ID AB620108; SV 1; linear; viral cRNA; STD; VRL; 6540 BP. XX AC AB620108; XX DT 25-MAR-2011 (Rel. 108, Created) DT 25-MAR-2011 (Rel. 108, Last updated, Version 1) XX DE Huitzilac virus gene for RNA-dependent RNA polymerase, complete cds, DE isolate: 200/2006. XX KW . XX OS Huitzilac virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus; OC unclassified Orthohantavirus; unclassified Hantavirus. XX RN [1] RP 1-6540 RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Ishizuka M., RA Yoshida H., Sanada T., Seto T., Yoshii K., Takashima I.; RT ; RL Submitted (17-MAR-2011) to the INSDC. RL Contact:Hiroaki Kariwa Hokkaido University, Graduate School of Veterinary RL Medicine; Kita-18, Nishi-9, Kita-Ku, Sapporo, Hokkaido 060-0818, Japan XX RN [2] RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Yoshida H., RA Almazan-Catalan A., Miyashita D., Ishizuka M., Seto T., Sanada T., RA Ramos C., Yoshimatsu K., Arikawa J., Yoshii K., Takashima I.; RT "Genetic identification and characterization of distinct hantaviruses RT circulating in Mexico"; RL Unpublished. XX DR MD5; 0cb34a4f30a78cd636b77685bae82a72. DR EuropePMC; PMC3557881; 23171649. XX FH Key Location/Qualifiers FH FT source 1..6540 FT /organism="Huitzilac virus" FT /segment="L" FT /host="Reithrodontomys megalotis" FT /isolate="200/2006" FT /mol_type="viral cRNA" FT /country="Mexico:Morelos" FT /lat_lon="19.03 N 99.14 W" FT /isolation_source="Lung of Reithrodontomys megalotis" FT /collection_date="19-May-2006" FT /db_xref="taxon:1000587" FT CDS 36..6497 FT /codon_start=1 FT /transl_table=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:F1T2D0" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:F1T2D0" FT /protein_id="BAK08527.1" FT /translation="MEKYREIHQRIKEIPPGTASALECMDLLDRLYAVRHDVVDQMIKH FT DWSDNKDVERPIGQVLLMAGVPNDVIQGMEKKIIPSSQSGQILKSFFRMTPDNYKITGN FT TIEFIEVTVTADVAKGIREKRLKYEGGLAFIEELLSQEHKRGNIPQPYKITLGVVAVKT FT DGSNISTQWPSRRNEGVVQHMRLIQADINYVREHMIKPDERSSLEAMFNLKFHVSGPKL FT RYFNIPDYRPQSLCHPEPQSLINYCKHWLTEDHNFNFKEVSGTNVMECFEENERLHMSS FT YTESRKPRNFLLIQGTVQGPYLPSTITSDQCDTRIGCLEILKSVPQTPVQAIALDMAYK FT YMSLTKDEIINYYNPRVHFQTTQNVKEPGTFKMGLSQLNPLSRAVLDQVGKHKSEKGMF FT GGLIESINIGSQIQLNECCRVIEQILSNLEINLGETTSTIPQPRKTTGVDSLLGKFYEN FT ELIKYLLVILRKTAAWHIGHMLRDITESLIAHAGIKRSKYWSIHAYDHGGLILFILPSK FT SLEVVGSYIRFFTVFKDGIGLIDSDNLDSKVDIDDVTWCFSKVMSIDLNRLLALNIAFE FT