ID AB693151; SV 1; linear; genomic RNA; STD; VRL; 7195 BP. XX AC AB693151; XX DT 30-SEP-2012 (Rel. 114, Created) DT 07-OCT-2012 (Rel. 114, Last updated, Version 2) XX DE Lunk virus NKS-1 RNA, segment L, complete sequence. XX KW . XX OS Lunk virus NKS-1 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-7195 RA Ishii A., Sawa H.; RT ; RL Submitted (18-JAN-2012) to the INSDC. RL Contact:Akihiro Ishii Research Center for Zoonosis Control, Hokkaido RL University; kita-ku, N20, W10, Sapporo, Hokkaido 0010020, Japan XX RN [2] RX DOI; 10.1099/vir.0.044099-0. RX PUBMED; 22815269. RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B.M., RA Takada A., Mweene A.S., Sawa H.; RT "Molecular surveillance and phylogenetic analysis of Old World arenaviruses RT in Zambia"; RL J. Gen. Virol. 93(Pt 10):2247-2251(2012). XX DR MD5; fc7efa20f843032590e7f4c2483db9f1. XX FH Key Location/Qualifiers FH FT source 1..7195 FT /organism="Lunk virus NKS-1" FT /segment="L" FT /host="Mus minutoides" FT /strain="NKS-1" FT /mol_type="genomic RNA" FT /country="Zambia:Lusaka" FT /isolation_source="kidney of rodent specimen: CZC 10LR34" FT /collection_date="10-Aug-2010" FT /db_xref="taxon:1134579" FT CDS 49..330 FT /codon_start=1 FT /transl_table=1 FT /gene="Z" FT /product="Z protein" FT /db_xref="GOA:K0IYA4" FT /db_xref="InterPro:IPR003224" FT /db_xref="InterPro:IPR038485" FT /db_xref="UniProtKB/TrEMBL:K0IYA4" FT /protein_id="BAM45330.1" FT /translation="MGQVKSRKDPKQGVSEVQRCDLIPNSADIGPAYCKSCWMKADGLT FT LCYDHYLCRECLNLLLSVSDRCPICKHTLPTKLRVAATPSAPPPPYSL" FT CDS complement(510..6755) FT /codon_start=1 FT /transl_table=1 FT /gene="L" FT /product="L protein" FT /db_xref="GOA:K0IW85" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR026382" FT /db_xref="UniProtKB/TrEMBL:K0IW85" FT /protein_id="BAM45331.1" FT /translation="MAGIILVPMVDGRCTYENSMMPDWVNHKFRDLLFRLLEFSNENER FT IFEESEYMRLCESLKTSVDRRSGIDSMKVLRDDRSSHNDEIIRMCHTEINPSMSSEEVA FT LGINQIYGEFRRDLLSGELKRNFRVSNPGQLISEFTHLYEGNLYKDDLKEICKLAVRSC FT PLMRFINSSLKGSDKHRCRVSYVDNLLSMLNKVKSLKLLNTRRKQLLNLDVLMLSALIK FT FEKTDPLRSKDSNYWLGCCHVSVNDRLVSHQSTKNDFLKVLRNRQKSGPFRGVPLSIIF FT DNTLSGFISKVKKCLQLAGLNFMNYNLTENLSDECAIKFSDFFEFTRDNPPPTMHYEKV FT DCYNYDSMVSLENAAFQKLSSISLAITNSMKTSSVVRLRQNESGAQRYKSVECKEVFYQ FT DVKTDSGDFYLLYQKTGEVSRCYSIHDHSSHIASFYADPKRFFLPIFSHDVILEMLDIM FT MSWLTPCSDLEGSIPSVHLALRTLVLLLLTNPSKRNQRQVQNLRYLTMALVSDFHHVEL FT MDKLREDLITDAEKLVHQLMVYLVREVFLVEKKTLLTTRFKFMLNVSYLCHLITKETPD FT RLTDQIKCFEKFFEPKKDFGFFVNPKEVITDEEKDLLYKQMVKFTSKDLKCQSKTPGIN FT