ID AB697827; SV 1; linear; viral cRNA; STD; VRL; 7045 BP. XX AC AB697827; XX DT 25-APR-2012 (Rel. 112, Created) DT 02-JUL-2012 (Rel. 113, Last updated, Version 2) XX DE Fig mosaic virus RdRp gene for RNA-dependent RNA polymerase, complete cds, DE isolate: SB1. XX KW . XX OS Fig mosaic emaravirus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Fimoviridae; Emaravirus. XX RN [1] RP 1-7045 RA Namba S., Ishikawa K., Maejima K., Komatsu K., Yamaji Y.; RT ; RL Submitted (09-FEB-2012) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, RL Japan XX RN [2] RC DOI:10.1099/vir.0.042663-0 RX DOI; 10.1099/vir.0.042663-0. RX PUBMED; 22513386. RA Ishikawa K., Maejima K., Komatsu K., Kitazawa Y., Hashimoto M., Takata D., RA Yamaji Y., Namba S.; RT "Identification and characterization of two novel genomic RNA segments of RT fig mosaic virus, RNA5 and RNA6"; RL J. Gen. Virol. 93(Pt 7):1612-1619(2012). XX DR MD5; c4bac115e83b1674a082c4692513f4f0. XX FH Key Location/Qualifiers FH FT source 1..7045 FT /organism="Fig mosaic emaravirus" FT /segment="1" FT /host="Ficus carica" FT /isolate="SB1" FT /mol_type="viral cRNA" FT /country="Serbia" FT /collection_date="2010" FT /db_xref="taxon:1980427" FT CDS 46..6939 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:I2FFK1" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="UniProtKB/TrEMBL:I2FFK1" FT /protein_id="BAM13786.1" FT /translation="MEAKKGEIFESAINNIRSGDALPPDLMSKFLHIAGKTLKGYTITS FT KKRNIEKIYKQCTSDVHFHKDLVSLSEGILHAPPNQSQIDIAATLIGLLELSRHDLLIL FT CINELLQNQGYTIMGYDVPIKDVFPEIDSILTPDIFFMDDYDYYILEVKVRGKKTDLSV FT YYNRYKSVVDGSQKHIKVSVFNVSRSGYIEMGDYKISNLINIDPSTIEDITYCIDLCQN FT LREKYGRYPEFGFYMQDGMLADSSEPFIESGFKQMVFEHKNYTEISSLFGSKWSEIIND FT TDNISLISNPEDTVEKLLDAQKVLYQDCSDRYIEFQSHLEKNYMSTNSYNKTYLNDCNL FT SKILDKKNESLYNIVDTYKPSIYIPIAKTVFLDKFGFSRLDFYKSAFVDIQERGDSYTK FT SVINLVNTIFNSVSIDLLIKKNNEIDPETYKDVLTPDFCKYINDTSNKFKKIATVSNIT FT SDTSILNNNAFSINHHVDKYMKENICGFQRKHYDTKIPKKSCISIKNSEDDALELLKLM FT GEIFNSEHYEGVYANDLVDIEVDNMNSHVCNLPKNCKTKYLDHLYSQHNIFKALISLNT FT VNSHKFRLIQTADPCTILIMLPNADTLRSAPLRYFTLTIIDKKDNTSYHANKLLGIAHE FT LLIGRNYNVILSKVISLDVTRLKLLNHSFGKYCLIMSYYSTIKKDLRHQIHFMVWILCQ FT FITISSLSITDTYKNFVMAIYSDYSNIDNLIDDKLESRPTTLGHVIILQRCFHGLLQAS FT MQLKVINKNKNSEEIDERGDLIETGFNNNLSLKLPISGISVNNPREIIHEAFMLFYLGN FT KGLHGSPQELLNLYYTPYKFEQEYTDVIKRYRTILQEDGNVSNMSVSYDVMKKTSLAAY FT SNIYNKKENIRQSICNELGINKPLLALKQFSSTKSMVSNTKQIEIELPKKLPDNLDLYG FT LENIISNCKIDEDMEFMRFINSEIYRINSKRLKNEMSSSTREEKREVTLLPEIYIETKK