ID AB649297; SV 1; linear; genomic RNA; STD; VRL; 6344 BP. XX AC AB649297; XX DT 26-OCT-2011 (Rel. 110, Created) DT 29-FEB-2012 (Rel. 111, Last updated, Version 3) XX DE Blueberry latent spherical virus genomic RNA, segment: 2, complete DE sequence. XX KW . XX OS Blueberry latent spherical virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-6344 RA Isogai M., Yoshikawa N.; RT ; RL Submitted (28-JUL-2011) to the INSDC. RL Contact:Masamichi Isogai Iwate University, Faculty of Agriculture; 3-18-8 RL Ueda, Morioka, Iwate 0208550, Japan XX RN [2] RC DOI:10.1007/s00705-011-1177-7 RX DOI; 10.1007/s00705-011-1177-7. RX PUBMED; 22109710. RA Isogai M., Tatuto N., Ujiie C., Watanabe M., Yoshikawa N.; RT "Identification and characterization of blueberry latent spherical virus, a RT new member of subgroup C in the genus Nepovirus"; RL Arch. Virol. 157(2):297-303(2012). XX DR MD5; 1ad760c73f16956164830000f24764ed. XX FH Key Location/Qualifiers FH FT source 1..6344 FT /organism="Blueberry latent spherical virus" FT /segment="2" FT /mol_type="genomic RNA" FT /country="Japan:Iwate, Takizawa-mura" FT /db_xref="taxon:1071488" FT CDS 56..4951 FT /codon_start=1 FT /transl_table=1 FT /gene="RNA2" FT /product="polyprotein" FT /db_xref="GOA:G5ELQ2" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G5ELQ2" FT /protein_id="BAL04701.1" FT /translation="MMTYDPDFAERMISAMKTDPKGFMAFVEKTKAAYAKGGLEATWAV FT VPPTVTEPLPKVQVPFVSRATVLRGIVERAIQLASTKICSSVLFQRRVGRAIWALAEGV FT VKYATLLGVRAALAMEEASQWVPICSSGSYSNVVSSNSPFCTSNWGVPPPSSKMAVVVS FT ATTQIPALQEQVEMIPPMGFVTFKSQGAETPKNDALKALQIPAHQEQVEMIPPMGFVTF FT KSQGAETPKNDALKALQIPAHQEQVAVAPPTELVVLKPQEVETSKSGTLKVSQIPVLQE FT QVVMAPPIELVVLKPQEVETSRIDAPKALDVVPPMAFGNSVSIQDETWGPEEAYLPFEI FT PISKANLCGPCIHVVGLPTTPLSGWSSFCGFENPPLPVTDKECFSLYSACIALAMQVEL FT SLDNCPAFDFCGWDEPSLSFIPTAPSLEAYASFSYSFTPDFQEYYKNFLFCGPFENPSF FT YEGPIGPLSFGATIMASHSLDHDCDLSFSSLSATAGILHSSIEVSAKLGSWPKRDFSHS FT PALLMKGESFCGFKSLPWPITTKDFDLLMGALDALHETPQQGTWPCGGTTSFNPSYTPR FT FKRGDENYSLPSNWKGKYSASNEALDRIYTRISEWGVRVNPKSGHFIACKGACCIPRCV FT SYEHGWICGQDVLYAHDCWICAIEALNATGKQDRKERKLFAALLEHTSIVGSAEIVKEP FT VPEKPSGGFLGCFYATKHEVAPKKNSLSTIATLFAAPALAFIHSEREEAETSAKLQDKA FT DEEHDKYWSSVESVKSKLKAKKGKKVPNSAEGMLGDKKTKLVERDVFAKVVHGSTMDRL FT KNRFISDGSMILTDQTFPLKDEEVRLGSTVGCPIYTRLPTFTEKELRKLTDKWEMSNTG FT VVALDMAIQSHVPEGTPMVAFATIMDGRTDDPHVAAQCGSYFDLGRGRCQALSLPLVNF FT NLNDLCKRLGNDDPELYLATYFNDLLGYRPGELVFTYGSSELLEHKPDAYTNKSLCKDT FT WDDILKRNVQKGNRIVKGFNVIDSISQDYEQEIPDFGDVNFNTKPRSIVAPTKAFTAKG FT VKEHSDPSTLRRSFSLARTQFGRVPTRNPTPFGGLAMGQAKHDPMPSNLDSKSMFEAPR FT HSTTCSGLESPYEIAISETYNVPKDAREGTHIGTIDFYTSIASQHKMPYQKWLGLGLID FT AEVMLNIYCGGNPFLGTTIGIVYDFYNKLDIATTLGGKLPRILGNCLPQTLHPMALGGF FT