KALLATATWFQYYTEDQGHFPLQHALRSVFAFHFLLCVSQKMKLCAIFDNLRYLIPSVT FT SLYSGYTLLIEKFFERPFKSAFDVYLYSIIRALLISLAQSNKVRFYSKVRLLGLTVDHS FT TVGASGVYPSLMSRVVYKHYKSLISEATTCFFLFEKGLHGNLNEEAKIHLETVEWARKF FT QKKEEQYGDILMREGYNIDAIKNGSVKVEQQIFCQEVVELAAQELNKYLQAKSQVLCSN FT IMNKHWDRPYFSQTRNISLKGMSGSLQEDGHLAASVTLIEAIRFLNRSQTNPNVIEMYE FT QTKQHKAQARIVRKYQRTEADRGFFITTLPTRVRLEIIEDYFDAVAKVVPEEYISYGGD FT RKVLNIQLALEKALRWASGHSEITTSTGNIIRFKRKLMYVSADATKWSPGDNSAKFKRF FT TQALHDGLSDHKLKCCVVDALRHIYETEFFMSRKLHRYIDNMETHSDAVKDFLEFFNGG FT VSATIKGNWLQGNLNKCSSLFGAALSLLFKQVWNELFPELECFFEFAHHSDDALFIYGY FT IEPDDDGTEWFMYVSQQIQAGHYHWYAVNQDMWKSMFNLHEHILLMGSIKISPKKTTVS FT PTNAEFLSTFFEGCAVSIPFIKILLGSLSDLPGLGFFDDLAAAQSRCVKALDLGASPQL FT AQLAIVICTSKVERLYGTAEGMVNNPSAFLKVTKQAIPIPLGGDGSMSIMELATAGIGM FT ADKNILKNAYYSFKHTRRESDKYILGLFKFLMSLSEDIFQHDRLGEFSFVGKVQWKVFT FT PKSEFEFHDQFSHTYLKAWTQQHPVYDYIIPRSRDNLLVYLVRKLNDPSIVTAMTMQSP FT LQLRFRMQAKQHMKVCRLEGEWVTFREVLAAADSFATQYSPTENDLDLFQTLVNCTFSK FT EYAWKDFLNEVKCEVTTARHIHRAKVARTFTVREKDQAIQNPITAVIGYKYATTVDEIS FT DVLDSSIFPDSLSADLQVMKDGVYRELGLDIGLPDVLKRIAPLLYKAGRSRVVIVEGNV FT EGTAESICSYWLRSLSLVKTIKVKPRKEVLKAVSLFNRKENIGLQDDLAATRLCIEVWR FT WCKANDQDVNDWLCALYFENQTLMDWVERFRRKGVISVDPEIQCMALLLYDVLGYKGVL FT QMQANRRAYSGKQYDAYCVQTYNEETKLYEGDLRVTFNFGLDCARLEIFWDKREYILET FT SITQRHVLKLMMEEVTKELLRCGMRFKTEQVNSARSPVLFKTEAGFEWGKPNVPCIIFK FT HCALRTGLRTKQPINKEFIINIQAEGFRAIAQMDIESPRFLLAHAYHTLRDVRYQALQA FT VGNVWFKTPQHKLFINPIISSGLIENFMKGIPAAIPPAAYSLIMNKAKISVDLFMFNEL FT LALINNHNILNLDGIEETSEGYSTVTSMSSRQWSEEMSLVADDDIDDPDEYTIDLDDVD FT FEQVNLDEDIEHFLQDESAYVGDLLIQTEDTEIKKIRGVTKILEPVKLIKSWVSKGLAI FT NKVYNPVGIVLMARHMSKTYNFHKIPLALLNPYDLTEFESVVKGWGETVNDRFQEYDTE FT AQKLVTEKHILPEDILPDSLFSYRHVDVLLKRLFPIDPISSFY" XX SQ Sequence 6540 BP; 2123 A; 1041 C; 1423 G; 1953 T; 0 other; tagtagtaga ctccgagata gagaagtcta ctacaatgga aaaatacaga gagatacacc 60 agagaattaa ggaaataccc ccagggactg catcagcatt agagtgtatg gacctgctgg 120 acaggttgta tgcagtaagg catgatgtag tggaccagat gataaagcat gattggtctg 180 acaataaaga tgtagaaaga ccgataggtc aggtattgct aatggcaggt gtgccgaatg 240 acgttattca ggggatggaa aagaaaatta ttcctagcag ccagagtgga caaatactga 300 agagtttttt tagaatgacc ccagataatt ataagataac aggcaacact attgagttca 360 tagaggtaac agtaacagca gatgttgcta aagggatcag agagaagagg ctgaagtatg 420 aggggggttt agccttcatt gaggagttat tatctcaaga gcataaaaga ggtaatattc 480 ctcagccata taagatcact ttaggtgtgg ttgcagtcaa aactgacgga tccaatatat 540 