ID AB720874; SV 1; linear; genomic RNA; STD; VRL; 4823 BP. XX AC AB720874; XX DT 13-JUL-2012 (Rel. 113, Created) DT 18-SEP-2013 (Rel. 118, Last updated, Version 3) XX DE Grapevine leafroll-associated virus 4 p23, CP, p60, HSP70 genes for 23kDa DE protein, coat protein, 60kDa protein, heat shock protein 70, partial and DE complete cds, strain: Ru1. XX KW . XX OS Grapevine leafroll-associated virus 4 OC Viruses; Riboviria; Closteroviridae; Ampelovirus. XX RN [1] RP 1-4823 RA Ito T., Nakaune R., Nakano M., Suzaki K.; RT ; RL Submitted (15-MAY-2012) to the INSDC. RL Contact:Takao Ito National Institute of Fruit Tree Science, Grape and RL Persimmon Research Station; Akitsu, Higashihiroshima, Hiroshima 739-2494, RL Japan XX RN [2] RC DOI:10.1007/s00705-012-1444-2 RX DOI; 10.1007/s00705-012-1444-2. RX PUBMED; 22926688. RA Ito T., Nakaune R., Nakano M., Suzaki K.; RT "Novel variants of grapevine leafroll-associated virus 4 and 7 detected RT from a grapevine showing leafroll symptoms"; RL Arch. Virol. 158(1):273-275(2013). XX DR MD5; 705ec0b7e24cf682fdd4715ae97f085f. XX FH Key Location/Qualifiers FH FT source 1..4823 FT /organism="Grapevine leafroll-associated virus 4" FT /host="Vitis vinifera cv. Chiliaki Chjornyj" FT /strain="Ru1" FT /mol_type="genomic RNA" FT /country="Japan:Hiroshima, Akitsu" FT /db_xref="taxon:70177" FT CDS <1..1564 FT /codon_start=2 FT /transl_table=1 FT /gene="HSP70" FT /product="heat shock protein 70" FT /db_xref="GOA:I7GYF2" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:I7GYF2" FT /protein_id="BAM29342.1" FT /translation="LCFSPGRGIDGCVPESDTIFIPTVVGLRADGTYTIGLGALQESGL FT TVYRDIKRYFGMNRYNEREYREKLKPTFEVVVDEWSVAIGPVSGEKGKARSVIALACLF FT VSALAKIAVRVTNSPISISVCSVPAEYSSYMRSFIFESCSLAKISVQAVVNEPTAAGLS FT AFVNIDKRDLKYMVVYDFGGGTFDASLMVVGSAFVCVIDSLGDNYLGGRDVDNALAAAV FT CDQLKLTSEAVDPFAMEALKIDLVREPSKAVRDILTKNGEIKQISFSGEDFKNLCKPFV FT SRAAALVEKLLRRRNVDSCVAVLIGGSAVLPGVRNSIASLRGVSQVLFDISTYRAAVAI FT GAAIYAQTFSGASRYRLIDCVSNSLSDERLPLKAVAVFPKGHPIPSTVTVDFKMPSYDT FT GLVLHEGESAFINRNARTFSASLSTKVFPPKQTYKQVFSISEDGRLSATMNGIELRNTV FT VQKSPPANQYSEVFVSSDDKRIGPEVADIKSFYAKLLKSQALISSSLNERKRVYLEHGI FT VCD" FT CDS 1545..3185 FT /codon_start=1 FT /transl_table=1 FT /gene="p60" FT /product="60kDa protein" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:I7HBN2" FT /protein_id="BAM29343.1" FT /translation="MALSATSSYVAISQHDPKFLDLLRTFWGENDVNELAGKVFSFLKN FT