ID   AB669435; SV 1; linear; genomic RNA; STD; VRL; 1198 BP.
XX
AC   AB669435;
XX
DT   10-OCT-2011 (Rel. 110, Created)
DT   10-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Shallot yellow stripe virus gene for polyprotein, partial sequence,
DE   isolate: SYSV-SSan.
XX
KW   .
XX
OS   Shallot yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1198
RA   Chung B.N., Choi H., Yang E., Choi G.;
RT   ;
RL   Submitted (07-SEP-2011) to the INSDC.
RL   Contact:Bong Nam Chung National Institute of Horticultural & Herbal
RL   Science, Horticultural & Herbal Environment Div.; 540-41, top-dong,
RL   kwonsun-gu, Suwon 441-440, South Korea
XX
RN   [2]
RA   Chung B.N.;
RT   "Identification of Shallot yellow stripe virus in Shallots in Korea";
RL   Unpublished.
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DR   MD5; 3d368751a3c0149f51bc162b424aafec.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1198
FT                   /organism="Shallot yellow stripe virus"
FT                   /host="Allium cepa var. aggregatum"
FT                   /lab_host="Allium ascalonicum"
FT                   /isolate="SYSV-SSan"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /isolation_source="shallot leaf"
FT                   /collected_by="Bong Nam Chung"
FT                   /collection_date="01-Jul-2011"
FT                   /db_xref="taxon:62059"
FT   CDS             <1..1003
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G3XKR7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G3XKR7"
FT                   /protein_id="BAL03634.1"
FT                   /translation="YDELLHEIRLFYKWVLEQAPYNLIAQTGKAPYIAETALKKLYMDE
FT                   QATESELEKYIRLYQILDDRIPTPSYVSYQASETEDAANVTTDKQVGKSKDKDRDVDVG
FT                   TSGEFSVPKVKMLSDKMRLPRVGKKVILNGKHLLSYKPDQVDLYNTRATHAQFKTWYDA
FT                   VKLEYELTDEQMKIVMNGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIIDNAKPT
FT                   FRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAK
FT                   EAHMQMKAAAVRGVANRMFGLDGNISTDDENTERHTAADVNKDHHTLLGLRM"
FT   mat_peptide     <1..226
FT                   /gene="NIb"
FT                   /product="RNA dependent RNA polymerase"
FT   mat_peptide     227..1000
FT                   /product="coat protein"
XX
SQ   Sequence 1198 BP; 408 A; 222 C; 276 G; 292 T; 0 other;
     ttacgatgaa ttgctacacg aaatcaggtt attttacaag tgggtattag agcaagcccc        60
     atacaactta atagcccaga ctggaaaagc gccatacata gcagaaactg cacttaagaa       120
     attgtatatg gatgagcaag caaccgagag tgagttggaa aagtacattc gactctatca       180
     aatcttggat gatcgtatac caacaccgag ttatgtctca tatcaagcat cggagacaga       240
     agatgctgca aatgtaacta ctgataagca agttggaaag agcaaggaca aggacaggga       300
     tgtcgacgtt ggcacatcag gtgaattttc ggtcccaaag gttaaaatgt tgtcagataa       360
     aatgcgatta ccacgagtcg ggaagaaggt gatacttaat gggaaacacc ttctatctta       420
     taaacctgac caagtcgatc tatacaacac acgagcaaca cacgcacaat ttaagacgtg       480
     gtacgacgca gtaaagctcg agtacgaatt gacggacgaa caaatgaaaa ttgttatgaa       540
     tgggttgatg gtatggtgca ttgagaatgg aacatcacaa aacttgacgg gggtttggac       600
     aatgatggac ggagacaacc aaatggaata tccacttagt cctattattg ataacgccaa       660
     accaacattt agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata       720
     tagaaatgcc acagaaaaat acatgccccg gtatggactt cagcgaaact taagagaata       780
     cagcttagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc       840
     gaaggaagct catatgcaga tgaaagcggc agcggttaga ggggtagcta accgtatgtt       900
     cggcttggat ggtaacataa gcaccgatga tgagaacaca gaacgacata cagcagctga       960
     tgtgaataag gatcatcaca cactgctcgg tcttcgtatg tagtaaacat atatatattt      1020
     aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac atagtgtggt      1080
     cacaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccatga      1140
     gacttggtgt ggtcatacca cggaaagagt caagtgttgt acgttttgct agagagac        1198
//