FT GVKFLRIKRHEYTRLINGDYIRQNNAKVFDEFYKLSEEYELVSLKDAYSKLIHDDELLI FT RIFYKDQRTADDREIYTGNAQTRLCLYPIEKTYKAICKHIPGEAITISGDQKQKKLLEQ FT RLQLIKEKKQKIKDKKWAEIYSVSSDASKWSARDVFLKFIITISVNPYLHPDEKWFLLY FT LCMTYYTKKIVFTDTIFNKMVDLADKDKHDKYEFMTEDFTQNYFTVRSNWLQGNLNMIS FT SFVHHCSTLYTETMLKILSDKNSLECSMTSMVHSDDSTYDFLICRDKKSKNRYVKDENI FT GKLIISLITYSNRFHCITLNEKKTYISTFYKEFLSTIIVGNELFFFYLADLLPLTSDTS FT YASPLQDLASYSGYINNSFSHACPREMIQTAIILINHLTLSTYNMQYTSDKNPRLNIQS FT TDLPIQIYPRYKVPIEMAGMIPYYSADAFNILNDIVLKLGYNDKLQSELVEDILTEELI FT NDYLSIIKKHTPMIVKYIKSCILCMDYSQYERDDADPYNIIDYDLSQKSIINVISLNKG FT QRLKKTYTYKKYLESETNVRLISAIHPEWCVIKPADPELIKSNILQNYTNPNFRDGLIF FT STSAIDYGRRVISSNKNMYTISSHIMEKDKAKNIKTVYNDLNKKIDGVEITAKDLQRYL FT SLYLLSDKKISMAIQVFFSKIETVTMARPSYNKVVQPRSIYSEDFGRYSNNSLIESLLT FT SRYCKITTVDPKVEKFVDVSDYVLERIGDIKLYESPEDIDDDYINYYHFKYPHSDEILL FT DVEPISDLGDLELKIYKNKLKFMSLIVKYYTDIKKTIENPNYNIPNYPSPSSIIMTIDS FT LLKKDEISTKVYLSNVKSIKYDDYLLTRYGMYAHNDFHIKYKLGYKVKIASSTKISNTL FT QTYKDTYEPVAFVTKLISRNLELFTSLKDNEDFVTGHYKFNDMINTLQNSRDINSSALL FT LMLDKIPNSRFMITLLNDNRVYNHWLIPTNSLQEDPGASLAYYMCQGNIMKVRTFTRGG FT SIVFTMTYYRYVNRDLGALTNIKKKISMDYVELLRKSLVTNRVEPTSLYDTYNINEYGR FT YTEYRGPRVFNVAQITYAKILNIKPAYTEIDDQVKLILNIGTNEDHFTFDIRLRTYIDD FT EYYLNCLLDNLHIERDNILGYLCEGTFFHRYPDYLKRILATLGPNQLVSLMSNYTDSDC FT ITDNIDINRYGFLMEISNYFREKCNIYMAELCETLEIVAMSTNVNIMNVRNPEKFINNC FT NKIKLHPLCHEYVIHKYRADEEAPYYKLFRLVMKYRYNRSPVEKIILFIILIFRFYIHE FT YIDVEAEFEY" XX SQ Sequence 7045 BP; 2677 A; 1005 C; 1133 G; 2230 T; 0 other; agtagtgaac tccctttaat tactcaaaaa tcaaaaaaaa taacaatgga agctaaaaaa 60 ggtgaaatat tcgagagtgc gatcaacaac ataagatctg gagatgcatt accacctgat 120 ctcatgagta agtttttgca catagctggc aagacattga aaggttacac aatcacatcc 180 aagaaaagaa atattgaaaa gatctataag cagtgcacta gtgatgttca tttccataag 240 gatcttgtgt cactttcaga aggaatattg catgcaccac ctaaccagag tcaaattgat 300 atagctgcca ctttaattgg tttgcttgaa ttatctaggc atgacctgtt gatcttatgt 360 attaatgagc tgttgcagaa tcaaggctac accatcatgg gttatgatgt gccaatcaag 420 gatgtgtttc ctgaaattga tagtatattg acacctgata tatttttcat ggatgattat 480 gattattaca tactagaagt taaagttaga ggaaagaaaa ctgatttatc tgtttactat 540 aataggtata aatcagttgt tgatggttca cagaaacata ttaaagttag cgtctttaat 600 gtttcaaggt ctggttacat tgagatgggt gattacaaaa tttcaaatct tattaatatt 660 gatccatcta ctattgagga tataacatac tgtatagacc tatgccagaa cttaagagaa 720 aagtatggta ggtatcctga gttcggattt tatatgcaag atggtatgct tgctgatagt 780 agtgaaccat ttattgaatc tggttttaaa cagatggttt ttgagcataa aaattacaca 840 