SYTNISGKFSLGDYSCSTWYGGSAEALTAWPDSEGWGRHLLANYIASEKVLAHMHYPLA FT SEIKSAVATPDSVFKDKLSRVGKTVTDISEFPYKVTRQDAKVCAASFGKPGVYTEDLIF FT CIGNYLGRLPVKEEVFGEKILPIAAVRAGTLVLDVDENTLSNERRLAVLNLRGKNKMGD FT PVEGVYFKTKALDIRAVATFVFNSECIDLVVGLPAVQYTILNCLRAYPVVAETFEDRVD FT GLVHVQARVRKELEGLLPFKKEVDLDVVLREATLLPGEIFRGDAATIYPRFKRNVTGGV FT LLRVGSRFSVEEYSCLTRRLVAALLNRNLSLSVGYTEAILMILQRYIHYRTNALRFVNL FT PNMLQFYKGSDLLTVNFEGVDEVFSTYQHTIPEIERAWCAPLADVAYMFLKDTGGSFAK FT WKDLPDIPSHMNFDFVGYVDPKLLSNPELSSLTSLMERFRSKKTPVRGFQLGGRASNPI FT DHMVDNLNLSELESSSVKKLVSNKFKGRI" FT CDS 3252..4037 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:I7GSR6" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:I7GSR6" FT /protein_id="BAM29344.1" FT /translation="MSSQVNASPSQETEVQKNERLRKENQALDEINSLPVATGRVTVDT FT FESLISGPNAVLNLSKLDIPRLFNVTIPGVVSGAHKVKGARALWELGKSKGISESDKHQ FT IQFLMQSFQSFITHSTSPKVSSASNRSITGKYDGKDVTVSHDEIKTTLDNSIASFGYEN FT TMRQFGRAFTAAIVQGISSGKLEVNTKVCASHGIPPNYYPYSPDCLHVDARLFGYDASL FT AAELGKMVAVNKASGTSDTIHNLYEGTKVAPDVFMGGRR" FT CDS 4071..4694 FT /codon_start=1 FT /transl_table=1 FT /gene="p23" FT /product="23kDa protein" FT /db_xref="UniProtKB/TrEMBL:I7HDT4" FT /protein_id="BAM29345.1" FT /translation="MECVLALSRNVSEVSGEDRDVFELKNIGLYAALLPTERLSFFYDK FT LNVHINSSRKHYPDLFKFLDNLGNVVVTNNGAFFKFLDSQAVVDHFVRKDPSLAAYQSK FT PTTSGGSYCMIAVPALHGFIGSVHHSLRCLVKVLAVGFTRVDDSEAMWDFKDSFVVFEY FT EGELQVYYGDSIDTRNSALLEVFDSFKSASGKSDFEKVVGFLSI" XX SQ Sequence 4823 BP; 1286 A; 929 C; 1175 G; 1433 T; 0 other; tctgtgtttc tcacctggta gaggaattga tggttgtgtt cctgaaagtg ataccatttt 60 tataccaaca gtggtcggtc taagggcaga tggaacatac accataggtt tgggcgccct 120 tcaagaaagc gggttgacag tctacagaga catcaaacgc tacttcggta tgaatcggta 180 caatgagagg gagtacaggg aaaagttgaa accaactttc gaagtcgtcg tagacgagtg 240 gtctgtggct atagggccgg tcagtggaga aaagggtaaa gcaaggagtg ttattgcctt 300 agcttgcctt tttgtctctg ccttagccaa gatagctgtg agagtcacta attcgcccat 360 ttcaatttca gtgtgttctg tacccgctga atacagttca tacatgcgaa gcttcatctt 420 tgagagttgt tcgttggcga agatttccgt tcaggctgta gtgaatgaac ccacagcggc 480 tggtctaagc gcctttgtca acattgacaa gagagatctg aaatatatgg ttgtttatga 540 cttcgggggg ggaaccttcg atgcatcatt gatggtagtc ggttctgcct tcgtctgtgt 600 gatagattct cttggagaca attacctggg tggtagagac gttgataacg ctttagccgc 660 ggcagtttgt gatcaactga agctcacgtc cgaagctgtg gatcccttcg ccatggaggc 720 tcttaaaata gatcttgtta gggagccgag taaagccgtt agagacattc tgactaagaa 780 tggtgagatc