KKAFSLMVSSINNGTLVCKGEKKLDLLDPMMNSGCATALDLASNKSVVVNKTLNGERLL FT EYDFNKLLVNSVSQITENFMRKGKLTLNAGDYEYKVSKAVSKLIISTSKGGGADKLETD FT DLKPDHIFDGQEELEFFHEVKDRVESIMLNYGVRKQTEYSDTHSKERKGLHHLQDVLPG FT EKAGLRKLILSEISYHLVEDFDPSCLSQDDLKYVCERTQTHNVLGKLYFTKEFKEQCTL FT DDMAPNLCRRFFEDGEWFSCFKMILLQMNANTYSGKYRFNHRQQLNFKFDRCKLEEDAR FT ISERESNSESLSKALSLSKCLSSALKNLCFYSEEAPTSYTSIGPDSGRLKFALSYKEQV FT GGNRELYIGDMRTKMFTRLIEDYFESLTGFFSGSCLNDEKEFENAILSMTINVRQGFLS FT YSMDHSKWGPMMCPFLFLMLLQNLKLSDEQYVRGGKDHISTLLAWHIHKMVEVPHNVVS FT AMMRSYIKDKLKLLKGSHCTPTERLFRNYFEKGVVPSHITSLIDMGQGILHNASDFYGL FT LSERFINYSISLLYGEAVDAYTSSDDQITLFDERISNLAEDDPEEVLILLEFHSHMSAL FT LNKFVSPKSVVSRFAAEFKSRFYVWGEEVPLLTKFVSAALHNVKCKEPHQLCETIDTIL FT DQAVANGVPVRLVNRIQSRTLSLLKYANCPIDPFMLNCQTDVKDWLDGSRGYRIQRLIE FT TLCPSQTKVMRKLVRRLHHKLKNGELSEEFLVDLFNRDKPQVIEHLGKVLDLTEDLTGL FT GDLCWLNLNEQFPMRMVLRQKVIYPSSMNFNEERLPSLVKTLQNKLSSKFTRGAQKLLA FT EAINKSAFQSCISSGFIGLCKTLGSRCIRNKEKETLYIKKVVSELEKDARVSAELSKVH FT DITLYKLNKGNTTVPCPAIDSTCFLRPILWDYICITLSNSFELGVWVIADPSPPPEDGF FT MSSQMNLNDYVGRKPTGVRLLEDRVTLNHILQSVRRLFPKIYEDQLLPFMSDQSSKMMK FT WSPRIKFLDLCVLIDIHSECLSLISHIVKYKRDEHYVVLTSDLARCHSREDTSLKDEFV FT VSSSDVCRNFLKQVFFESFVREFVITSRTIGNFSWFPHKSMTPSDDGIELLGPFQTFVS FT KVVNKGFERPMYRTDLQHGFGWFSYQFSDIICALAQLVQIGLTETHLFNGMTEFWNYVI FT ENTSGILQLNFSVNFTHNQSGGSCLRKFSISFQIKCQVTDVGQSRMLDCTYYFQGDVDR FT RLLDECLCLLRTDMMFKGNNVRLDLRSDEFQEYVKDPLSLGCIVELVITNSDAILKDVT FT SDDFQRVGPEWEPVPLSIKNGNLYEGCMLVQPLSLALGNKDFLIFLVETEGHPTQSVSL FT AALFKHRFKTGEHLMDVDIQLVLRDAQIAKHTLIDPLKEVTDWFRFRDTSLCYSKAKET FT IMYETSIGRFRLKGKSCDDWLVEAVQEEIE" XX SQ Sequence 7195 BP; 2023 A; 1701 C; 1333 G; 2138 T; 0 other; cgcaccgggg atcctaggct ttttggtttg cgctttgaac cagttgctat ggggcaggtg 60 aaatcacgga aagaccccaa gcagggagtg agtgaagttc agcgttgtga cctgattccc 120 aattccgcag acattggtcc tgcttattgc aagtcatgct ggatgaaggc agatggtctt 180 acactgtgtt atgaccatta cctctgcaga gaatgtctaa atctccttct ctctgtgtct 240 gaccgctgcc ctatctgcaa gcacactctg ccaacaaaac tcagagtggc agccaccccc 300 tccgctccgc caccaccata cagcctctga gaagacacac acaggcccga gcagagccac 360 gccccaagag gcacacaaac acacagacac acacaaacaa acgacacacc acacagacac 420 acacacacac acacaccccc agcagggggg ccccccacgg ggggcccccc cagggggcgt 480 gctccccgcc cgcccagcgc aggggtccgt cactctattt cctcctgcac tgcctccacc 540 agccagtcat cacaggactt tcccttcaat ctaaatctcc ctatagatgt ttcatacatt 600 attgtctctt tggccttgct gtagcataaa ctggtgtccc taaaacggaa ccagtcagtc 660 acctctttca gagggtctat gagggtgtgt tttgctattt gggcgtctct cagaactagc 720 tgaatgtcta catccataag atgttctcct gttttaaatc tatgtttaaa aagtgccgcc 780 agagacacag actgtgtggg