gaaatttcga gtctattcgg tagcaaatgg agtgaaatta taaatgacac tgataatata 900 agtctgatat ctaatccaga agacactgtt gagaagttgt tagatgctca aaaggtgcta 960 tatcaagact gttcagatag atatattgaa tttcaatctc atttagaaaa aaattatatg 1020 agcactaatt cttataataa aacgtattta aatgactgca atttgtcaaa aatattagac 1080 aagaaaaatg aatctctata taatattgtt gacacataca aaccttctat ttatatacca 1140 attgcaaaaa cagtatttct tgacaagttt gggttttcaa gattagactt ctataaatca 1200 gcatttgtgg acattcagga aagaggagat tcttatacca aatctgttat caatctagtt 1260 aatactatat ttaatagcgt ctcaattgac ttgctcatta aaaaaaataa tgagattgac 1320 ccagaaactt acaaagatgt cctaacacca gatttctgta aatacataaa tgatacaagc 1380 aataagttca agaaaattgc aacagtatct aacataacaa gtgatacaag cattctgaat 1440 aataatgcgt tttcaatcaa ccatcatgtg gataaataca tgaaagaaaa tatttgtgga 1500 ttccagagga aacattatga tacaaaaatc ccaaagaaga gttgcatatc tataaaaaat 1560 agtgaagatg atgcattaga gttgttaaag ttgatgggag agatattcaa tagtgaacat 1620 tatgaaggag tatatgcaaa tgacctagta gatattgagg ttgacaatat gaacagtcat 1680 gtatgcaacc ttccaaaaaa ttgcaaaact aaatatttag atcacctcta tagccaacat 1740 aatatattta aagcattaat atcattaaac actgtcaatt ctcataagtt tagattgatt 1800 caaacagcag acccatgcac aatattgatt atgctcccaa atgcagacac tctgagatct 1860 gcaccactta gatattttac actcacaata attgataaaa aggataatac gagttaccat 1920 gcaaataaac tactgggaat agcacatgag ttattaattg gtcgaaatta caatgtaata 1980 ctatctaaag ttataagctt agatgtcaca aggcttaagc tattaaatca ttcatttggc 2040 aaatattgtt taattatgtc ttattattcc actataaaaa aagatttgag gcaccagatc 2100 catttcatgg tatggatatt atgccagttt attactatat catcattaag cataactgat 2160 acctataaga attttgttat ggctatatat tctgattatt caaatattga taatctcatt 2220 gatgataaat tagagtctag acccacaaca ttaggacatg taataatctt acaaaggtgt 2280 tttcatggtt tactccaagc ttctatgcag cttaaggtaa ttaataaaaa taagaacagt 2340 gaagagattg atgaaagagg tgatttgatc gaaactggat ttaataacaa tttatcatta 2400 aagttgccaa tatcaggtat tagtgttaat aatcccaggg aaattataca tgaagcattc 2460 atgttattct atctaggtaa taaaggtctc catggatccc cacaagaatt gttgaacttg 2520 tattacacac catataaatt tgagcaggaa tacacagatg taataaagag atataggact 2580 attctgcaag aggatggaaa tgtttccaat atgtcagttt catatgatgt catgaagaaa 2640 acatcattag cagcttattc aaacatttat aataaaaagg aaaacataag gcaatctata 2700 tgtaacgaat taggaatcaa caaaccacta ctggcattga aacaattttc tagtacaaaa 2760 tctatggtat ccaatacaaa gcagattgaa atagaattac caaagaagtt accagacaat 2820 ctagatctat atgggttaga aaatattata tcaaactgca aaattgatga agatatggaa 2880 ttcatgagat ttataaattc agaaatttac