ID AB697482; SV 1; linear; genomic RNA; STD; VRL; 6544 BP. XX AC AB697482; XX DT 30-MAY-2012 (Rel. 112, Created) DT 30-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Potato virus T genomic RNA, complete genome, isolate: Japanese. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; OC Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-6544 RA Namba S., Komatsu K., Yamaji Y.; RT ; RL Submitted (06-FEB-2012) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Laboratory of Plant RL Pathology, Department of Agricultural and Environmental Biology, Graduate RL School of Agricultural and Life Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo RL 113-8657, Japan XX RN [2] RC DOI:10.1016/j.virusres.2012.02.019 RA Komatsu K., Hirata H., Fukagawa T., Yamaji Y., Okano Y., Ishikawa K., RA Adachi T., Maejima K., Hashimoto M., Namba S.; RT "Infection of capilloviruses requires subgenomic RNAs whose transcription RT is controlled by promoter-like sequences conserved among flexiviruses"; RL Virus Res. 167:8-15(2012). XX DR MD5; 7d68a3526e025a304e6c6d33533febfe. DR EuropePMC; PMC6256546; 30533781. XX FH Key Location/Qualifiers FH FT source 1..6544 FT /organism="Potato virus T" FT /isolate="Japanese" FT /mol_type="genomic RNA" FT /country="Peru" FT /db_xref="taxon:36403" FT CDS 133..4899 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:I4DEZ2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I4DEZ2" FT /protein_id="BAM16482.1" FT /translation="MRNSVLNLMQVISRLRSDKGIGLFDFACSSVVKERLTKAGIPVSA FT FCNREHSHPASKMIENHLLYNILPNYLNLKNYTAISIKDSKVRKLLKNGVDSLETFNRL FT FSCKDALRYVDPETCDMDKFIARVHHSTRIFLFDELHYWSMNSLSDFLDRSNVKELLAT FT IVFPIEILLGSKRSLNPELYEFEISRGKLHFFPDGCTSESYSQPKDCDILKVNRIVTKT FT GKIFSVELIHTIGANHMVMIKEGSFDVDSERFFDRSSALTTSLLMPTRAGKALRIRRKF FT LLRLIIYLFSLKKPDHHSAIAKIRQSSDDSIFCDEIMLADHVGKIFEKLDPASPFGVKG FT VFDLLTSIFKDIFLLDGLFNWSDRRKSEKFVEFMRALDYQTNKVVTCTFSGGVMRSGFL FT AEFFLDNDCEASEGLDEVISRFDTFFDPKKEYSAHALRVNIKDRTPSPYGPMKARTPSV FT VLHREYITKVELSSKAEKVNVLKERLTGEVSFEEARLQRMWYSDSQFVAGLAPKLRYVK FT MLTWKKDQKLFSEFPSEESNEVEMEDAFEYEEKENSEEEGPKERDENGANSEECEQLDS FT EDDVGSFEYEETKADSYEIDFEAILNRVNSGGLRGVCLLDALAKITGTKREITLSILLG FT RDGTWADWFLKDKGATFDDVFKAVSDLDLNCTICTKGGSFNAHVNRNYKHNFLYLFDEH FT VSLERPKVMLFEQVRHQKIDFLGAFEKCPGAGKFRYEALRERGSLLASALKDNLTGVIS FT SKFNWDPKCEFVDIEKEILVVAGFAGSGKTRGICQIVKSMFNNKKTLVLSPRKNLADDW FT VKNLANLHRPSHVKVMTFEAGLRRVQKSSLIVIDELSLMPNGYLDMLINMNEEATFITL FT FDPLQARYHAKSDVLRVSPENDVDRIKVPKYLFFSKRMSSELDFFDVRCSSDQKKWELH FT GKQYREPAALFRDIKGQEFTILSPSFETAREMSKYADIKDGCKSMTFGESQGLTVNKAV FT IVVDQDLVATSVLHWIVALTRSRQGFVILVHKVFDMKTLIQPVQNSIIGLVLRGVKVSR FT EHLINTAGKCLSEAEIVEELETFKRTEEDEDLLEGDPWLKGQLFLCQSVELDEVTPEEP FT LRHESPPRTHLPLPVEGLTPLLMSNVKAREDREFITPSGWSKQFRDDKENVDWRNVSYA FT DAFETIYPKHEASDDITLWAAIQKRIVMADPFRNAMKLQKVVPISAEIFNEMNKILLLN FT PHVSVDRDQVYKEFLRKRLNKSKKLIESHSERSSDDWPIDHFFLFMKSQLCTKFEKRFV FT DAKAGQTLACFSHKLLTRFGPAFREFEKKFTANLPPSWYIHTMKNFDQLNNWVINYVDQ FT