GSYKVNMSQYLGHSLFVSAKSFADPRFHLYIYDDNTTEASAEWRCTVEILVRRCSEERE FT NFNIPILTIPCSNFNSFINLDLFKGFGTIPLGKDPAIMPIGLDFAVAKEYATGKTCLGT FT TQAIFRCFLGVGGTLEGQLIRTSTIMVSCNVRILIWYGLSLPTLQETGSIPHEDLDFSR FT SDGTFRLKIQSPFARIANRTIDARLLVYPLGGPIATKGCNAPFSFAIYVKGIHFDEAVQ FT PLLFPDREYHWFQLDSFAKGALTIPLPNHICDFALDKQKVATVHLRSNPLSAIFGSCGF FT FKGNLTMIFRWTMERKISDGGSAIWIARCYGTTDSHEVLESQISNVYTPGEIRLELNTG FT DFSGANIPGGTTSPKQFPLIWIADGASVGNIQCSVLLHSGFAFYGRSCLAIK" FT mat_peptide 3392..4948 FT /product="coat protein" FT /note="CP" XX SQ Sequence 6344 BP; 1681 A; 1234 C; 1464 G; 1965 T; 0 other; ttgaaaatta ttttgaattt tctatttgtg gcctttattt tcttctaata tttccatgat 60 gacatacgat ccagattttg ctgagcggat gatatccgct atgaaaactg atcccaaagg 120 ctttatggcc tttgtggaaa aaactaaggc tgcctatgcc aagggcggtc ttgaggctac 180 atgggctgta gttccaccta cagtgactga acccctgcca aaggttcagg ttccttttgt 240 ctctagggct actgtcctaa gaggcatagt tgagagagcc attcagttgg cctcaactaa 300 gatctgctcc tctgttcttt tccagaggag agttggacgg gccatctggg ccttggctga 360 gggggtagtt aaatatgcta ccctcttggg tgtgcgagcg gcgctcgcaa tggaggaggc 420 atcccagtgg gtgcctatct gtagctctgg gagctacagt aatgtggtga gcagcaactc 480 acccttctgc acatccaact ggggtgtgcc tccgccatct agtaagatgg ctgttgtagt 540 ttctgctaca acacaaattc ctgctctgca agagcaggtg gaaatgatcc ctcctatggg 600 atttgtgact tttaagtcac agggagctga aactcccaag aatgatgccc ttaaggcatt 660 acaaattcct gctcaccaag agcaggtgga aatgatccct cctatgggat ttgtgacttt 720 taagtcacag ggagctgaaa ctcccaagaa tgatgccctt aaggcattgc aaattcctgc 780 tcaccaggag caggtggcag tggctcctcc tacggagctt gtggtgttga aaccacagga 840 ggttgaaacc tccaagagtg gtacccttaa ggtatctcaa attcctgttc ttcaagaaca 900 ggtggtaatg gctcctccta ttgagcttgt ggtactgaaa ccacaggagg ttgaaacctc 960 caggattgat gcccccaagg cattggatgt ggtgcctcct atggcatttg gaaacagtgt 1020 ttccatccag gatgaaacct ggggccctga agaggcttat cttccttttg agattcctat 1080 ctcaaaagcg aatctatgtg gaccatgtat ccatgtagtg gggttaccaa ccacccctct 1140 ctctggttgg tcttcttttt gtggatttga aaatccacca ctccctgtta ctgacaagga 1200 gtgtttttct ttatattctg cttgtattgc acttgcaatg caagtggagc tctctctgga 1260 caattgtcca gcttttgatt tttgtggttg ggatgaaccc tctctttctt tcattccaac 1320 tgctccttcc cttgaggctt atgcctcttt ttcttattct tttactcctg attttcagga 1380 gtattataaa aattttttat tttgtgggcc ttttgagaat ccttcttttt atgaaggacc 1440 tattggtcct ctttcttttg gggctactat tatggcctca cattctcttg atcacgattg 1500 tgatctttct ttttcctctt tgtcagcaac tgctggcatt ttgcattcat ctatagaggt 1560 gagtgcaaaa ttgggttcgt ggcccaagag agatttttct cattccccag ctctgttgat 1620 gaaaggggaa tctttttgtg gttttaaatc acttccttgg cctattacaa ccaaggactt 1680 tgatttgttg atgggagcat tagacgctct ccatgaaacc ccccaacaag gtacttggcc 1740 ttgtggggga accacatctt ttaacccttc ttacaccccg cgttttaaaa ggggtgatga 1800 gaattattct ttgccttcca