gtgcccttca gtttctacaa ggaagatgag aaagtcttta 840 ttccccagtg caaggctcaa gggttgcacc agcatgcaac cctcatacaa gttcccgttt 900 ttgatggata gaggaacagg ctcccattca ggacccactc tttggaagtc atcagatgta 960 acatccttta ggattgcatc agaattagta ataacgagct ccacaataca ccccaaagac 1020 agaggatctt tcacatactc ctggaactca tcagacctta agtccaacct cacattgttc 1080 cctttgaaca tcatatctgt tctcagaaga cacaagcact catcaagcag tcttctgtcc 1140 acatctcctt ggaaatagta agtgcaatct aacattctag actgtcccac atctgttact 1200 tggcacttaa tttgaaacga tatagaaaac ttccttaagc aactccctcc actttgattg 1260 tgcgtgaagt tgactgaaaa attgagttga agaattccac ttgtgttttc tatgacatag 1320 ttccaaaact ctgtcatacc attgaataag tgtgtctctg tgagtcctat ctgtaccagt 1380 tgggcaagag cacagatgat atcactaaat tgataagaaa accacccaaa gccatgttgt 1440 aaatctgttc tgtacattgg tctctcaaaa cccttattca caactttgct gacaaacgtc 1500 tggaaaggtc ccagcaactc aattccatca tctgaggggg tcatactctt atgagggaac 1560 catgaaaaat tgccgattgt ccttgatgta attacaaact ctctcacaaa agactcaaaa 1620 aacacttgct ttaagaagtt cctgcaaaca tcactactac tcaccacaaa ttcatccttt 1680 aaggatgtgt cttctctaga atggcacctt gctaaatccg aggttagaac aacataatgt 1740 tcatccctct tgtatttgac aatatgtgaa attagagaaa gacattccga gtggatgtct 1800 attagcacac agaggtccaa aaactttatc cttgggctcc atttcatcat tttggaactt 1860 tgatcagaca taaatggcaa cagctggtct tcatagattt taggaaacaa tctccgaact 1920 gactgaagga tatggttgag tgttacccta tcttctaata acctaactcc tgtgggtttc 1980 ctaccaacat agtcatttaa gttcatctgg ctagacataa acccatcctc aggaggtggt 2040 gaggggtctg caatgaccca gacaccaagc tcaaaagaat tgctcagtgt gatacagata 2100 taatcccaca aaatgggtct caagaagcat gttgaatcaa ttgctgggca gggtactgtg 2160 gtgtttcctt tatttagttt gtatagtgtg atatcatgaa ccttgctcag ctccgctgac 2220 actctggcgt ctttttccaa ctcagaaaca accttcttta tgtacagtgt ttctttctct 2280 ttgtttctga tgcaacggct acctagagtc ttacagagtc caataaaccc tgatgatata 2340 caactttgga aagcagactt attgattgcc tctgccaata gcttctgagc acccctcgta 2400 aatttggaac tcagtttgtt ctgaagtgtc tttaccaacg atggtagcct ttcctcatta 2460 aagttcatgc tggatggata tatgactttt tgtctcaaca ccatcctcat tggaaactgt 2520 tcgttgagat tgagccagca gagatctccc aatcctgtca agtcttcagt gaggtccaat 2580 accttgccca ggtgctctat aacttgtggt ttatcacgat tgaataaatc caccagaaat 2640 tcttcactaa gctcaccatt ctttaatttg tgatggagtc ttctgaccag ctttctcatg 2700 acctttgttt gggaaggaca caatgtctca atcaaccttt gaattctgta tcccctggaa 2760 ccatctagcc aatccttaac atcagtctga caatttagca taaatggatc gattgggcag 2820 tttgcatact ttaacagtga caacgtgcgg ctttgtatgc gatttaccag ccttacaggt 2880 acaccgtttg ctacagcctg gtctagtatt gtgtctattg tctcacaaag ttggtgtggc 