ID   AB643673; SV 1; linear; viral cRNA; STD; VRL; 1404 BP.
XX
AC   AB643673;
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DT   06-JUL-2011 (Rel. 109, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
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DE   Orthotospovirus tomatomaculae NSs gene for NSs non-structural protein,
DE   complete cds, isolate: TSWV-Njc.
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KW   .
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
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RN   [1]
RA   Chung B.N., Choi G.S.;
RT   "Tomato spotted wilt virus isolates giving different infection";
RL   Unpublished.
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RN   [2]
RP   1-1404
RA   Chung B.N., Choi G.S.;
RT   ;
RL   Submitted (02-JUL-2011) to the INSDC.
RL   Contact:Bong Nam Chung National Institute of Horticultural and Herbal
RL   Science, Horticultural and Herbal Environment Department; 540-41, top-dong,
RL   kwonsun-gu, Suwon 441-440, South Korea
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DR   MD5; ce0396ad4767e25d2a1feaddb372d331.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1404
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /host="Capsicum annuum"
FT                   /lab_host="Capsicum annuum"
FT                   /isolate="TSWV-Njc"
FT                   /mol_type="viral cRNA"
FT                   /country="South Korea:Gochang"
FT                   /collected_by="Bong Nam Chung"
FT                   /collection_date="2010-06-01"
FT                   /db_xref="taxon:3052585"
FT   CDS             1..1404
FT                   /codon_start=1
FT                   /gene="NSs"
FT                   /product="NSs non-structural protein"
FT                   /db_xref="InterPro:IPR004915"
FT                   /db_xref="UniProtKB/TrEMBL:F7J9X5"
FT                   /protein_id="BAK52046.1"
FT                   /translation="MSSSVYESIIQTKASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ
FT                   LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSININDSVLTLSVCSNT
FT                   VNTNGVKHQGHLKVLSPAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS
FT                   CVKEHTYKVEMCYNQALGKVNVLSPNRNVHEWLYCFKPNFNQVESNNRTVNSLAVKSLL
FT                   MSAENNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI
FT                   ACIPNHNSVETALNISVVCKHQLPIRKCQAPFELSMMFSDLKEPYNIVHDPSYPQRIVH
FT                   ALLETHTSFAQVLCNNLQEDVIIYTWNNYELIPGKLDLGERTLNYSEDICKRKYFLSKT
FT                   LECLPSNTQTISYLDSIQIPSWKIDFARGEIKISPQSVSVEKSLLKLDLSGIKKKESKI
FT                   SEAYASGSK"
FT   gene            1..1404
FT                   /gene="NSs"
XX
SQ   Sequence 1404 BP; 453 A; 281 C; 242 G; 428 T; 0 other;
     atgtcttcaa gtgtttatga gtcgatcatt cagacaaaag cttcagtctg gggatcaact        60
     gcatctggta aagctgttgt agattcttac tggattcatg aacttggtac tggttctcca       120
     ctagttcaaa cccagttgta ttctgattca agaagcaaaa gtagctttgg ctatactgca       180
     aaggtaggga atcttccctg tgaagaagaa gagattcttt ctcagcatgt gtatatccct       240
     atttttgatg atattgattt tagcatcaat atcaatgact ctgttctgac actatctgtt       300
     tgctcaaata cagtcaatac taacggagtg aaacatcaag gtcatttgaa agttttgtct       360
     cctgctcagc tccactctat tggatctacc atgaacagat ctgatattac agaccgattc       420
     cagctccaag aaaaagacat aattcccaat gacagataca ttgaagctgc aaacaagggc       480
     tctttgtctt gtgttaaaga gcatacctat aaggtcgaga tgtgctacaa tcaagctttg       540
     ggcaaagtga atgttctatc ccctaacaga aatgtccatg aatggctgta ctgtttcaag       600
     ccaaatttca atcaagttga aagcaacaac agaactgtaa attctcttgc agtgaaatct       660
     ctgctcatgt cagcagaaaa caacatcatg cctaactctc aggcttttgt aaaagcttcc       720
     actgattctc atttcaaact gagcctctgg ctaagagttc caaaggtttt aaagcagatt       780
     tccattcaga aattgttcaa agttgcagga gatgaaacaa acaaaacatt ttatttatct       840
     attgcttgca ttccaaacca taacagtgtt gagacagctt taaacatttc tgttgtttgc       900
     aagcatcagc tcccaatccg taaatgtcaa gctccttttg aattatcaat gatgttttct       960
     gatttaaagg agccttacaa cattgttcat gatccttcat atccccaaag gattgttcat      1020
     gctctgcttg aaactcacac atcttttgca caagttcttt gcaacaactt gcaagaagat      1080
     gtgatcatct acacttggaa caactatgag ctaattcctg gaaagttaga tctaggtgaa      1140
     agaaccttaa attacagtga agatatctgc aaaaggaaat atttcctgtc aaaaacactt      1200
     gaatgtcttc catctaacac acaaactatt tcttacttag acagcatcca aatcccttcc      1260
     tggaagatag actttgccag gggagaaatt aaaatttctc cacaatctgt ttcagttgaa      1320
     aaatctttgt taaagcttga tttaagcggg atcaaaaaga aagaatctaa gatctcagaa      1380
     gcatatgctt caggatcaaa ataa                                             1404
//