ID   AB697852; SV 1; linear; viral cRNA; STD; VRL; 1490 BP.
XX
AC   AB697852;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Fig mosaic virus NP gene for nucleocapsid protein, complete cds, isolate:
DE   SB2-2.
XX
KW   .
XX
OS   Fig mosaic emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1490
RA   Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.;
RT   ;
RL   Submitted (09-FEB-2012) to the INSDC.
RL   Contact:Shigetou Namba The University of Tokyo, Graduate School of
RL   Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657,
RL   Japan
XX
RN   [2]
RC   DOI:10.1099/vir.0.042663-0
RX   DOI; 10.1099/vir.0.042663-0.
RX   PUBMED; 22513386.
RA   Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D.,
RA   Yamaji Y., Namba S.;
RT   "Identification and characterization of two novel genomic RNA segments of
RT   fig mosaic virus, RNA5 and RNA6";
RL   J. Gen. Virol. 93(Pt 7):1612-1619(2012).
XX
DR   MD5; 681ac0bf043c160b9437ab990b41ef8a.
DR   EuropePMC; PMC6316199; 30513865.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1490
FT                   /organism="Fig mosaic emaravirus"
FT                   /segment="3"
FT                   /host="Ficus carica"
FT                   /isolate="SB2-2"
FT                   /mol_type="viral cRNA"
FT                   /country="Serbia"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: 3TerE, fwd_seq: ggagttcactact,
FT                   rev_name: 5TerE, rev_seq: agtagtgttctcc"
FT                   /db_xref="taxon:1980427"
FT   CDS             100..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:I2FFM9"
FT                   /db_xref="UniProtKB/TrEMBL:I2FFM9"
FT                   /protein_id="BAM13811.1"
FT                   /translation="MAPKSKTTSASSSKITPGHMQENTILLGSGSKLKAIKLTNVVNGK
FT                   LTHPETSDLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEKLQA
FT                   RNLRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGILKHTFDEEFDWKLSKYVK
FT                   TNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYELYPAEVLAYTLVRLQYR
FT                   KNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFDEALNLIGKDNVSEAYVELARDIGST
FT                   SKTKRNDEAILKFKELIASFLPALEADRIASAHV"
XX
SQ   Sequence 1490 BP; 538 A; 217 C; 248 G; 487 T; 0 other;
     agtagtgaac tcccataatt aactcaaaat caagcaaatc taacattaaa tttatattgg        60
     tattttactc caaagtactt tttttcatta gaatatatca tggcacctaa gagtaagact       120
     acatcagcaa gctccagcaa gatcactcct ggtcatatgc aagaaaacac tatcttactg       180
     ggctcaggtt caaagcttaa ggctattaaa ttgactaatg tggttaacgg taagttaact       240
     catcctgaga catctgactt gaaacctata gatgtagaag tgcaagcttt tacctctgca       300
     agtcagaata ttagcaattt cacactccac aagtatcgta acatatgtca tgtcgacaca       360
     tgtgctgcac atctttctaa gtctaaggag aataaagaga agcttcaagc cagaaatttg       420
     agattgattg tatcatccaa tgaatttttg gtggtcgtta aagagcttaa tgatagtaca       480
     gttgacaatg ttgtttcatt taataaagca tgtgctatca tgtcagctgg tatactaaaa       540
     catacctttg atgaggaatt tgactggaaa ttatcaaaat atgtaaagac gaacaacact       600
     accaaagtaa ttcctgatgt gaagatcata aatcgactag caggtcagat gggcttgtca       660
     gctggtaatc catattactg gatgattgtg cctggttatg aattcttgta tgaactttat       720
     ccagctgagg tattagcata cactctggta agactccaat acaggaaaaa cctaaatata       780
     ccagatagta tgactgatgc tgatattgtc agttctcttg ttatgaaaat gaatagaatt       840
     cataaacttg aacagaccag ctttgatgaa gccctaaatc ttataggcaa ggataatgta       900
     tccgaagctt atgtggaact tgcaagagat ataggaagca cgagcaagac aaagagaaat       960
     gatgaagcaa ttcttaagtt taaggagtta attgcatcat tcctacctgc acttgaagca      1020
     gataggattg caagtgctca tgtttgaact tgttattagt cttttctgat gtttgtatta      1080
     gtagaataat taatttaata taattaataa tatattttaa tgtatattaa tgtaatctaa      1140
     gtatatcatt agcaatatat atctatgtgt gtgtttgcta aaaatacaaa attaaaaaaa      1200
     caaaaatata taagatgata taaaatgtgt aagtttgtat gtgtgttttt caagtttctt      1260
     aaatatcaac aatgttcaat atacttatta taatctattg catgtttatt atgaaaaaaa      1320
     accaaaaaaa gtaaaaaaat cataaaaaaa caaaaagaag acatatatgt atatatatgt      1380
     cgaaattccg ttttgaaatt ctatctgaca cgtatttttc tttattgata ccattgttag      1440
     atttgttaag atttctttga cttagtttta aattatggga gaacactact                 1490
//