2940 tctttgcact tcacattgtg cagtgcagca gaaacaaact tggtcaacaa aggcacttcc 3000 tcaccccaaa cataaaacct agatttaaat tctgcagcaa aacgactcac cacactcttt 3060 ggactcacaa atttgttcaa taaagcactc atgtggctgt ggaattcgag cagaattaag 3120 acttcctctg ggtcatcttc tgccaaatta ctgattcgct catcaaaaag ggttatctgg 3180 tcatcactag atgtgtaggc atcaacagct tctccatata gaagggatat actgtagtta 3240 ataaatctct cactcagaag gccataaaag tctgaggcat tatgtaggat gccttgaccc 3300 atatcaatca aactggtgat gtgggaagga acaactccct tctcaaagta gtttctaaat 3360 aacctctcag ttggtgtaca atgagagcct ttcagtaatt tcagcttgtc ttttatgtat 3420 gatctcatca tggcactcac cacattatga ggaacttcca ccattttgtg aatatgccag 3480 gctaaaagcg tgctgatgtg gtccttcccc cctctcacat attgctcatc actcaacttt 3540 aaattctgca gtaacatcaa aaataggaaa ggacacatca ttggacccca cttgctgtga 3600 tccatactat agctaagaaa cccctgcctg acatttattg tcatgctcaa tattgcattt 3660 tcaaactctt tctcatcatt gaggcatgat ccggaaaaaa acccagttaa tgactcaaaa 3720 taatcctcaa taagccgtgt aaacattttg gttctcatat ctcctatgta aagttccctg 3780 ttacccccaa cctgttcttt ataagagagg gcaaatttca acctaccaga gtcagggcct 3840 attgaggtat atgatgtcgg tgcctcttca gaataaaaac ataagttctt taacgcagag 3900 ctaagacact tacttaatga caaagctttg cttaaggact cagagttgct ttctctctca 3960 ctgatccttg catcttcctc caatttgcat ctgtcgaatt taaaattcaa ttgttgccga 4020 tgattgaacc tgtatttccc tgagtaggtg ttggcattca tttgaaggag gatcatcttg 4080 aagcaagaaa accattcacc atcctcaaaa aaccttctac aaagattggg agccatatca 4140 tctagggtgc attgttcctt gaattccttt gtgaaataaa gcttacccag gacattatgg 4200 gtctgcgttc tttcacacac atacttcaaa tcatcttgtg ataagcatga agggtcaaaa 4260 tcttcaacca agtgatatga aatttctgag agtatgagct ttctcaaccc agccttctcc 4320 cctggcaaga catcctgtag atggtgtaat cccttccttt cctttgagtg agtgtcagag 4380 tactctgttt gttttctcac accgtaattc agcataattg actcaaccct gtctttgact 4440 tcatggaaga actcaagctc ttcctgccca tcaaaaatgt gatctggctt gaggtcatca 4500 gtctccagct tgtcagcacc tcccccttta gaagttgaga tgatcagctt tgagactgct 4560 tttgaaactt tatactcata atcacctgca tttaatgtca attttccttt cctcatgaag 4620 ttttctgtta tttggctaac tgagttaacg agtaacttgt taaagtcata ttccagtaag 4680 cgttcgccat taagagtttt gttgacaaca acacttttgt tgctcgccaa atctagtgcg 4740 gttgcacaac ctgagttcat catggggtct aaaagatcta actttttttc acctttacac 4800 accaatgtcc cgttgttgat ggaggagacc attaaactaa atgccttctt gtttattcct 4860 ggagtttttg actggcactt aagatcttta ctagtgaact taaccatttg cttatataac 4920 aggtctttct cctcatctgt gatgacctcc tttgggttca caaagaaccc aaagtctttc 4980 ttgggctcaa aaaacttctc aaaacattta atctgatctg tcaagcgatc gggggtctct 5040 tttgtgatta gatggcatag gtatgagaca