caacgcaatg gccaagcagg cgtaatgagg gtgtggtaca acatatgaga ctcatccaag 600 ctgatattaa ttacgtgcgt gagcacatga taaagcctga tgagaggtca tcattggagg 660 caatgtttaa tttgaaattc catgttagtg ggccaaagct ccgatatttt aacataccag 720 actataggcc ccaatcctta tgtcatcctg aacctcaatc cttgattaac tattgtaaac 780 attggttgac agaggatcat aactttaatt ttaaagaggt tagtggaact aatgttatgg 840 aatgctttga agaaaatgaa aggcttcaca tgtcatcgta tacagagtct cgaaagccta 900 ggaacttctt gctgatacag ggtactgttc aagggcctta cttaccttct acaataacgt 960 cagaccagtg tgatactaga ataggctgtt tggaaatttt aaagagtgtg cctcaaacac 1020 ctgtacaagc catagcacta gatatggctt acaagtatat gagccttaca aaggatgaga 1080 ttataaatta ttataatccg agagtccact ttcagacaac acagaatgtg aaagaaccag 1140 ggacttttaa aatgggtctg tcacaattga acccattatc tagagcagta ttggatcaag 1200 ttggtaagca caaatcagag aaaggtatgt ttggaggttt gattgagagt ataaatatcg 1260 gaagtcaaat acagttaaat gagtgttgta gagtgattga acaaatatta tctaaccttg 1320 aaattaacct aggagagaca acaagtacca tcccacaacc taggaaaaca acaggagttg 1380 attcactttt aggaaagttt tatgagaatg aattaatcaa gtacttgttg gtaatattaa 1440 gaaaaactgc agcatggcat ataggacata tgcttagaga tataacagag agtctcattg 1500 cacatgcagg gattaagcgt tctaagtatt ggtcaataca tgcctatgat catggagggt 1560 taattttatt tatcctacct tccaagtcac ttgaagttgt gggttcttat attaggtttt 1620 ttacagtatt taaggatggt attggcctta ttgactctga taacctagat tctaaagtgg 1680 atatagatga tgtgacatgg tgtttttcta aagttatgag tatagatcta aatagattac 1740 ttgctttgaa cattgctttt gagaaggcac tgttagcaac tgctacttgg tttcagtatt 1800 atacagaaga ccagggacac tttccacttc agcatgcatt gagatctgtc tttgcctttc 1860 atttcctgtt gtgtgtatcc caaaagatga agctctgtgc tatatttgat aacctacgtt 1920 atctcattcc atcagtcaca tctctatatt caggctatac gctgttgatc gaaaagttct 1980 ttgagcgccc ctttaagagt gcatttgatg tctatttgta tagtattatt agggctttat 2040 taataagcct agcacagagt aataaagtta ggttttactc taaagtgagg cttcttggtt 2100 taactgtaga ccattctact gttggtgcca gtggggtgta tccttcttta atgtcacgtg 2160 tagtttacaa gcattataaa agtttaatct cggaggcaac tacatgtttt ttcttgtttg 2220 aaaagggact tcatggtaat ttaaatgaag aagcaaaaat tcatctagaa actgtagagt 2280 gggctaggaa atttcaaaag aaagaagagc aatatggaga tattttaatg agagagggtt 2340 ataacattga tgcaattaaa aatgggagcg tcaaagtaga acaacagatt ttttgtcagg 2400 aggttgtaga actagctgca caggaactta acaaatattt gcaggcaaag tcacaggttt 2460 tatgttctaa tatcatgaat aaacattggg ataggcctta ttttagtcaa acaaggaata 2520 taagtttgaa gggtatgtca ggttcattac