ID   AB698490; SV 1; linear; genomic RNA; STD; VRL; 2113 BP.
XX
AC   AB698490;
XX
DT   17-AUG-2012 (Rel. 113, Created)
DT   20-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Rosellinia necatrix victorivirus 1 RdRp gene for RNA-dependent RNA
DE   polymerase, partial cds.
XX
KW   .
XX
OS   Rosellinia necatrix victorivirus 1
OC   Viruses; Riboviria; Totiviridae; Victorivirus.
XX
RN   [1]
RP   1-2113
RA   Yaegashi H., Kanematsu S.;
RT   ;
RL   Submitted (13-FEB-2012) to the INSDC.
RL   Contact:Hajime Yaegashi NARO, National Institute of Fruit Tree Science,
RL   Apple Research Station; Shimokuriyagawa, Nabeyasiki 92-24, Morioka, Iwate
RL   0200123, Japan
XX
RN   [2]
RC   DOI:10.1111/j.1574-6941.2012.01454.x
RX   PUBMED; 22808916.
RA   Yaegashi H., Nakamura H., Sawahata T., Sasaki A., Iwanami Y., Ito T.,
RA   Kanematsu S.;
RT   "Appearance of mycovirus-like double-stranded RNAs in the white root rot
RT   fungus, Rosellinia necatrix, in an apple orchard";
RL   FEMS Microbiol. Ecol. 83(1):49-62(2013).
XX
DR   MD5; ec19c64e4f80b69bb7f5791e20b1efee.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2113
FT                   /organism="Rosellinia necatrix victorivirus 1"
FT                   /host="Rosellinia necatrix W1028"
FT                   /strain="1-W1028/S1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Nagano, Suzaka, Nagano Fruit Tree
FT                   Experiment Station"
FT                   /collection_date="Jun-2009"
FT                   /db_xref="taxon:1148491"
FT   CDS             <1..2084
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:J7MDC8"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:J7MDC8"
FT                   /protein_id="BAM36400.1"
FT                   /translation="LLHLRGLLQGLRTTQGTGAAALMVARAAGRLTEDQVISLILYRTA
FT                   LAPLFGQRSYDYAWWAITEPGNTAGLSNALKALGLNATACGAALVEAKALQGRGIAPVD
FT                   MAGEVAFRVQPDLVKAKVLEPDYDELREHIKHVLHSELAGELELTPLAEFWSSRWLWCV
FT                   NGSNTSTSDRAMGLDPHEYADTHTRTYRRMVAETLEQEPISTWDGTTSVSASVKLETAK
FT                   SRAIFACDTRSYFAFSWILNDVQKRWGNNRVLLDPGKGGMAGIDRRIRRSQHTGGVNVM
FT                   LDYDDFNSHHSTRSMQILFEELCDMYSAPSWYRDTLVNSFERMFINFEGKQHHVLGTLM
FT                   SGHRGTTFINSVLNAVYIRAAIGGPTFDSLVSLHTGDDVYLRAPTLSDCSRILTAAKDY
FT                   GCRMNPTKQSIGFRRAEFLRMGIGERASYGYLARSVAALACGNWFNPNPMTPWEGFNSL
FT                   VTSARSIINRAGGQLRLGELLSPAVRHGKSISYRTRAQLIDGECAIEGAPVYGSDFRLK
FT                   TFEVKLPKADAVPISPRWRTNATRDYLLDHVSPIEAEALSLAGADITTMMVVASFGKGL
FT                   DRKVLQSTPDFVLRRKPVRAALGFTDVVTLLTSIPRVGCLSGYPLLNLVAGRLSNDELR
FT                   HLVLLAGGDANAADLQVEAFGAESLTRNIIGTLPFSDAVNLGKRTNSANVYVLTSIYM"
XX
SQ   Sequence 2113 BP; 447 A; 631 C; 579 G; 456 T; 0 other;
     cgctcctgca cctgcgtggc ctcctccaag gcctgcgcac cactcagggc accggcgcag        60
