ID   AB719458; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   AB719458;
XX
DT   10-MAY-2012 (Rel. 112, Created)
DT   10-MAY-2012 (Rel. 112, Last updated, Version 1)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: TWD.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-879
RA   Yamamoto H., Senda M.;
RT   ;
RL   Submitted (08-MAY-2012) to the INSDC.
RL   Contact:Hideki Yamamoto Akita Agricultural Experiment Station, Plant
RL   Protection Group; Yuwa-aikawa, Akita, Akita 010-1231, Japan
XX
RN   [2]
RA   Yamamoto H., Senda M.;
RT   "Nucleotide sequences of potyviral coat protein genes";
RL   Unpublished.
XX
DR   MD5; e1903d243b14e53bf253782757b7a451.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..879
FT                   /organism="Turnip mosaic virus"
FT                   /host="Raphanus sativus"
FT                   /isolate="TWD"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Kazuno, Towada-oyu"
FT                   /collection_date="Nov-2011"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="NIb-CP precursor"
FT                   /db_xref="GOA:I2FJU6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:I2FJU6"
FT                   /protein_id="BAM15281.1"
FT                   /translation="VYHQAGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKG
FT                   KNVAQEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTD
FT                   LSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGD
FT                   DQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNR
FT                   NMHNLLGVKGL"
FT   mat_peptide     <1..12
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     13..876
FT                   /gene="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 291 A; 186 C; 236 G; 166 T; 0 other;
     gtttatcacc aggcaggtga gacgcttgat gcaggcttga cagacgagca aaagcaggcg        60
     gagaaggaga agaaggagag agagaaggca gaaaaggaac gagagaggca gaagcagttg       120
     gcactcaaga aaggcaagaa tgttgcacaa gaagagggag aacgcgacaa ggaagtaaac       180
     gctggaacct ctggaacatt cagtgtaccc agacttaaga gtctgacaag caagatgcgc       240
     gtgccaagat acgagcaaag agtggctcta aacctcgatc atctaatcct atacacgccg       300
     gagcagacgg atctatccaa cacacgttca acgcgaaagc agtttgacac atggtttgaa       360
     ggagtaatgg ctgattacga actcacggag gacaaaatgc aaatcattct caatggttta       420
     atggtctggt gcattgagaa cggaacctcc ccgaacataa acggaatgtg ggtgatgatg       480
     gacggcgatg atcaggtgga attcccgatc aaaccgctca ttgaccacgc caaacccaca       540
     tttaggcaga taatggccca tttcagtgac gtagctgaag cgtacattga aaagcgtaac       600
     caagaccgac catacatgcc acgatatggt cttcagcgca atttaaccga catgagctta       660
     gctcgatacg cgtttgactt ctatgaaatg acttctagaa ctccaatacg tgcgagagaa       720
     gcacacatcc agatgaaagc agcagcactg cgtggcgcaa ataacaattt gttcggcttg       780
     gatggaaacg ttggtacaac ggtagagaac acggagaggc atacgaccga ggacgttaat       840
     cggaacatgc ataacttact tggcgttaag gggttatga                              879
//