agaatcaatt caaagaggtt aaaaaatgag 2940 atgagtagtt ccacaagaga agaaaagagg gaggttactt tactacctga aatatatata 3000 gaaacaaaga agggtgtgaa gtttttaagg ataaaaagac atgagtatac gagattaatc 3060 aatggtgatt acattcgaca gaataatgca aaagtatttg atgaatttta caaattatct 3120 gaggagtatg aacttgtatc actcaaagat gcatattcca agttaataca tgatgatgaa 3180 ctattgattc gaatatttta caaagatcag agaactgctg atgataggga aatatataca 3240 ggtaatgctc aaactagact ttgtttgtat ccaatagaaa agacatataa ggcaatctgt 3300 aaacatattc caggtgaagc aataacaatt agtggtgatc aaaagcaaaa aaagctattg 3360 gaacaaagat tacagttgat taaagaaaag aaacaaaaaa tcaaagataa aaaatgggct 3420 gaaatctatt ctgtgtcttc ggatgcatca aaatggtctg caagagatgt gttcttgaaa 3480 tttataatta caatatctgt aaacccatat ctccatcctg atgaaaagtg gtttttatta 3540 tatctatgta tgacatacta caccaagaaa attgtattca ctgatactat atttaataaa 3600 atggttgatc ttgcagacaa agataagcat gataagtatg agtttatgac tgaagatttt 3660 acacagaatt acttcacagt aaggagcaac tggttacagg ggaaccttaa tatgatatca 3720 tcttttgtcc atcactgctc cacattgtac acagagacta tgttgaagat tttatcagat 3780 aaaaattctc tggagtgttc tatgacatct atggttcatt ctgatgattc aacatatgat 3840 tttttaatat gtagagataa aaaatcaaag aatagatatg taaaagatga gaacatcggt 3900 aaactcatca tatctttgat tacatactca aacagatttc attgtataac attaaatgaa 3960 aaaaagacat atattagcac attttataaa gagtttcttt ccacaatcat agttggtaat 4020 gaattattct ttttttactt agctgattta ttaccattga catcagacac aagttatgct 4080 tcaccattac aagatttagc atcatactct ggctacataa ataactcttt ttcacatgcc 4140 tgcccaagag aaatgatcca aacagctatt atactaatta atcatttgac attatccaca 4200 tacaacatgc aatacacatc tgataaaaac ccaaggttga atatacagtc cactgattta 4260 ccaatccaaa tataccctcg ttataaagta cctattgaga tggctggtat gataccttac 4320 tactcagcag atgcatttaa tattctcaat gatatagtat tgaaattagg ttataatgat 4380 aagcttcagt cagaacttgt agaagacatt cttactgaag agctcattaa tgattatctc 4440 agtataataa aaaaacatac accaatgatt gttaaatata ttaagtcatg tatcttatgt 4500 atggattatt cacagtatga gagagatgat gcagatccat ataacataat agattacgat 4560 ttaagtcaga aatctattat taatgttatt agccttaaca aaggccagcg attaaagaag 4620 acttatactt acaagaaata tttagaatca gaaacaaatg tacgattaat atctgccata 4680 catcctgaat ggtgtgtgat aaaaccagct gacccagagt tgattaagtc aaatatacta 4740 caaaattaca caaaccctaa ttttagagat ggattgatat tttccacttc tgcaattgat 4800 tatggtcgta gagttattag ttcaaataag aacatgtata ccataagttc acatatcatg 4860 gaaaaggata aagcaaaaaa tataaaaaca gtatacaatg atttaaataa aaaaatagat 4920 ggagttgaaa taacagccaa agatctacaa agatatctaa gcctgtatct gctaagtgat 4980 