ttcaacataa atttgaatct ggtagtcagc 5100 aatgtctttt tttcaacgag gaaaacttct ctgacaaggt agaccattaa ttggtgaacc 5160 aacttttctg catcagtgat cagatcctcc ctcaacttgt ccattagctc aacatggtgg 5220 aagtcagaca ctagggccat ggttaggtat ctaaggtttt ggacctgtct ttgattcctc 5280 tttgatgggt tggttaagag gaggagtaca agtgttctta gtgccaagtg aacacttggg 5340 atagatcctt ctaggtcaga gcagggggtt aaccatgaca tcatgatgtc taacatttct 5400 aaaatcacat catgtgaaaa gattggtaag aagaatctct ttggatcggc ataaaatgat 5460 gcaatgtggg aagagtgatc atgaatcgaa taacacctag agacttcccc agttttctgg 5520 tatagcaagt aaaaatcccc tgagtctgtc ttgacatcct gatagaagac ttccttgcac 5580 tcaacactct tgtatctttg ggcacctgat tcattctgtc taagcctcac aacagagctc 5640 gtcttcatgc tgtttgttat agccaaagat attgaggaca acttctggaa agcagcattc 5700 tccagtgaca ccattgagtc ataattatag cagtctacct tttcatagtg catagtgggg 5760 ggggggttat ctctagtaaa ctcaaagaag tctgagaact tgatggcaca ctcatctgac 5820 aagttctctg tgagattata gttcatgaaa tttaaacctg ccaattgcaa gcatttcttc 5880 accttgctga tgaatccaga cagagtattg tcaaagatga tacttaacgg gactccacgg 5940 aaaggcccag atttttgtct gtttctaaga accttgagaa aatcattttt tgtgctctga 6000 tggctaacaa gcctatcatt tacactaaca tggcaacacc ccagccagta attggagtct 6060 tttgacctca atgggtctgt cttctcaaat tttattaagg cagacaacat taagacatcc 6120 aggttgagta actgcttccg ccgtgtattc agaagcttca gacttttaac tttatttaac 6180 atggacaata agttatcaac ataggaaact ctacacctgt gtttatcaga tcctttcaga 6240 cttgagttaa taaatctcat taaagggcaa gatctaacag ccagtttgca tatttctttc 6300 aggtcatcct tataaagatt accttcataa aggtgagtga attctgatat caactggcca 6360 ggattgctaa ctctgaaatt ccttttcaat tcccctgaaa gcagatccct cctgaactca 6420 ccataaatct ggtttatgcc caaggcaacc tcctcacttg acattgatgg attgatctct 6480 gtatgacaca ttctgatgat ctcatcattg tgagatgacc tatcatccct gagcactttc 6540 atagagtcaa tacctgacct tctgtcaact gaggttttca aagactcaca tagcctcata 6600 tactcagact cttcaaagat cctctcattt tcatttgaaa actcaagaag cctgaacaat 6660 agatctctga acttgtggtt gacccaatca ggcatcatgg agttctcata tgtgcaccga 6720 ccatccacca ttggaaccaa gataatgcct gccattgcca aatcgtcttt gatgcttgaa 6780 agcttattag tgtcctctat gaattttgcc tcaaacccag ccggggaact cctcacaaag 6840 cattctaaca agattaaggt gttgtcaatc agtttataac catctggaat aatcaggggt 6900 aacccggggc agatgacacc agcctcaatc aagatggtct ccactgattt gtcttcatga 6960 ttgtgaacac agccattctt gtcagcactg tctatctcta tgcaccttga taacaacttc 7020 aacccttcta tcaaagtcag cttcggctct gactgactta agaagtttaa ttttgcctgg 7080 acagacgctc atcttgactc atgtaactta aacacagatg ccttatctct ccaataatgt 7140 cttccattcc agataccaaa aatgcgcatc aaaatagcct aggatcctcg gtgcg 7195 //