aagaggatgg ccatcttgca gcaagtgtta 2580 cactgataga ggcaattcgt ttcttaaaca gatcacaaac gaatccaaat gttattgaaa 2640 tgtatgagca gactaagcaa cataaagctc aagcacggat tgtgcggaaa tatcaaagga 2700 ctgaagcaga tcgcgggttt tttattacta ctttacccac tcgtgtgagg ttagaaatca 2760 tagaagacta ttttgatgca gtagcaaaag ttgtcccaga agaatacata tcatatggtg 2820 gtgataggaa agttctaaat attcagctgg ctctggagaa ggctttacgg tgggcatccg 2880 gacattcaga aattaccaca agtacaggga acatcatacg ttttaaacgg aaattgatgt 2940 atgtcagtgc tgatgcaaca aaatggtctc caggtgacaa ttcagcaaaa tttaaaaggt 3000 tcacacaggc attacacgat ggattgtctg atcacaaact taaatgctgt gttgtggatg 3060 ctctccggca tatttatgaa acagaatttt tcatgtctcg caagctacac agatatatag 3120 acaatatgga gactcattca gatgctgtaa aggattttct tgagttcttt aatgggggag 3180 tttctgctac tattaaaggt aactggcttc agggaaattt gaacaaatgt tcatcattat 3240 ttggggctgc attatccctt cttttcaagc aggtttggaa tgagttgttt cctgaactag 3300 agtgtttctt tgagtttgct caccattcgg atgatgcatt gttcatatat gggtatatag 3360 aaccagatga tgatggtact gaatggttta tgtatgtttc gcagcaaatt caggctggtc 3420 attatcattg gtatgcagta aaccaagaca tgtggaaaag tatgtttaac ttacatgagc 3480 atatactcct tatgggttca attaaaatct cacctaaaaa gacaacggtt tcacctacaa 3540 atgcagaatt tttatctaca ttttttgaag ggtgtgcagt atcgattccc tttataaaaa 3600 tattgcttgg atcattatca gacttaccag gtctgggctt ttttgatgat cttgcagctg 3660 cccagagcag atgtgtgaaa gctttagatt taggtgcaag tccacagctt gcacagctgg 3720 caattgtaat ttgcacaagt aaggttgaga gactgtatgg aacagctgaa ggcatggtta 3780 acaaccctag tgccttctta aaagtcacta aacaagctat tcctattcca ctggggggtg 3840 atggctcaat gtcaattatg gaacttgcta cagctggtat cggcatggct gacaaaaata 3900 tattaaaaaa tgcctattac tcattcaaac atacacgaag agaatcagac aaatatatat 3960 tagggctatt taaatttttg atgtcattga gtgaggatat ctttcagcat gataggttgg 4020 gggagttcag ctttgtgggt aaggtacaat ggaaagtatt cactcctaag tcagagtttg 4080 aattccatga tcaattttca catacctatc ttaaggcttg gacacagcag cacccagtgt 4140 atgactatat aattccaagg agccgtgata atttgcttgt ataccttgtt agaaagctga 4200 acgacccaag tatagttact gcaatgacca tgcaatctcc tcttcaattg aggtttcgaa 4260 tgcaggctaa acagcatatg aaagtatgca gacttgaagg ggaatgggta acatttagag 4320 aagttcttgc agctgcagat agctttgcaa cacaatatag cccgactgag aatgacttag 4380 atctattcca gacattagta aactgtacat tttcaaagga atatgcctgg aaagattttt 4440 taaatgaagt aaagtgtgaa gtcactactg ctagacatat tcatcgtgca aaagtagcaa 4500 ggacatttac tgtgagagaa aaagatcaag ccatccaaaa tcctatcact