EEGTESDYEAFDRSQDAIILGLEIECLKLFGWDQDLIDDYRKLKLWMGCRLGAIAIMRF FT TGEFGTFFFNTIANIAFTCLRYNITRDTVIAFAGDDMYASGKLEIRKDREDLLAHLTLK FT AKVQFTEKPMFCGWYIKKMGIVKEPRLVLERWLIAERKKVIDQCFINYSIEVSYGYRLG FT EYLWEYFDNLEDFQAIVRLVIKKKKQLPPAIRRIFETSNGVDFSGEVQETMGGEGEHHG FT SCGLWCNLH" FT CDS 4808..5884 FT /codon_start=1 FT /transl_table=1 FT /gene="MP" FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q85215" FT /protein_id="BAM16483.1" FT /translation="MELISVEKFRRQWEERESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDQATLE FT DLEEVRRSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQKSSSVRSASLPRFS FT CSERLERGFESESLAGLVLDQKYGPNNFCADKRRSPESDSGSLQQSMGRSSHSGSEGWG FT KGTDVAIPLRKNRNIFSE" FT CDS 5718..6359 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q85216" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q85216" FT /protein_id="BAM16484.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDGQATQALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDTEIASEDLQIGMSAASAGPPPVAAAPISLTFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 6544 BP; 2017 A; 1139 C; 1576 G; 1812 T; 0 other; ggataagctt gccggtaagc cgaaaaacta cctggccttg aacctcaaaa gacactaatt 60 gtctacaatt aaaaatgtct ttctccttca ggacgcctgc agaagttttc gttcagtctt 120 tgcctaaaga atatgcggaa cagtgtttta aatctcatgc aagtaatttc cagactccga 180 tccgataagg gaattggctt atttgatttt gcatgttctt ctgtggtcaa ggaaagactc 240 actaaggccg gtatacccgt ttctgccttt tgcaatcgag aacattctca ccccgcatct 300 aagatgattg aaaaccatct cctgtacaat attttaccta attacctgaa ccttaagaat 360 tacaccgcaa tttcaattaa ggattccaaa gttagaaagt tgttgaagaa tggtgtagac 420 agtttagaaa ccttcaatag attatttagc tgtaaagatg ctttgagata tgtagatccc 480 gaaacttgtg atatggataa attcatagct agggttcatc attcaactag gatatttcta 540 tttgatgagc tccattactg gtccatgaac tccctatctg actttttgga taggtctaat 600 gtcaaagagc tgttggccac tatagttttt ccaattgaaa ttctgcttgg atcaaaaagg 660 agtttgaatc cagaactcta tgaatttgag atttcaagag gaaagttaca tttctttcca 720 gatggttgca cttcagagtc atattcacaa ccaaaagatt gtgatatctt gaaggtgaac 780 agaattgtga ctaagactgg gaaaatcttc tcagttgagc ttattcacac cattggggcc 840 aatcacatgg tgatgataaa agaaggttcc tttgatgttg actcagaaag gttctttgac 900 agatcctcag ctttgaccac tagtctttta atgcccacta gagcaggtaa ggcccttaga 960 atcagaagga agtttctttt gagattgata atttacctgt tttcactgaa aaaacctgat 1020 catcactctg caatcgccaa gatcaggcaa agctcagatg actctatctt ttgtgatgag 1080 ataatgttgg ctgatcatgt tggcaagata ttcgagaaat tggatcctgc tagccctttt 1140 ggagtcaagg gagtctttga tttgttaaca agtatcttta aagatatttt cctactcgat 1200 ggtctcttca attggtctga tagaagaaaa tctgagaagt ttgtagaatt catgagagct 1260 ttagattatc aaaccaacaa ggttgtcacc tgcacttttt cgggtggagt catgaggagt 1320 ggcttcttag cggaattctt cttggacaac gattgcgaag cgagtgaagg gctggatgag 1380 gtaatttcaa ggttcgacac tttctttgac ccaaaaaaag aatattcggc acatgctttg 1440 agggtgaaca tcaaggacag gacaccaagc ccatatggtc caatgaaggc aagaactcca 1500 agtgtcgtac tgcatagaga gtacataaca aaggttgagc tctctagcaa ggcagagaag 1560 gtcaatgtct taaaagagcg gttgactgga