ID   AB697853; SV 1; linear; viral cRNA; STD; VRL; 1490 BP.
XX
AC   AB697853;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Fig mosaic virus NP gene for nucleocapsid protein, complete cds, isolate:
DE   SB2-3.
XX
KW   .
XX
OS   Fig mosaic emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1490
RA   Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.;
RT   ;
RL   Submitted (09-FEB-2012) to the INSDC.
RL   Contact:Shigetou Namba The University of Tokyo, Graduate School of
RL   Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657,
RL   Japan
XX
RN   [2]
RC   DOI:10.1099/vir.0.042663-0
RX   DOI; 10.1099/vir.0.042663-0.
RX   PUBMED; 22513386.
RA   Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D.,
RA   Yamaji Y., Namba S.;
RT   "Identification and characterization of two novel genomic RNA segments of
RT   fig mosaic virus, RNA5 and RNA6";
RL   J. Gen. Virol. 93(Pt 7):1612-1619(2012).
XX
DR   MD5; 20d0b02442ade3f7a13c2acce94aaa4c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1490
FT                   /organism="Fig mosaic emaravirus"
FT                   /segment="3"
FT                   /host="Ficus carica"
FT                   /isolate="SB2-3"
FT                   /mol_type="viral cRNA"
FT                   /country="Serbia"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: 3TerE, fwd_seq: ggagttcactact,
FT                   rev_name: 5TerE, rev_seq: agtagtgttctcc"
FT                   /db_xref="taxon:1980427"
FT   CDS             100..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:I2FFM7"
FT                   /db_xref="UniProtKB/TrEMBL:I2FFM7"
FT                   /protein_id="BAM13812.1"
FT                   /translation="MAPKSKTTSASSSKITLGHMQENTILLGSGSKLKAIKLTNVVNGK
FT                   LTHPETSDLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEKLQA
FT                   RNLRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGILKHTFDEEFDWKLSKYVK
FT                   TNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYELYPAEVLAYTLIRLQYR
FT                   KNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFDEALNLIGKDNVSEAYVELARDIGST
FT                   SKTKRNDEAIFKFKELIASFLPALEADRIASAHV"
XX
SQ   Sequence 1490 BP; 529 A; 221 C; 255 G; 485 T; 0 other;
     agtagtgaac tcccataatt aactcaaaat caagcaaagc taacattaaa tttatattgg        60
     tattttactc caaagtactt tttttcatta gaatatatca tggcacctaa gagtaagact       120
     acatcagcaa gctccagcaa gatcactctt ggtcatatgc aagaaaacac tatcttactg       180
     ggctcaggtt caaagcttaa ggctattaaa ttgactaatg tggttaacgg taagttaact       240
     catcctgaga catctgactt gaaacctata gatgtagaag tgcaagcttt tacctctgca       300
     agtcagaata ttagcaattt cacactccac aagtatcgta acatatgtca tgttgacaca       360
     tgtgctgcac atctttctaa atctaaggag aataaagaga agcttcaagc cagaaatttg       420
     agattgatcg tatcatccaa tgaatttttg gtggttgtta aagagcttaa tgatagtaca       480
     gttgacaatg ttgtttcatt taacaaagcc tgtgctatca tgtcagctgg tatattaaaa       540
     catacctttg atgaggaatt tgactggaaa ttatcaaaat atgtaaagac gaacaacact       600
     accaaagtga ttcctgatgt gaagatcata aatcgactag caggtcagat gggcttgtca       660
     gctggtaatc catactactg gatgattgtg cctggttatg aattcttgta tgaactttat       720
     ccagctgagg tattagcata cactctgata aggctccaat acaggaaaaa cctaaatata       780
     ccagatagta tgactgatgc tgatattgtc agttctcttg ttatgaaaat gaacagaatt       840
     cataaacttg aacagaccag ctttgatgaa gccctaaatc ttataggcaa ggataatgta       900
     tccgaagctt atgtggaact tgcaagagat ataggaagca cgagcaagac aaagagaaat       960
     gatgaagcaa ttttcaagtt taaggagtta attgcatcat tcctacctgc acttgaagca      1020
     gataggattg caagtgctca tgtttgaact tgtcattagt cttttccaat gtttgtatta      1080
     gtggaatgat taattcacta taattaatga tatgttttag tgtatattag tgtaatttaa      1140
     gtgtgttata agcaatatat atctgtgtgt atatttgcta aaaatacaaa attaaaaaaa      1200
     caaaaatata taagatgata taaaatgtat aagtttgtat gtgtgttctt caagtttctt      1260
     aattgtcaac agtgtttaat atacttatta taatctattg catatttatt atgaaaaaaa      1320
     accaaaaaaa ttaaaaaaat cacaaaaaga caaaaaaaag acatatatgt atatatatgt      1380
     cgaaattccg ttttgaaatt ctatctgaca cgtgtttttc tttattgata ccattgttag      1440
     atttgttaag atttctttga cttagtttta aattatggga gaacactact                 1490
//