aaacagattt cgttttctgg tgaagatttc aagaacctgt gcaaaccttt 840 cgtctctaga gcagccgctt tggttgagaa attgttgagg cgtagaaatg ttgattcttg 900 cgtcgctgtt ttaattggcg gttcagcagt gttacccggc gtaagaaatt ccattgcctc 960 tctgagaggt gtctctcaag tcttgtttga cattagtacg tacagagctg ctgtggctat 1020 tggtgcggca atatatgcgc agactttttc aggggcttcg aggtatagat tgatagattg 1080 tgtgtctaat tctctatcag acgaacgctt acctcttaag gctgtcgccg tgttcccaaa 1140 aggtcatccc ataccctcca ctgttactgt ggattttaag atgccttctt acgacactgg 1200 tttagtgtta catgaaggag aatctgcttt catcaacaga aatgccagaa ctttttcagc 1260 gtccctctct actaaagttt ttcctcctaa gcagacgtat aagcaagtgt tctccatttc 1320 cgaagatgga agattaagtg caacgatgaa tgggattgaa ttgagaaaca ctgtcgtgca 1380 gaagtcgcct cctgcaaatc agtattccga agtttttgtc agttctgatg acaaaagaat 1440 cggaccagag gtcgctgata taaaatcgtt ttacgctaag ttgttgaagt cccaagcttt 1500 aatctcttct tcgttaaacg aaagaaagag agtgtattta gaacatggca ttgtctgcga 1560 ctagttctta tgtcgcaata tctcaacatg atcctaagtt tttagacttg ttgagaactt 1620 tctgggggga aaatgatgtt aatgaattgg ccggaaaagt gtttagtttt ctgaaaaatt 1680 catatacgaa catctctgga aaattttctc tgggggatta ttcttgcagc acttggtatg 1740 gtgggtctgc ggaggctttg acagcttggc ccgattctga aggttggggt aggcatttac 1800 tcgcgaacta tattgcatct gagaaagttc ttgctcatat gcattatcca ctcgcaagtg 1860 aaattaaatc tgcggtggcc actcctgata gcgtcttcaa agataagttg tccagagtcg 1920 gaaaaactgt cactgatata agcgaatttc cgtacaaagt gacgagacag gatgcgaaag 1980 tctgtgctgc gagtttcggt aaaccgggtg tctacacaga agatctgata ttttgcatag 2040 gtaattacct gggtcgtttg ccagtgaagg aggaagtttt cggtgagaaa attttaccta 2100 tcgctgccgt acgtgctgga acattagtgt tggacgttga tgaaaacact ctttccaatg 2160 aacgcagact ggccgtccta aacttgaggg gaaagaataa gatgggcgat ccagtggaag 2220 gtgtgtattt taaaacgaaa gcacttgaca tcagagctgt ggcgacgttc gtcttcaact 2280 ctgaatgcat tgacctagtt gttgggcttc ccgccgtcca atacaccatc ctaaattgtt 2340 tgagagctta tcctgtagtg gctgaaactt ttgaagatag ggtggatggt cttgtgcacg 2400 tacaagctag agtgcggaag gagttggagg gtttactgcc ttttaagaaa gaagttgatc 2460 tagatgtcgt cttaagagaa gctacactcc ttccgggaga gatatttagg ggcgatgccg 2520 ctactattta tcctaggttc aagagaaacg tcactggtgg ggtgcttcta cgcgttggtt 2580 cgaggttttc cgttgaagaa tactcgtgtc taactagaag attagtcgca gcactgttaa 2640 accggaatct ttctctgtct gtaggttaca ctgaagccat tctgatgata ctccaaagat 2700 atattcacta tcggacgaat gcgctgaggt ttgttaactt accaaatatg ttgcagtttt 2760 ataaaggttc tgatctctta acagtaaatt tcgaaggtgt cgatgaggtt ttttcaacgt 