ID AB620063; SV 1; linear; genomic RNA; STD; VRL; 4099 BP. XX AC AB620063; XX DT 24-JAN-2012 (Rel. 111, Created) DT 21-JUN-2012 (Rel. 113, Last updated, Version 3) XX DE Rosellinia necatrix quadrivirus 1 RdRp gene for RNA dependent RNA DE polymerase, complete cds, segment 3. XX KW . XX OS Rosellinia necatrix quadrivirus 1 OC Viruses; Riboviria; Quadriviridae; Quadrivirus. XX RN [1] RP 1-4099 RA Lin Y., Chiba S., Kondo H., Suzuki N.; RT ; RL Submitted (16-MAR-2011) to the INSDC. RL Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and RL Resources; Chuo 2-20-1, Kurashiki, Okayama 710-0046, Japan XX RN [2] RX DOI; 10.1016/j.virol.2012.01.013. RX PUBMED; 22321722. RA Lin Y.-H., Chiba S., Tani A., Kondo H., Sasaki A., Kanematsu S., Suzuki N.; RT "A novel quadripartite dsRNA virus isolated from a phytopathogenic RT filamentous fungus, Rosellinia necatrix"; RL Virology 426(1):42-50(2012). XX DR MD5; 6d7143d0cd6d69e1d021b949c39e4d93. DR EuropePMC; PMC6356713; 30585188. XX FH Key Location/Qualifiers FH FT source 1..4099 FT /organism="Rosellinia necatrix quadrivirus 1" FT /segment="3" FT /host="Rosellinia necatrix" FT /isolate="W1075" FT /mol_type="genomic RNA" FT /country="Japan:Saga" FT /collected_by="Naoyuki Matsumoto" FT /collection_date="1997" FT /note="This virus has alternative 5- and 3-terminal FT nucleotides C or U, and G or A, for the plus-strand RNA FT sequence respectively." FT /db_xref="taxon:1000373" FT CDS 26..3958 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:H1ACC7" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:H1ACC7" FT /protein_id="BAL46425.1" FT /translation="MDSTDNIEHDTYREDIRYERSRMGYRAKARTLITNGKEYRLRQSA FT WRMLSKQGTRDLLLQGRKCADELGTGDGHIYSQVSQEMATMLREIGYSGGRADVPITVY FT RPRERSAARVETKAVLEAVLDYVQRADSQKVELDVAAMSEHELCSQISYLRPSTVVGLG FT MTWAPTRTEGHWMEDALINACTEAFKEAENVVSDDLVQANLIVEALLTKMIRSNIVFDA FT DYGKDARRVEPHERSSGLDLTAAAKLCQGNTVVQELFRFCEQIYYDAFDKWLAGSKTAR FT GRALRQANPILVDRSVSDTSCNDWLLARMEDVWFDWNVTGWISAAMIAIYINSDPTTRQ FT LSGHEQRLVAKSFYKGSTWRKLVDISATMDATPDRESGEVTAAALRMVRLRAPLNAITA FT LCDDLEYAYRSGTVLEDHERALLAAKFGKITAAELYYEAPAELKSSTDSIKQPPYVRII FT EEDGEYTYQECALADANAVLLGWEHTADKPASKTTAVLTGEEYAVFSFSDQSLRASYIR FT YDTCENKLHNVVAAHAGGSLYRENSFGCSAPIVEFLDQFGQQYEALMTPAERVNLLMAL FT STPTITQQHHQHLSLTNVLNSIGAWDCVLDHVLAWPDINYTMFTTVALALSGLPAQARY FT LMNTWRGWSCESAQAYHKVAKNFSTTCKSLDNKVTLLGEPLDLAVFFEWETVLNRGFGK FT MSWSDEIRDRRDLTQNVDLGVPEAEQHIRDIMLEIKSKMKKRGGKLLLNRTWEQFYSAR FT SRETPAGSASSLDPYILECKQKVKDATKADITKTQVLSFMADGYTIDQLLSKKPQVLAT FT VSIKYEWGKMRALFAAVVEHYLLAAFAFTGVEDFMPNDCPVGKGADASAVCSKVMAMAK FT SSVYVCVDAANFNILHTFALMSAVIRIYGEVFHDWLSPEQQETVRWLMEAELDQRVVLN FT