ID   AB693982; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   AB693982;
XX
DT   12-FEB-2012 (Rel. 111, Created)
DT   12-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Cymbidium mosaic virus CP gene for coat protein, partial cds, isolate:
DE   Gunung Sindur.
XX
KW   .
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-672
RA   Lakani I., Suastika G., Damayanti T., Mattjik N.A.;
RT   ;
RL   Submitted (21-JAN-2012) to the INSDC.
RL   Contact:Irwan Lakani Tadulako University, Agroteknologi; Kampus Bumi
RL   Tadulako Tondo, Palu, Central Sulawesi 94118, Indonesia
XX
RN   [2]
RA   Lakani I., Suastika G., Damayanti T.A., Mattjik N.A.;
RT   "Detection and Identification several viruses infecting Orchid in Java
RT   Island, Indonesia";
RL   Unpublished.
XX
DR   MD5; c607aac0159b72f99423b2011e1aa82f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Dendrobium sp."
FT                   /isolate="Gunung Sindur"
FT                   /mol_type="genomic RNA"
FT                   /country="Indonesia"
FT                   /isolation_source="Gunung Sindur Bogor"
FT                   /collected_by="Irwan Lakani"
FT                   /collection_date="2009"
FT                   /identified_by="Irwan Lakani"
FT                   /clone="CymMV"
FT                   /PCR_primers="fwd_name: CymMV-CP F, fwd_seq:
FT                   cgggatccatgggagagtccactcca, rev_name: CymMV-CP R, rev_seq:
FT                   ggaattctcagtagggggtccaggc"
FT                   /note="Cymbidium mosaic virus Gunung Sindur Bogor isolates"
FT                   /db_xref="taxon:12178"
FT   CDS             1..>672
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H3K335"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:H3K335"
FT                   /protein_id="BAL61082.1"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEVK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPGPPT
FT                   GK"
XX
SQ   Sequence 672 BP; 128 A; 243 C; 164 G; 137 T; 0 other;
     atgggagagc ccactccaac tccagctgcc acctactccg ctgccgaccc cacttctgca        60
     ccaaagttgg ccgacctggc tgccattaag tactcgcctg tcacctcctc catcgccacc       120
     cccgaagaag tcaaggccat aacccaattg tgggttaaca accttggcct ccccgctgac       180
     accgtaggta ccgcggccat tgacctggcc cgcgcctacg ctgacgtcgg ggcgtccaag       240
     agtgctaccc tgctcggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc       300
     gcgcagatct tcgtggccaa tgtcaccccc cgccagtttt gcgcttacta cgcaaaagtg       360
     gtgtggaatc tgatgctggc cactaacgat ccgcccgcca actgggccaa ggctggtttc       420
     caggaggata cccggtttgc cgcctttgat ttcttcgatg ccgtcgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgcg aacgtgctgc gcactcgatc       540
     gggaagtacg gcgcccttgc ccgtcagcgt atccagaacg gcaaccttat caccaacatt       600
     gccgaggtca ccaagggcca tcttggctcc accaacactc tctatgctct gcctggaccc       660
     cctacaggaa aa                                                           672
//