attggaaggg taaatattct gcctctaatg aggcattaga 1860 tagaatttat actcgcatct cagaatgggg tgttagagtt aatcccaaat caggtcattt 1920 tattgcctgt aagggagcct gttgtatccc ccgttgtgtt agttatgaac atgggtggat 1980 ctgtggccaa gatgtccttt atgcacatga ttgttggatc tgtgctatag aggcgctcaa 2040 tgccacgggg aaacaggata gaaaggagcg caaacttttt gctgcgcttc ttgaacatac 2100 tagcatagtt ggttccgctg aaattgtaaa ggaaccagta ccagaaaaac ctagtggcgg 2160 atttctgggc tgtttttacg ccaccaaaca tgaagtagct cctaaaaaaa atagtttaag 2220 tactatagct actttatttg ctgcaccagc tcttgcgttt atacacagtg aacgtgagga 2280 agctgagact tctgccaaac tgcaagataa ggcagatgaa gaacacgaca agtattggtc 2340 tagtgttgaa tcagtgaaga gcaagctcaa agctaagaag ggaaagaaag ttcccaactc 2400 tgctgagggt atgcttggag ataaaaaaac caagcttgtc gaaagagatg tgttcgccaa 2460 ggtggtgcat ggatcaacca tggatcgcct taaaaatagg tttatatccg atgggtctat 2520 gatattgact gatcaaacct ttccattgaa agatgaggag gttcgattag gcagtactgt 2580 aggctgtcct atatacaccc gtctcccaac atttacagag aaagagttgc gaaaactcac 2640 agataaatgg gagatgtcga acacaggggt tgtagccttg gacatggcta ttcaatctca 2700 cgtcccagaa ggaactccta tggttgcttt tgcaaccatt atggatggaa gaacagatga 2760 tccacatgta gcagcacaat gtggatcata tttcgatctg gggagaggaa ggtgtcaagc 2820 cttgtccttg cctcttgtga atttcaattt aaatgatctt tgcaagagat tgggtaatga 2880 tgatcccgag ttatatctag caacttattt taatgatttg ctgggatatc gcccggggga 2940 gttagtcttt acctatggct cttcagagct tctggaacat aaaccagatg cttacactaa 3000 taagagtcta tgtaaggata catgggatga cattttaaaa agaaatgtcc aaaaaggaaa 3060 tcgcattgta aagggattca atgtgattga ttctatatcg caagattatg aacaagaaat 3120 cccagatttc ggtgatgtaa attttaacac aaaaccgaga tctattgtag cgcctactaa 3180 agcttttaca gctaaaggcg taaaagaaca tagtgatcct agcacattgc gaagatcatt 3240 ttctttagca cggacccaat ttggtcgtgt gcccactaga aatcccaccc catttggtgg 3300 gttggcaatg ggtcaggcaa agcatgatcc aatgccatct aacttagata gtaaatctat 3360 gtttgaggct ccgcgccata gcacaacgtg cagtggtttg gaatcaccct atgaaatagc 3420 aatttcggag acatataatg ttcccaaaga tgctagggag ggtacgcata ttggtactat 3480 agatttttat accagtatag cgtctcaaca taagatgccc taccagaaat ggttgggttt 3540 aggactaatt gacgcagaag ttatgctaaa tatatactgt ggcggcaatc cttttcttgg 3600 aaccaccata ggtatagtgt atgacttcta taataaatta gacatagcaa ctactttggg 3660 gggaaaattg ccgcgtattt taggtaattg tctcccacaa accctacacc ccatggcgtt 3720 aggagggttt ggcagctata aggtgaacat gtctcaatat ttggggcata gtctctttgt 3780 atctgcgaag agttttgcgg atcctcggtt tcatctgtat atatatgatg ataatacaac 3840 tgaggcgtct gcagaatggc gttgtacagt agaaatattg gtacgccgtt gcagtgagga 3900 gagggagaat tttaacattc caatcctcac tataccctgt agtaatttta attcttttat 3960 taatttagat ttatttaaag gttttggaac tattccacta gggaaagatc cagccatcat 4020 gcctatagga cttgattttg ctgtagcaaa agaatatgct acgggaaaaa cttgtcttgg 4080 