2820 accaacacac tattccagag attgagagag cctggtgtgc acccttggca gatgtcgcgt 2880 acatgttttt aaaggatact ggaggttcat ttgctaagtg gaaagattta ccagatattc 2940 cgagccacat gaacttcgac tttgtaggat acgtggatcc caagctgctg tcgaaccctg 3000 agttgagtag tttgacttcg ctcatggaaa ggtttagatc taagaaaacc ccagttcgcg 3060 gcttccagtt ggggggacgg gcgtctaatc ctatagatca tatggtggac aacctaaatt 3120 tatctgaatt ggaaagtagt tctgttaaga aactagtttc caataaattt aaaggtcgaa 3180 tatagactcg gtgagtcgtc tggtacattt gatttgtctt gttacaaatt tgaagtattt 3240 ttatttcaaa gatgagcagc caagtcaacg catcaccatc tcaagagacc gaagttcaaa 3300 agaatgaaag gcttagaaaa gaaaaccaag cactggatga gatcaactct cttcctgtgg 3360 ctaccggtcg tgtgaccgtt gacacatttg aatctctgat ctcaggtcca aatgctgttc 3420 tgaatctctc aaagctcgac attccgagat tatttaatgt gactataccc ggtgtggttt 3480 cgggtgcgca caaagtgaaa ggagctagag ccttatggga attgggaaag tcgaaaggga 3540 tatccgagag tgataaacat cagatacagt ttctgatgca atcttttcag agtttcataa 3600 cacactcgac atcacctaaa gtatcaagcg cttccaatag gtcgataact ggtaaatatg 3660 acggtaaaga tgttactgta tcccatgacg aaataaaaac cacgctggac aactctatcg 3720 catctttcgg ttacgaaaat acgatgagac aatttggtag ggctttcaca gccgctattg 3780 tccaaggcat ctcgtcaggg aagttggaag tgaatactaa agtgtgcgct tcacatggta 3840 taccacctaa ctattacccc tactctccag attgtctaca tgttgatgca agactgtttg 3900 gatatgatgc ttcgttagcg gctgaactgg ggaagatggt tgctgttaac aaggcttccg 3960 gcactagtga tactattcat aacttgtacg aagggacgaa agtcgccccg gatgttttta 4020 tgggtggtag acggtagagt ctgagactca cttaattttc gttagaaaat atggaatgcg 4080 ttttggcttt atctagaaat gtttcggagg tttcaggtga agatcgagat gttttcgagt 4140 tgaaaaatat cggtctttac gctgctcttc tccctactga gcggttgtcg ttcttctatg 4200 ataagctgaa cgtccacata aactcatcta ggaaacacta ccctgatttg ttcaagtttt 4260 tggacaactt aggaaatgta gtggttacta ataatggagc tttcttcaag ttcctagact 4320 ctcaagccgt ggtggatcac ttcgttagaa aggatccgtc tcttgcggct tatcagagca 4380 aacccactac ctccggaggc agttattgta tgatagctgt gccggcctta cacggattca 4440 taggaagtgt acaccacagc ctacgatgtc tagtgaaggt attagctgta ggtttcaccc 4500 gtgtggatga ttctgaagct atgtgggatt ttaaagactc gtttgtagtc tttgaatatg 4560 aaggggaatt acaagtgtat tacggggata gcattgatac ccgtaattct gcacttctcg 4620 aggtttttga ctcttttaag agtgcctcgg gtaaatcaga ttttgagaaa gtcgttggct 4680 tcctctctat ctaaatcaat gccaggtccg tgcgatcctg tctggcctgt accacttcct 4740 cactgaggat ataaacccgt tagggtgaat ggtaaaatca aaatagggaa cttatgttcc 4800 ctatcttgga gtaatccagg acc 4823 //