     ccgccttgat ggtggcacgt gcagctggga gattgaccga ggaccaggtc atctccctca       120
     tcttatatcg gacggcgttg gcgcccctct tcggccaacg ctcgtatgac tatgcctggt       180
     gggcgatcac cgagccaggc aacacggcgg gcctgagtaa cgcactcaag gccctgggtt       240
     tgaacgcgac cgcgtgtggc gcagctttgg ttgaggcaaa agcgctgcag ggacgtggca       300
     ttgcccctgt cgacatggcg ggggaagtgg cttttcgcgt tcagcccgac cttgtcaagg       360
     cgaaggtcct cgagcccgac tacgacgagt tgcgtgagca cattaaacac gtgcttcaca       420
     gtgagctcgc cggcgagctg gagttgacgc ccctcgctga attttggtcc tcccggtggt       480
     tgtggtgcgt caacggttca aacacgagca cctccgaccg ggccatgggc ctcgaccctc       540
     acgagtacgc agacacacac acgcgtactt accgtcgcat ggttgcggag acgctcgaac       600
     aggagccgat cagcacttgg gatggtacga cgtccgtctc ggcgtcagtg aaactcgaga       660
     cagccaagag tcgcgcaatc ttcgcatgcg acacccgctc ttatttcgct ttttcttgga       720
     ttctaaatga cgtccaaaag cgctggggca acaaccgagt gttgctcgat ccgggcaaag       780
     gcggcatggc aggcatagac cgccgcataa gacgctccca acacactggg ggtgtcaatg       840
     tcatgttgga ctacgatgac ttcaacagtc accactcgac gcggtctatg caaattcttt       900
     tcgaggagct gtgcgacatg tactcggcgc cgagctggta cagggacaca ctggttaatt       960
     cattcgagcg catgtttatt aattttgagg ggaagcaaca ccacgtcctg gggaccctca      1020
     tgtctggcca ccggggcacc actttcatta attccgtttt aaacgcggtc tacattaggg      1080
     cggccatcgg cggccccact ttcgactcgc tagttagttt gcacaccggc gacgatgttt      1140
     acctccgcgc ccccacactc tctgattgtt ctaggatcct tactgcggcc aaggactacg      1200
     gctgtcggat gaacccaacc aagcaaagta taggtttcag acgtgcagag ttcctacgca      1260
     tggggatcgg tgaacgggcc tcttacggct acctcgctcg ctctgtggcc gccttagcat      1320
     gcggcaactg gttcaacccc aacccgatga caccgtggga gggttttaat tcactcgtta      1380
     cttctgcccg cagcataatt aaccgcgcgg gcggacaact ccggttaggc gaattgctta      1440
     gtccggctgt acgccacggg aaatcaatat catacaggac ccgtgctcaa ctaattgacg      1500
     gtgagtgtgc cattgaaggc gcaccggtct acggttccga cttccgactc aagacttttg      1560
     aggtcaagtt accgaaggct gacgccgttc cgatctcccc acggtggcgc acgaacgcca      1620
     ctcgtgatta cctcttggac cacgtgagtc cgattgaggc agaagcactg tcgctcgccg      1680
     gggcggatat aactactatg atggtcgtcg caagttttgg aaaaggacta gaccggaaag      1740
     ttttacaatc cacccccgac tttgtgctcc gccgaaaacc ggtccgcgca gctttagggt      1800
     tcaccgatgt ggttacgctc ctgacgtcga ttccccgcgt cgggtgccta tcgggatatc      1860
     ctctgctcaa cctggttgcc ggtcgtctta gcaacgacga actccggcac ctggtccttc      1920
     tagccggcgg cgatgccaac gccgccgacc tacaagttga ggctttcgga gcggaaagcc      1980
     taacgaggaa cataattggc actcttcctt tctcagacgc cgttaacctg ggaaagcgta      2040
     caaactccgc gaacgtctac gtactcacat ccatttacat gtagacacaa taatcgcgca      2100
     ggtcaacaac gac                                                         2113
//