caccacccag gcaattttta gatgttttct gggtgtgggt ggcaccttag aagggcagtt 4140 gattagaacc tctaccataa tggtatcctg taatgtgcgg atacttatat ggtatgggtt 4200 atctttacct acccttcaag agactggaag tataccacat gaagatcttg attttagtag 4260 atctgatggt actttcagat taaaaataca gagtcctttt gctcgcattg ccaataggac 4320 tatagatgca cggcttttgg tttatccctt agggggacca atagccacta aaggttgcaa 4380 tgcacctttc tcatttgcca tttatgtgaa aggtatacat tttgatgaag ctgtgcaacc 4440 attgttgttt ccagataggg aatatcactg gttccagcta gattcattcg caaagggtgc 4500 tcttactatt cctttgccaa atcatatctg tgattttgca ctggataagc agaaagttgc 4560 tacagttcat ttgagatcta accctctatc tgctatcttt ggatcatgtg gtttctttaa 4620 aggaaatctt accatgatct ttaggtggac gatggagaga aagatttcag atggtggtag 4680 cgccatctgg attgcccgat gctatggtac aacagatagc catgaggtgt tagagagtca 4740 aatctccaac gtatataccc ctggagaaat acgcctggaa ttgaatactg gcgatttctc 4800 tggggctaat atacctggag gtactacctc tcctaagcaa tttccattga tttggattgc 4860 tgatggggct tctgttggca acatacaatg ttcggtattg ttgcattcag gatttgcctt 4920 ttatggtaga tcttgtctag ccataaagtg aaatggctga acacgtgctg ttgcgtacaa 4980 cagatgtttc attgtccatt aggcaatggg gtgtggtggt cctaaaccac ttccaagagg 5040 gcgtcatcgc ttagcatttt acctaagggt tgaagatgtg aatattggag taatgcccca 5100 atagtcctct gcttttgcag taccaagaaa ttacttggtc ttggaggtct cagttccgat 5160 tctaactgag tgctttttga tatggttcaa gaaccaatcc cgactatggt atggttggac 5220 tgtattatat atgtagaact tgtatattgc tcattacatt taatgcgtga attcattaat 5280 agcgcttaaa ttgtggtgat atacagggta tgttttctac atatctaata tgaaatacca 5340 aataactaca gagatattga tctgatggga gtgcaattct cctgccaaac ttgaggccaa 5400 aagagttgat ttgctacctt ctaagaaagg agattgtctt ggtgaaattc caagctctat 5460 tttaattgct ttgtcttctt atttttttta gtcaatgaac attggtggtt tttgaaacca 5520 tccgtgagga ctatccacga agagatagct agaggtacaa ttaacactct cccctcaata 5580 aaaatgagag tgtggctggc gtccaggaat tcctggcaca gggacatgcg ttattccggt 5640 aggtaaaata cggaatcgtt tttcagctgg ttttgaccgt gatggaaaac cgcccctcat 5700 ctttcagagg gtatccgcgc attggttttc agtatatggg tactgaaatt gtgtagtatg 5760 ggctacaaca atgtgtggat taagtcttcc ttttagtagg aatgaagggt ccagagtgga 5820 gagtgaaacc ctgggaacca gcttatgttg ggaaggtttc gaataccgct cgtaagcccc 5880 taatttctga ggtctgggag aagaagcgct ttgccaagcg atattggctt aaggtttatg 5940 cgacgataat ttgttagtgt actcaagagt attcagggtg gcccctggta tttggatgag 6000 gtccggagat gaaaaccggg gggtaattaa ccccagctaa cggcataagc tgactttcat 6060 ggaagtgtcc atgacgcatt ttaagatagg ttttagacat acccttccgg gatggatgta 6120 attcccattt cgatatttgt gattagttat taatttccct gatgagggga cctaatgcta 6180 gtaagtgttg ctgcactgaa atctataagg ttatctgatg gtaaacgtat gtttcttttt 6240 gctttttgtg gcgataggct aggtttgtcc ttttcctggt cttgctaagt tggacacaaa 6300 aatatttttg ttttcaatag agtcgaagaa tgtcctttct tccc 6344 //