KSQLDAELYEEGMRDGWITQHGDKLIVQVLGGLFSGHRLTMFINTVLNRVYYRVAAARA FT HTEPDALHSGDDVFACYQSIGEALRVKAGFKSFGYTLQLTKCFLLGVAEFLRISHKNNN FT TSQYYARSCATSVHGRIETGEANDMQALATANITRACEAMLRYGERRVFMQVVAMQNAG FT VCARWSVPTYVYAAYIITPTLLGGMRCGHSEESLLSNFAIERIANVNSPAVAFFQQTPG FT VKQAARDIVQALGLTEHYNRAGRAIAAGIATRSVLSAFSMSLRWMGDQVHVAMKRWAGK FT YAHIRQSRDYILSKSVGLFNLLWEEGHFGEQFDRVTQVHSSWLGKILEVALMPAQVIKN FT GLADTLMDKVGMLSEVRRIQAGMREW" XX SQ Sequence 4099 BP; 1150 A; 950 C; 1162 G; 837 T; 0 other; cacgaataca cccacaacag accacatgga ttccacagac aacatagagc acgacacata 60 cagagaggac atccggtacg agcggtctag gatggggtat cgggcaaagg caagaacgtt 120 aatcactaat gggaaagaat acaggctgag gcagtctgca tggcgcatgt tgagcaagca 180 gggaacgaga gatttactgc tgcaagggcg taagtgtgca gatgaactgg gcactggcga 240 cggacacatc tattctcaag tgagtcaaga gatggctaca atgctgaggg agattggcta 300 ttcaggaggc agagccgacg tccccatcac cgtgtacaga ccacgagagc ggtctgcagc 360 tcgagtggaa actaaagcgg tactggaagc agtattggac tacgtgcaga gggcagatag 420 tcagaaggtt gagctagacg tagcggcaat gagcgagcac gaactatgct cgcagatttc 480 ttacttaaga ccgagtactg tggtgggcct gggcatgact tgggcaccaa cacgcacaga 540 gggccactgg atggaggacg ctctgatcaa cgcctgcact gaagcgttca aggaggccga 600 gaacgtcgta agtgacgatt tggtgcaagc gaatttgata gtggaggctc tgctgacgaa 660 aatgatccgg tccaatatcg tgtttgacgc ggactacggc aaagacgctc gtagagttga 720 accacatgag cgcagttctg ggctggactt gacagccgct gccaagttgt gtcaaggcaa 780 cacggtcgtc caggaactgt tccgtttctg tgagcagatc tactacgacg ccttcgacaa 840 gtggttagct ggcagcaaaa cggcaagggg tcgcgcactg cgacaggcaa acccgatctt 900 ggttgacagg tcagtttctg acacgtcatg caatgactgg ctgttggcac gcatggagga 960 cgtttggttt gactggaatg tcaccggctg gataagtgcg gcaatgattg ccatatacat 1020 aaactcagac ccaacaacaa ggcagctgag cggacatgag cagagactag tggctaagtc 1080 attctataaa ggttcgacgt ggcgtaagct agttgacatc agtgccacta tggatgcaac 1140 gccagaccga gagtcaggtg aagtgaccgc cgcggctttg cgtatggtta gactacgtgc 1200 gcctttgaat gccatcactg ctctgtgtga tgacttagag tacgcatatc gttcagggac 1260 cgtactggaa gaccacgaac gagcactctt ggcagcaaag tttggcaaaa tcacagctgc 1320 cgagctgtat tacgaagcac cggctgagtt gaagtccagc acggactcca tcaagcagcc 1380 accatatgtg cgaatcattg aggaagacgg agaatacact taccaagagt gcgcactcgc 1440 tgacgcgaac gctgtgcttc taggttggga acatacagct gataagccag ctagtaagac 1500 caccgcggtg ctcactggag aggagtatgc agtgttctca ttctctgacc aaagtctcag 1560 agcatcatac atcaggtacg atacatgcga gaacaagcta cacaacgtgg tggcagcgca 1620 cgcggggggg tccctatacc gtgagaacag ctttggctgc tcagcaccaa tagtggagtt 1680 cctggaccaa tttggccaac agtatgaagc actgatgacc ccagcagagc gagtgaactt 1740 gctaatggcg ctatcgacac cgacgataac gcagcagcac caccaacacc tgagcctgac 1800 gaatgtccta aactcaatcg gggcttggga ctgcgtgctg gaccacgtgc tagcatggcc 1860 agacatcaac