aaaaaaatat ctatggccat acaggtattt ttttctaaga tagaaacagt gacaatggct 5040 agaccatcat ataacaaggt tgtgcaacca aggagtatat attctgaaga ttttggtaga 5100 tactccaaca actcattaat agaatctctc ttaacttcaa gatattgtaa aataaccaca 5160 gttgatccca aagtcgaaaa atttgttgat gttagtgatt atgttctaga gagaattggt 5220 gatattaaat tatatgagtc accagaagac attgatgatg attacatcaa ttattatcat 5280 ttcaaatatc cccattctga tgagattctg ttggatgttg agcctatttc tgatttaggt 5340 gatcttgaac ttaaaattta caagaataag ctgaaattta tgtcattaat tgtgaagtat 5400 tacactgata taaaaaagac cattgaaaac cccaattata atattcccaa ctatccatct 5460 ccttcttcta taataatgac aatagattca ctgctaaaaa aagatgaaat cagtaccaaa 5520 gtgtacttgt caaatgtgaa atctatcaaa tatgatgatt acttgttgac tagatatggt 5580 atgtatgctc ataacgattt tcacattaag tacaaattag gctataaagt taaaattgca 5640 tctagcacaa agatttcgaa tacattacaa acatataaag atacatatga gccagttgcg 5700 tttgtcacaa aactaatatc taggaattta gaattgttta cttcactaaa agacaatgag 5760 gattttgtaa caggacatta taaattcaat gatatgatta acacacttca gaatagtcga 5820 gacatcaata gcagtgcatt actgttaatg ttggataaaa taccaaactc aaggttcatg 5880 atcacattac ttaatgataa cagagtttac aaccactggc tgataccaac aaatagcttg 5940 caggaagatc ctggtgcttc tttagcttat tacatgtgcc aaggtaacat aatgaaagtc 6000 agaactttta ctagaggtgg ttctatagtg tttacaatga cttactacag atatgtaaat 6060 cgagatcttg gtgctcttac taatataaaa aagaaaatat caatggatta tgttgagtta 6120 ttaaggaaat ccctagtgac aaatagagtt gaaccaacat ctttatatga tacttataac 6180 ataaacgagt atggtagata tactgaatat agaggcccaa gagtgttcaa tgttgcacag 6240 attacttatg ctaaaatatt aaacattaag ccagcttaca ctgagattga tgatcaagta 6300 aagcttattt taaacattgg aactaatgaa gatcatttca catttgatat acgattgcgt 6360 acatacattg atgatgaata ttatctaaat tgtttgctag ataatttgca tatagagcgt 6420 gataacattt tgggttatct atgtgagggc acatttttcc acaggtatcc tgattacctt 6480 aagcgaattc ttgcaacact cggaccaaat cagcttgtgt ctctaatgtc taactacact 6540 gattctgatt gtataacaga taacatagat ataaatcgat atgggttctt aatggaaatt 6600 agcaattact ttagggagaa atgtaatata tatatggcag aattatgtga gacattggaa 6660 attgtagcaa tgagcaccaa tgtaaatata atgaatgtta gaaatcctga gaagtttata 6720 aataactgca ataaaattaa gcttcatcca ttatgccatg agtatgtgat acataaatat 6780 cgtgcagatg aagaagcacc atattataag ttatttagat tagtcatgaa atacagatac 6840 aatagaagtc ctgttgaaaa gatcatttta tttattatct tgatatttag attttatatc 6900 catgaatata ttgatgttga agctgaattt gaatattgat taatctttga tttgtgcgta 6960 atcttcatgc tttgatttat ttataacctt tatgcttttt attgattttt atatattttt 7020 gttatattaa agggagaaca ctact 7045 //