gaggtgtctt ttgaagaggc caggttgcag 1620 agaatgtggt actccgattc tcaatttgtt gctgggctgg cgccgaaact gagatatgtc 1680 aagatgttga catggaaaaa agatcagaag ctgttcagtg aattcccctc agaagagtca 1740 aatgaagttg agatggagga tgcatttgaa tatgaggaaa aggagaactc tgaagaagag 1800 ggaccaaaag agagggatga gaatggagca aattctgaag agtgtgagca actggattca 1860 gaagatgatg ttggttcatt tgagtatgag gaaacaaagg ctgattccta tgaaattgac 1920 tttgaggcaa ttttaaatag agtcaactca ggaggtcttc gaggtgtttg cttgttggat 1980 gccctggcaa aaataactgg gacaaaaaga gagatcaccc tctctattct tctagggagg 2040 gatggcacct gggccgattg gtttctgaag gacaagggcg ccacttttga tgatgtcttc 2100 aaggcagtct cggatcttga tctgaattgt acaatatgca cgaaaggggg ctcattcaat 2160 gcacatgtga ataggaatta taagcataac ttcctttatc tatttgatga acatgttagc 2220 ctggagaggc caaaagtcat gctctttgaa caggtaagac atcaaaagat agactttttg 2280 ggtgcctttg aaaaatgtcc cggggctggt aagttccgct acgaggcgtt acgtgagaga 2340 ggaagtctgc tagcttctgc tttaaaagac aatctcactg gagtcatttc aagcaaattc 2400 aattgggacc ccaaatgtga gttcgtggat attgaaaagg aaattcttgt tgtggctggt 2460 tttgcaggtt ctggaaagac tcggggcata tgtcaaatcg tcaagagcat gtttaacaat 2520 aagaaaactc tcgttcttag tccaaggaag aatctggcgg atgattgggt taagaacttg 2580 gccaatttgc acaggccaag tcatgtgaaa gtaatgacat ttgaagctgg tttgaggcga 2640 gtgcagaagt cttctctaat tgtgatagat gagttatctt tgatgccaaa tggttatcta 2700 gacatgctca taaatatgaa tgaggaggcc acattcataa cactttttga tccactgcag 2760 gctagatacc atgcaaaaag tgatgtgctc agggtgagcc ctgaaaatga cgttgacaga 2820 ataaaggtgc cgaaatacct cttcttctca aagagaatga gttcagagct agatttcttc 2880 gatgttagat gctcatctga tcaaaaaaaa tgggaacttc atggaaagca atatcgtgag 2940 ccagccgcac tattcagaga catcaaaggt caggaattca caatactatc accatcattt 3000 gagactgcta gagaaatgtc caagtatgca gacatcaagg atgggtgcaa atcaatgacc 3060 tttggtgaat cacaaggtct aacagtcaac aaggcagtga ttgtagttga ccaagatctg 3120 gttgcaacat cagtgttgca ttggatagtt gcattgacta ggagcagaca gggttttgtc 3180 atactggtgc acaaagtctt tgacatgaaa acattgattc aacctgttca gaattctata 3240 attggtctcg tgctaagagg ggttaaggtt tcaagagaac atcttatcaa cacagctgga 3300 aagtgtctgt ctgaagcaga aatagtggag gagttggaga ccttcaaaag gacggaagag 3360 gatgaagacc tgctcgaagg tgacccttgg ttaaagggtc agctctttct ttgtcaaagt 3420 gttgaattgg atgaagttac acctgaggaa ccattgaggc atgagagccc acctaggaca 3480 catttacctc tcccggttga aggattgaca ccgcttttaa tgtcaaatgt taaggcaaga 3540 gaggatagag agttcataac tccaagtgga tggagcaaac aattcaggga tgataaagaa 3600 aatgtggact ggagaaatgt ctcatatgct gatgcttttg aaacaattta tccgaaacat 3660 gaggcaagtg atgatataac tttatgggcc gccattcaaa agagaatcgt gatggcagat 3720 ccattcagaa atgcaatgaa gctgcaaaaa gtggtaccaa tctcagctga gattttcaat 3780 gaaatgaaca aaatacttct cttgaatcca catgtgagtg ttgatagaga tcaagtctac 3840 aaagagttct tgagaaagag gttaaataag tcaaagaagt tgatagaatc ccactctgaa 3900 aggtcatctg atgattggcc aatagatcac ttcttcctgt ttatgaagag ccagctatgt 3960 acaaagttcg agaagaggtt tgtggatgca aaggctggtc aaacactggc ttgtttttcg 4020 cacaagttat tgacaagatt tgggcctgca tttagagagt ttgaaaagaa