ID   AB697850; SV 1; linear; viral cRNA; STD; VRL; 1490 BP.
XX
AC   AB697850;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Fig mosaic virus NP gene for nucleocapsid protein, complete cds, isolate:
DE   JTT-Vi.
XX
KW   .
XX
OS   Fig mosaic emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1490
RA   Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.;
RT   ;
RL   Submitted (09-FEB-2012) to the INSDC.
RL   Contact:Shigetou Namba The University of Tokyo, Graduate School of
RL   Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657,
RL   Japan
XX
RN   [2]
RC   DOI:10.1099/vir.0.042663-0
RX   DOI; 10.1099/vir.0.042663-0.
RX   PUBMED; 22513386.
RA   Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D.,
RA   Yamaji Y., Namba S.;
RT   "Identification and characterization of two novel genomic RNA segments of
RT   fig mosaic virus, RNA5 and RNA6";
RL   J. Gen. Virol. 93(Pt 7):1612-1619(2012).
XX
DR   MD5; 700e7fa45c612697a72e90590dfbeff4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1490
FT                   /organism="Fig mosaic emaravirus"
FT                   /segment="3"
FT                   /host="Ficus carica cv. Violette de Sollies"
FT                   /isolate="JTT-Vi"
FT                   /mol_type="viral cRNA"
FT                   /country="Japan:Tokyo"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: 3TerE, fwd_seq: ggagttcactact,
FT                   rev_name: 5TerE, rev_seq: agtagtgttctcc"
FT                   /db_xref="taxon:1980427"
FT   CDS             100..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:I2FFM4"
FT                   /db_xref="UniProtKB/TrEMBL:I2FFM4"
FT                   /protein_id="BAM13809.1"
FT                   /translation="MAPKSKTTSASSSKITLGHMQENTVLLGSGSKLKAIKLTNVVNGK
FT                   LTHPETSDLKPIDVEVQAFTSASQNVSNFTLHKYRNICHVDTCAAHLSKSKENKEKLQA
FT                   RNLRLVVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGILKHTFDEEFDWKLSKYVK
FT                   TNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYELYPAEVLAYTLIRLQYR
FT                   KNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFDEALNLIGKDNVSEAYVELARDIGST
FT                   SKTKRNDEAILKFKELIASFLPALEADRIASAHV"
XX
SQ   Sequence 1490 BP; 532 A; 220 C; 254 G; 484 T; 0 other;
     agtagtgaac tcccataatt aactcaaaat caagcaaatc taacattaaa tttatattgg        60
     tattttactc caaagtactt gtttccatta gaatatatca tggcacctaa gagtaagact       120
     acatcagcaa gctccagcaa gatcactctt ggtcatatgc aagaaaacac tgtcttactg       180
     ggctcaggtt cgaagcttaa ggctattaaa ctgactaatg tagttaacgg taagttaact       240
     catcctgaga catctgactt gaaacctata gatgtagaag tgcaagcttt tacctctgca       300
     agtcagaatg ttagcaattt cacacttcac aagtatcgta acatatgtca tgttgacaca       360
     tgtgctgcac atctttccaa gtctaaggag aataaagaaa agcttcaagc cagaaatttg       420
     agattggttg tatcatccaa tgaatttttg gtggttgtta aagagcttaa tgatagcaca       480
     gttgacaatg ttgtttcatt taacaaagca tgtgctatca tgtcagctgg tatactcaaa       540
     catacctttg atgaggaatt tgactggaaa ttatcgaaat atgtaaagac gaacaacact       600
     actaaagtaa ttcctgatgt gaaaatcata aatcgactag cgggtcagat gggcttatca       660
     gctggtaatc catattactg gatgattgtg cctggttatg aattcttgta tgaactttat       720
     ccagctgagg tattagcata cactctgata aggctccaat acaggaaaaa cctaaatata       780
     ccagatagta tgactgatgc tgatattgtc agttctcttg ttatgaaaat gaatagaatt       840
     cataaacttg aacagaccag ctttgatgaa gccctaaatc ttataggcaa ggataacgta       900
     tccgaagctt atgtggaact tgcaagagat ataggaagca cgagcaaaac aaagagaaat       960
     gacgaagcaa ttcttaagtt taaggagtta attgcatcat tcctacctgc acttgaagca      1020
     gatagaattg caagtgctca tgtttgaact tgttattagt cttttctgat gtttgtatta      1080
     gtggtatgat taatttaata taatttataa tgtattttag tgtgtattaa tgtaatctaa      1140
     gtatgttatt agcaatatat atctatgtgt gtatctgcta aaaatacaaa attaaaaaaa      1200
     caagaatatg taaggtgata taaattgtgt aagtgtttat gtatgttctt caaattcctt      1260
     aaatatagac agtgttcaat atacttatta taatctattt tatatttatt atgaaaaaaa      1320
     accaaaaaaa ataaaaaaat cataaaaaaa caaaaagaag acatatatgt ttatatatgt      1380
     cgaaattccg tctcaaaaat ctatctgaaa cgtatttttc tttattgata ccattgttag      1440
     atttgttaag atttgactga tttagtttta aattatggga gaacactact                 1490
//