tacaccatgt tcactacagt ggctctggcg ctgtcgggac tgccagcaca 1920 ggcacgctac ttgatgaaca catggcgcgg atggtcttgc gagagtgcac aagcatacca 1980 caaagtagcc aaaaacttca gcaccacatg caaaagtctg gataacaagg tgacactatt 2040 gggtgagcca ctggatctcg ccgtgttctt cgagtgggag acagtgctga acaggggctt 2100 cggtaaaatg tcctggagtg acgaaatccg tgatcgtcga gacctgaccc agaatgtgga 2160 tctcggggta cctgaagcgg aacaacacat tagagacatc atgctggaaa taaaaagtaa 2220 gatgaaaaaa cgaggaggta agctactact caacaggacc tgggagcagt tctacagtgc 2280 aagatctagg gagacaccag ccggctcggc ctcttcactt gatccttaca ttctagagtg 2340 taaacaaaaa gtcaaagacg ctacgaaggc agacattacg aagacgcagg tactatcgtt 2400 catggccgat ggctacacta ttgaccagct actaagtaag aagccacaag tgctcgcaac 2460 agtctcaatc aagtacgaat ggggtaagat gcgtgcgcta ttcgcagcag tagttgagca 2520 ctacctactc gcagcttttg cgttcactgg tgtggaagac ttcatgccta atgactgccc 2580 agtcgggaaa ggtgctgacg catccgctgt ctgcagtaag gtcatggcca tggcaaagag 2640 ctcggtgtac gtctgcgtag acgcagctaa tttcaatatt ctgcacactt tcgccttgat 2700 gagcgcagta attagaatat acggcgaagt gttccacgac tggctgagcc cagagcagca 2760 agagacggtg agatggctca tggaagcgga actggatcaa cgagtcgtgc tgaacaagag 2820 ccagttggat gcggagctat acgaagaggg catgcgtgac ggctggatca cacaacacgg 2880 tgacaagcta atcgtccagg tactgggtgg gctgttctca gggcatagac tgacaatgtt 2940 catcaacacg gtactgaacc gcgtgtacta cagggtggca gctgccagag cacacactga 3000 acctgacgct ctacactcag gagatgacgt atttgcttgt tatcagtcca ttggtgaggc 3060 gctgcgtgtg aaggcgggtt ttaagagctt tgggtatacc ctgcaactca ccaaatgttt 3120 cctgctaggc gtagctgagt tcttacgcat atcgcataag aacaacaaca cttcacagta 3180 ctacgccagg agctgcgcaa cttctgtaca tgggaggata gagaccggcg aggctaacga 3240 tatgcaggca ttagcgacag caaacattac gagagcatgc gaggcgatgc tgagatacgg 3300 agagcgtcga gtgtttatgc aagttgtagc catgcagaat gccggagtgt gtgcacgttg 3360 gtccgtgcct acgtacgttt acgcggctta tatcataacg ccaacattac taggaggtat 3420 gagatgcggt cactccgaag aatcactact atccaacttc gcaatagaga ggatagcaaa 3480 tgtgaattcg ccggcagttg cgttcttcca acagactccg ggcgtgaagc aggcagcgcg 3540 agacattgtg caggctctgg gccttacgga gcattacaat agagcaggca gagccatagc 3600 ggcaggtatc gcaactagga gcgtgctatc agcgttcagc atgtcactgc gctggatggg 3660 agaccaagta cacgtggcga tgaagaggtg ggctgggaag tacgcgcaca tacgacaatc 3720 gcgagattac atcttgtcaa agagtgtcgg gctgttcaat ttgttatggg aggaaggcca 3780 ctttggcgag caattcgata gagtgacgca ggtacacagc tcatggctag gtaaaatatt 3840 agaagtagca ctgatgccag cgcaggtgat caagaacgga ctagcggaca cactaatgga 3900 taaggtgggg atgctatctg aagtgcgcag aatacaggca ggtatgcgag agtggtgagc 3960 agcataagaa cacattgaat cacagaacaa ggggtaagct aaaacgcccc atgactaagt 4020 cataaaagat agtaaaacac atattatagc ggcaacgcaa ttcgatagat atacacgcta 4080 ttgatcatga gaatattcg 4099 //