gttcacagca 4080 aatttgccgc catcatggta tattcacaca atgaagaatt tcgatcaact gaacaactgg 4140 gtcattaact acgttgatca agaagagggc actgaatctg attatgaagc tttcgataga 4200 tcacaggatg caatcattct aggtcttgaa atagaatgtc tgaaattgtt tggatgggat 4260 caagacctga tcgatgatta cagaaagctg aaactttgga tgggatgtag gttgggggca 4320 attgcaatta tgagattcac aggtgaattt ggaacattct ttttcaacac aattgcaaac 4380 atcgcattca catgtttgag gtataatatc accagagaca ctgtgattgc gtttgcagga 4440 gatgacatgt atgcatccgg aaaactcgaa atcaggaaag atagagaaga cctgctggcc 4500 catctaactt taaaggcaaa agtacagttc acagaaaagc caatgttctg tgggtggtac 4560 atcaagaaga tgggaattgt gaaggagcca agattggtac ttgagaggtg gttgatagct 4620 gaaagaaaga aggtgataga tcaatgcttc atcaactact caatcgaggt atcttatgga 4680 tacagattag gtgagtacct ctgggagtat tttgataatt tagaggattt ccaagcaata 4740 gtgagattgg tgataaagaa gaagaagcaa ctgccaccag ctataagaag gatttttgaa 4800 acaagcaatg gagttgattt cagtggagaa gttcaggaga caatgggagg agagggagag 4860 catcacgggt cctgtggact ctggtgcaat ctacactaac tccgcgtttc acaatctgaa 4920 gaccaaatgg cacgtttaca agtctgagtg cagtattggt cttgatttgc ccgataacgg 4980 aaaaataata tcaaaggaca tccccctctt tgatcaagag gagattgata acatcatgaa 5040 agacgataaa caggtattcg tccatctggg agcctttgtg ttcggacttg ttgcacactt 5100 tcctgtcgat gaggaagtgg aaggattagt ctctatcatt gacaaacgtc ggactgatct 5160 aaggagggca accctagctt gcaggaaaat taaatttgtg aatggaagat gcgctttcat 5220 gatgaaacca aacttttcag tcaggaagga ggatttaagg gatggtgaca ctttttgtgc 5280 cgctatcaaa atcaaaaacc ttggctttga aggtgggttc tttccatttt cagcatgtgg 5340 cggagtgatt tacagaacct caaatgtgag ttttgcacat gctgttgaca aaacctttgc 5400 ttctaggact gttcatgatt tggtgggtac tgatatactc tctttggatc aactggacca 5460 agccactctg gaggaccttg aggaagtgag aaggagcccc attctaaggt taaccgctcc 5520 tgatgagaga gtaatgatag aaagagggaa ttggttccag aagaaaccgg caataaggag 5580 gagaagtttt gggaaaagga gaccccaaaa aagttcgtca gttaggtcgg cgagtttgcc 5640 tcgattttca tgttctgaga ggttagaaag gggctttgaa tcagagagtc tggctggatt 5700 agtgctagat cagaaatatg gacccaacaa cttttgtgca gataagagac gaagtcctga 5760 atctgacagt ggcagcttac agcagtcaat gggacggtca agccactcag gctctgaagg 5820 atggggcaaa ggaacagatg ttgcgattcc tcttcggaag aatcgcaata tcttcagcga 5880 gtagaaacac catctggcct gacacggaga tcgcgtcgga ggatctccag ataggtatgt 5940 cagcggcttc agcgggtcca cctccagtgg ctgctgctcc gataagcctt acatttaggg 6000 taaattttaa ttcttatgtc aaaatgctaa tagctttgtc caacacttca acaaattcct 6060 ttgtaaagaa taaaacactc agacaaatgt gtatgccttt tgcaaaatat gcttatggat 6120 acttatctga aatgggctat gcaacttggg catatgagaa aatgcccaaa ctttgtcgaa 6180 aggctaaatg ggttgctttc gattttgcat ctgggttgtt gattgataca acaatgcagt 6240 tgaatgatga tgaaaagacc gtcattcaag gtctgggagc taggttattc aaaactcaac 6300 agtccattca aattgctgat tccacaatgg acggtgaagc tatcaatcgt gaaatttgac 6360 tgagaaagag gagaagagtt ggtcgtttgt taaatccggc ataattggtc gcggtcttga 6420 gggttgactg gccctcattt gaataaattt aaaatctgca taattgatcg cagtctaggg 6480 agttgatatg ctccccccga tgttcttaat ctagggtttg catggttttt caagttttta 6540 aagc 6544 //