ID AB636411; SV 1; circular; genomic DNA; STD; VRL; 2774 BP. XX AC AB636411; XX DT 07-JUN-2011 (Rel. 109, Created) DT 07-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Tomato yellow leaf curl virus DNA, complete genome, strain: TYLCV-CJ-Ljs. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2774 RA Chung B.N., Choi H.S., Yang E.Y.; RT ; RL Submitted (02-JUN-2011) to the INSDC. RL Contact:Bong Nam Chung National Institute of Horticultural and Herbal RL Science, Horticultural and Herbal Environment Department; 540-41, top-dong, RL kwonsun-gu, Suwon 441-440, South Korea XX RN [2] RA Chung B.N., Choi H.S., Yang E.Y.; RT "Pathogenicity of the TYLCV Korean isolates"; RL Unpublished. XX DR MD5; d20d2acdf72a444f4e18f00da78d6711. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum esculentum" FT /strain="TYLCV-CJ-Ljs" FT /mol_type="genomic DNA" FT /country="South Korea:Cheju city" FT /collected_by="Bong Nam Chung" FT /collection_date="Feb-2011" FT /db_xref="taxon:10832" FT CDS 148..498 FT /codon_start=1 FT /transl_table=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:F7J5T7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:F7J5T7" FT /protein_id="BAK38565.1" FT /translation="MWDPLLNEFPESVHGFRCXLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT CDS 308..1084 FT /codon_start=1 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q6PMS6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6PMS6" FT /protein_id="BAK38566.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1081..1485) FT /codon_start=1 FT /transl_table=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:F7J5T9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F7J5T9" FT /protein_id="BAK38567.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNLRKVMGIHKCFLNFRIWTTLHPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRSVDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(1226..1633) FT /codon_start=1 FT /transl_table=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:F7J5U0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F7J5U0" FT /protein_id="BAK38568.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT PQEGHGDSQMFSQLPNLDDITSSDWSFLKSI" FT CDS complement(1542..2615) FT /codon_start=1 FT /transl_table=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:F7J5U1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F7J5U1" FT /protein_id="BAK38569.1" FT /translation="MPRLFNIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT KELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSALFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAGALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAESVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNQGPTSSYKEYLDEEKNISLKNWTLKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT CDS complement(2171..2464) FT /codon_start=1 FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F7J5U2" FT /protein_id="BAK38570.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHFSIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPEHSIQAVNPRPSIY" XX SQ Sequence 2774 BP; 752 A; 534 C; 612 G; 875 T; 1 other; accggatggc cgcgcctttt ctttttatgt ggtccccgcg agggttacac agacgtcacc 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gttttttgtc ttgcaatatg tgggacccac ttcttaatga gtttcctgaa 180 tctgttcacg gatttcgttg taygttagct attaaatatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgatttg attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtacag gcccatgtac cgaaagccca gaatatacag 480 aatgtatcga agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag tccagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 agggaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttagtc cgtgatagaa ggccctatgg aagcagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtgga ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttaaaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtac gagaaccata ctgaaaacgc cttgttactg tatatggcat gtacgcatgc 1020 ctcgaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgatctgat tacattgtta atggaaatta caccaagact 1200 atctaagtac ttaagaactt catatctaaa tactcttaag aaatgaccag tctgaggatg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccatga ccttcctgag 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcctga ggagcagtga tgagttcccc tgtgcgtgaa tccatgatta ttgcagttga 1500 ggtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agtccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccttat atgaggaggt aggtccttga ttgcatagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctttg ggcccccata 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattgctgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttccctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagacacg acgctctcgg cgacccactc ttcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgctccggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tgccatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaaagtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttcttt gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcctcttta gagagagaac aattgggata tgttaggaaa 2580 taatttttgg catatatatt aaataaacga ggcatgttga aatgaatcgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaatttca tgaatgttca ttgtaattca aaattcaaaa atcaaatcat taaagcggcc 2760 atccgtataa tatt 2774 //