ID   AB697846; SV 1; linear; viral cRNA; STD; VRL; 1491 BP.
XX
AC   AB697846;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Fig mosaic virus NP gene for nucleocapsid protein, complete cds, isolate:
DE   JTT-At.
XX
KW   .
XX
OS   Fig mosaic emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1491
RA   Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.;
RT   ;
RL   Submitted (09-FEB-2012) to the INSDC.
RL   Contact:Shigetou Namba The University of Tokyo, Graduate School of
RL   Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657,
RL   Japan
XX
RN   [2]
RC   DOI:10.1099/vir.0.042663-0
RX   DOI; 10.1099/vir.0.042663-0.
RX   PUBMED; 22513386.
RA   Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D.,
RA   Yamaji Y., Namba S.;
RT   "Identification and characterization of two novel genomic RNA segments of
RT   fig mosaic virus, RNA5 and RNA6";
RL   J. Gen. Virol. 93(Pt 7):1612-1619(2012).
XX
DR   MD5; 11977937c3bb0aba2f65b1d703b75b64.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1491
FT                   /organism="Fig mosaic emaravirus"
FT                   /segment="3"
FT                   /host="Ficus carica cv. Athenes"
FT                   /isolate="JTT-At"
FT                   /mol_type="viral cRNA"
FT                   /country="Japan:Tokyo"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: 3TerE, fwd_seq: ggagttcactact,
FT                   rev_name: 5TerE, rev_seq: agtagtgttctcc"
FT                   /db_xref="taxon:1980427"
FT   CDS             100..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:I2FFL8"
FT                   /db_xref="UniProtKB/TrEMBL:I2FFL8"
FT                   /protein_id="BAM13805.1"
FT                   /translation="MAPKSKTTSASSSKITPGHMQENTILLGSGSKLKAIKLTNVVNGK
FT                   LTHPETSDLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEKLQA
FT                   RNLRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGILKHTFDEEFDWKLSKYVK
FT                   TNNTTKVVPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYELYPAEVLAYTLVRLQYR
FT                   KNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFDEALNLIGKDNVSEAYVELARDIGST
FT                   SKTKRNDEAILKFKELIASFLPALEADRIASAHV"
XX
SQ   Sequence 1491 BP; 533 A; 223 C; 259 G; 476 T; 0 other;
     agtagtgaac tcccataatt aactcaaaat caaacagatc taacatcatt tttatattgg        60
     tattttactc caaagtactt tttttcatta gaatatatca tggcacctaa gagtaagact       120
     acatcagcaa gctccagcaa gatcactcct ggtcatatgc aagaaaacac tatcttactg       180
     ggctcaggtt cgaagcttaa ggctattaaa ctgactaatg tggttaacgg taagttaact       240
     catcctgaga catctgactt gaaacctata gatgtagaag tgcaagcttt tacctctgca       300
     agtcagaata tcagcaattt tacacttcac aagtatcgta acatatgtca tgttgataca       360
     tgtgctgcac atctctctaa gtctaaagag aataaagaga agcttcaagc cagaaatctg       420
     agattgatcg tatcatcaaa tgaatttttg gtggttgtta aagagcttaa tgatagtaca       480
     gttgacaatg ttgtttcctt taacaaagca tgtgctatca tgtcagctgg tatactcaag       540
     catacctttg atgaggaatt tgactggaaa ctatcaaaat atgtaaagac gaacaatact       600
     actaaggtgg ttcctgatgt aaaaatcata aatagactag cgggtcagat gggcttatca       660
     gctggtaatc catactactg gatgattgtg cctggttatg aattcttgta tgaactgtat       720
     ccagctgagg tattagcata cactctggta aggctccaat acaggaaaaa cctaaatata       780
     ccagatagta tgactgatgc tgatattgtc agttctcttg ttatgaaaat gaatagaatt       840
     cataaacttg aacagaccag ctttgatgaa gccctaaatc ttataggcaa ggataacgta       900
     tctgaagctt atgtagaact tgcaagagat ataggaagca cgagcaagac aaaaagaaat       960
     gatgaagcaa ttcttaagtt taaggagtta attgcatcat tcctacctgc acttgaagca      1020
     gataggattg caagtgctca tgtttgaact tgttattagt cttttctgat gtttgtatta      1080
     gttaaacaat aaatttaata taattaatag tatatcttag tatatattaa tgtaatctaa      1140
     gtgtgttatt agcaatatat atctatgtgt gtacttgcta aaaatacaaa attaaggaaa      1200
     acaaaaatat ataagatgat gtaagatgtg taagtgtgtg tatgtgttct tcaagttcct      1260
     taaatatcaa cagtgttcaa tatatgtatt atgatctatt ttatgtttat catggaaaaa      1320
     aaacaaaaaa aacaaaaaaa tcacaaaaag acaaaaaaaa gacatatatg tatatatatg      1380
     tcgaaaatcc gtcttgaaaa tctatctgac acgtattttt ctttattgat accattgtta      1440
     gatttgttaa gatttgactg atttagtttt aaattatggg agaacactac t               1491
//