ID   AB697849; SV 1; linear; viral cRNA; STD; VRL; 1492 BP.
XX
AC   AB697849;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Fig mosaic virus NP gene for nucleocapsid protein, complete cds, isolate:
DE   JTT-Pa.
XX
KW   .
XX
OS   Fig mosaic emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1492
RA   Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.;
RT   ;
RL   Submitted (09-FEB-2012) to the INSDC.
RL   Contact:Shigetou Namba The University of Tokyo, Graduate School of
RL   Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657,
RL   Japan
XX
RN   [2]
RC   DOI:10.1099/vir.0.042663-0
RX   DOI; 10.1099/vir.0.042663-0.
RX   PUBMED; 22513386.
RA   Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D.,
RA   Yamaji Y., Namba S.;
RT   "Identification and characterization of two novel genomic RNA segments of
RT   fig mosaic virus, RNA5 and RNA6";
RL   J. Gen. Virol. 93(Pt 7):1612-1619(2012).
XX
DR   MD5; 240ee8815f56d38d35db08abc76da926.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1492
FT                   /organism="Fig mosaic emaravirus"
FT                   /segment="3"
FT                   /host="Ficus carica cv. Panachee"
FT                   /isolate="JTT-Pa"
FT                   /mol_type="viral cRNA"
FT                   /country="Japan:Tokyo"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: 3TerE, fwd_seq: ggagttcactact,
FT                   rev_name: 5TerE, rev_seq: agtagtgttctcc"
FT                   /db_xref="taxon:1980427"
FT   CDS             100..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:I2FFM3"
FT                   /db_xref="UniProtKB/TrEMBL:I2FFM3"
FT                   /protein_id="BAM13808.1"
FT                   /translation="MAPKSKTTSASSSKITPGQMQENTILLGSGSKLKAIKLTNVVNGK
FT                   LTHPETSDLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEKLQA
FT                   RNLRLVVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGILKHTFDEEFDWKLSKYVK
FT                   TNNTTKVTPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYELYPAEVLAYTLVRLQYR
FT                   KNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFDEALNLIGKDNVSEAYVELARDIGST
FT                   SKTKRNDEAILKFKELIASFLPALEADRIASAHV"
XX
SQ   Sequence 1492 BP; 535 A; 222 C; 257 G; 478 T; 0 other;
     agtagtgaac tcccataatt aactcaaaat caagcgaaat taacactaaa tttatattgg        60
     tattttactc caaagtactt ttattcatta gaatatatca tggcacctaa gagtaagact       120
     acatcagcaa gttccagcaa gattacccct ggtcaaatgc aagaaaacac tatcttactg       180
     ggctcaggtt caaagcttaa ggctattaaa ttgactaatg tggtcaacgg taagttaact       240
     catcctgaga catctgactt gaaacctata gatgtagaag tgcaagcttt tacctctgca       300
     agtcagaata ttagtaattt tacacttcac aagtatcgta acatatgtca tgttgataca       360
     tgtgctgcac atctttctaa gtctaaggag aataaagaga agcttcaagc tagaaatttg       420
     agattggttg tatcatccaa tgagtttttg gtggttgtta aagagcttaa tgatagcaca       480
     gttgacaatg ttgtttcatt taacaaagca tgtgctatca tgtcagctgg tatactcaaa       540
     catacctttg atgaggaatt tgactggaaa ttatcaaaat atgtaaagac gaacaacact       600
     accaaagtga ctcctgatgt gaaaatcata aatcgactag caggtcagat gggcttatca       660
     gctggcaatc catattactg gatgattgtg ccaggttatg aattcttata tgaactttat       720
     ccagctgagg tattagcata cactctggta agactccaat acaggaaaaa cctaaacata       780
     ccagatagta tgactgatgc tgatattgtc agttctcttg ttatgaaaat gaatagaatt       840
     cataaacttg aacagaccag ctttgatgaa gccctaaatc ttataggcaa ggataacgta       900
     tccgaagctt atgtggaact tgcaagagat ataggaagca cgagcaaaac aaagagaaat       960
     gatgaagcta ttcttaagtt taaggagtta attgcatcat tcctacctgc acttgaagca      1020
     gatagaattg caagtgctca tgtttgaact tgttgttagt cttttccaat gtttgtatta      1080
     gtggagtggt taatttagta taattgataa tgtattttag tgtatattaa tgtaatctaa      1140
     gtgtgttatt agcaatatat atctatgtgt ctatttgcta aaaatacaaa agtaaaaaaa      1200
     caaaaatata taagatgata taaaatgtgt aagtgtgtat gtatgttctc caagttcttt      1260
     aaatgtcaac agtgttcaat atatttatta taatctattg catatttatt atgagaaaaa      1320
     aaccaaaaaa agcaaaaaaa tcacaaaaaa aacaaaaaaa agacatatat gtatatatat      1380
     gtcgaacttc cgtttcaaaa gtctatctga cacgtatttt tctttattga taccattgtt      1440
     agatttgtta aattttgact gatttagttt taaattatgg gagaacacta ct              1492
//