gcagtgattg 4560 gttacaagta tgcaacaact gttgatgaaa taagtgatgt ccttgatagc tctatattcc 4620 ctgactcatt atcagctgac cttcaagtta tgaaagatgg ggtttatcgt gagttaggac 4680 ttgatatagg attacctgat gttttgaaga ggattgcccc tttattatat aaagcaggta 4740 ggtcaagggt tgttattgtg gaaggtaatg tagaaggtac agcagaatct atttgcagtt 4800 actggcttag gagcctctct ttagttaaga caataaaagt caagcctcgg aaagaagttt 4860 taaaggctgt atcattattc aatagaaaag aaaacatcgg acttcaggat gacttggctg 4920 ctacgaggct atgtattgag gtatggcgtt ggtgtaaggc caatgatcaa gatgtaaacg 4980 attggctttg tgctttatac tttgaaaatc agacactcat ggattgggtg gaaagattta 5040 ggagaaaggg ggtcatatca gtagaccctg agattcaatg catggcttta ttactttatg 5100 atgttttagg ttataagggt gtattacaaa tgcaagcaaa tcgaagggct tattcaggga 5160 agcagtatga tgcatattgt gtccagacat acaatgagga aacaaaactg tatgagggtg 5220 atctgagagt tacatttaat tttggtctag actgtgctag attagagata ttttgggata 5280 aaagagagta tattttagag acctctatta ctcaaagaca tgtccttaag cttatgatgg 5340 aagaagttac caaagagttg cttagatgtg gtatgcggtt taagacagaa caagttaata 5400 gtgcacggag tcctgttctt tttaagacag aagctggctt tgaatggggt aaaccgaatg 5460 ttccatgtat tatatttaag cattgtgctt tacggacagg acttagaaca aaacaaccta 5520 ttaacaagga atttattatt aacatacaag ctgaaggctt tcgtgcaata gcacaaatgg 5580 acattgaaag tccaaggttt ttattagcac atgcatacca cacattgaga gatgttagat 5640 atcaagcctt acaagcagtt ggtaatgtat ggttcaagac accgcaacat aagttgttta 5700 taaatccaat aatctcttca ggcttgattg aaaactttat gaaaggaata ccggcagcaa 5760 ttccccctgc tgcatattca ttaattatga ataaggctaa aatctcagtt gacctcttta 5820 tgtttaatga gctgttagcc ctaattaaca atcacaatat attaaactta gatggcattg 5880 aagaaacatc tgaagggtat agtacagtca catctatgtc aagtcgtcaa tggtcagaag 5940 agatgagcct tgttgcagat gatgatattg atgatcccga tgagtataca attgatcttg 6000 atgatgtgga ctttgaacaa gtgaatctgg atgaagacat tgagcatttt ttacaagatg 6060 aatcagcata tgtgggtgac ctcttgatcc aaactgagga cacagaaata aagaaaatca 6120 gaggtgtaac caagatatta gaacctgtga agttgattaa gagttgggtt tcaaaagggt 6180 tagccattaa taaagtatac aaccctgtag gaattgttct gatggcaaga catatgtcaa 6240 aaacgtataa cttccataaa attccgctgg cacttttaaa tccatatgat ctaacagaat 6300 ttgaaagtgt tgtaaagggc tggggggaga cagtgaatga taggtttcag gagtatgata 6360 cagaagcaca gaaattagta actgaaaaac acatactccc agaggatata ctgccagact 6420 ctttgttttc ctaccggcat gtagatgtgc tcctaaaacg cctctttcct atagacccta 6480 tatcctcttt ctattagttg atttttcact tcatatagta cagaatgttc tttctaatga 6540 //