ttttaagaaa gaagttgatc 2460 tagatgtcgt cttaagagaa gctacactcc ttccgggaga gatatttagg ggcgatgccg 2520 ctactattta tcctaggttc aagagaaacg tcactggtgg ggtgcttcta cgcgttggtt 2580 cgaggttttc cgttgaagaa tactcgtgtc taactagaag attagtcgca gcactgttaa 2640 accggaatct ttctctgtct gtaggttaca ctgaagccat tctgatgata ctccaaagat 2700 atattcacta tcggacgaat gcgctgaggt ttgttaactt accaaatatg ttgcagtttt 2760 ataaaggttc tgatctctta acagtaaatt tcgaaggtgt cgatgaggtt ttttcaacgt 2820 accaacacac tattccagag attgagagag cctggtgtgc acccttggca gatgtagcgt 2880 acatgttttt gaaagacact ggtggttcgt ttgctaagtg gaaggatctg ccggacattc 2940 cgagccatat gaacttcgac ttcgtgggat acgtggatcc caagctgttg tcgcgtcctg 3000 agttgagtag tttaacttca ctcacggaaa ggttcagatc taggaagact ccagttcgtg 3060 gtttccaact aggaggaagg gcgtcgaatc ctataaatta tatggtggaa aacttaaagt 3120 tgtccgaacc agagagtagt tctgttaagc gactggcttc cagtaaattt aaaggtcgaa 3180 tataaactca gcgagtcttc tggtgtattt aatttgtttt gtcttatttt aaagttattt 3240 ttaatttcga agatgagcga tcaagttggg gtaccaccgc ctcaagaaac cgaggctcaa 3300 aagaacgata gactgaaaag agagaaacag gcgttagatg agatcaattc tcttcctgta 3360 gccaccggtc gtgtgaccgt cgacacattt gaatctctga tctcaggtcc gaatgctgtg 3420 ctgaatctct cgaagctcga gatcccgagg ttattcaatg tgactatacc cggtgtggtt 3480 tcgggtgcgc ataaagtgaa gggagccaga gctctgtggg agttgggaaa atcgaaagga 3540 ataaccgaga gcgataagca tcagatacaa ttcctgatgc aatcttttca aagcttcata 3600 acccactcga cgtcacctaa ggtatcaagt gcttccaata ggtcgataac tggcaaatat 3660 gacggtaaag acgttactgt gtcccacgac gaaattaaga ccacgctgga caactccatc 3720 gcgtctttcg gttacgaaaa tacgatgaga cagtttggta gggctttcac ggccgccatt 3780 gtccagggga tctcgtcggg aaaattggag gtgaatacta aaatatgtgc ttcacatggc 3840 ataccaccga actattaccc ctactctcca gattgtctac atgttgatgc gagactattt 3900 ggatatgacg cttcgttagc ggctgaactg gggaagatgg ttgctgttaa caaatcttcc 3960 ggcgccagcg ataccaccca taatctttac gaagggacga aagtcgcccc agacattttc 4020 atgggtggta gaaggtagag tccgggactc acgtaatttt cgttagaaaa tatggaatgc 4080 gttttggcct tatctagaaa tgctttggac atttcaggtg aaggtcgaga cgtttttgaa 4140 ttaaaaagtg ttggtcttta cgcaactctt cttcctactg agcgtctgtc gttcttctat 4200 gataagttga acgttcacat gaattcatct aggaggcact accctgaatt gttcaagttt 4260 ttggataatt taggaaatgt agtggttact aataatggag cttttttcaa gttcctagat 4320 tctcaagccg ttgtggatca cttcgttaga aaggatccat cgcttgcggc ttatcaaagt 4380 aaacccgacg tctccggagg cagttattgt atgatagctg taccggcctt aagcagtttc 4440 ataggaagtg cgcaacacaa cctacgatat ctggtgaagg tgctggctgt aggtttcacc 4500 cgtacggatg attctgaagc tttgtgggat tttaaagact cttttgtagt ctttgaatac 4560 gaaggggaac ttcgagtgca ttatggggat agcattgata cccataattc tgcacttctc 4620 gatgtttttg attctttcaa gaacgcgtcg ggaaaatcag attttgagaa ggtcgtttgc 4680 tttctctcca tctgaatcaa tgccaggtct gcgtgatcct gtcaggcctg taccacttcc 4740 tcactgagga tataaacccg ttagggcgaa tggtagaatc ataataggga acttatgttc 4800 cctatcttgg agtaatccag gacc 4824 //