ID AB613825; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC AB613825; XX DT 04-OCT-2011 (Rel. 110, Created) DT 18-OCT-2011 (Rel. 110, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus DNA, segment A, complete sequence, host: DE Cucumis sativus. XX KW . XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Mizutani T., Daryono B.S., Natsuaki K.T., Ikegami M.; RT ; RL Submitted (09-FEB-2011) to the INSDC. RL Contact:Tadasuke Mizutani Tokyo University of Agriculture, Graduate School RL of Agriculture, Department of International Agricultural Development, RL Laboratory of Tropical Plant Protection; Sakuragaoka, 1-1-1, Setagaya, RL Tokyo 156-8502, Japan XX RN [2] RC DOI:10.1094/PDIS-03-11-0196 RX DOI; .1094/PDIS-03-11-0196. RX PUBMED; 30731770. RA Mizutani T., Daryono B.S., Ikegami M., Natsuaki K.T.; RT "First Report of Tomato leaf curl New Delhi virus Infecting Cucumber in RT Central Java, Indonesia"; RL Plant Dis. 95(11):1485-1485(2011). XX DR MD5; 0b9dce9a8de402f29b917e1a98eb8333. DR EuropePMC; PMC6460037; 30975814. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="A" FT /host="Cucumis sativus" FT /strain="ToLCNDV-Indonesia" FT /isolate="[Indonesia:Java:Cucumber:2008]" FT /mol_type="genomic DNA" FT /country="Indonesia:Central Java, Klaten" FT /collection_date="Aug-2008" FT /db_xref="taxon:223347" FT CDS 120..458 FT /codon_start=1 FT /transl_table=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:G3XFU4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G3XFU4" FT /protein_id="BAL03045.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKRKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /codon_start=1 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G3XFU5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G3XFU5" FT /protein_id="BAL03046.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKGRAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1047..1457) FT /codon_start=1 FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:G3XFU6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G3XFU6" FT /protein_id="BAL03047.1" FT /translation="MITDSRTGEYITADRAENGVYIWKIRNPLYFKILKHDTRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFQIWTGLRPPIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLEETIDVCTSHDIKLDIY" FT CDS complement(1177..1596) FT /codon_start=1 FT /transl_table=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:G3XFU7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G3XFU7" FT /protein_id="BAL03048.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLQCGCTYYISIN FT CHDHGFTHRGVHHCGSSREWRIYLENSKSPVFQNFETRHQALPNTARHNQDSNTVQPQP FT AESPGTSQVFSNFSNLDGLTPSDWDFLASLQNPGP" FT CDS complement(1499..2584) FT /codon_start=1 FT /transl_table=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:G3XFU8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G3XFU8" FT /protein_id="BAL03049.1" FT /translation="MAPPRRFRIDAKNYFLTYPKCSLTKEEALSQLQTLETPTAKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNYRFFDLVSPSRSAHFHPNIQGAKSASDVKTYI FT DKDGDVIEWGLFQIDGRSARGGQQTANDAYAKAINTGNKEDALKVLKELGTKDYVLQFH FT NLTNNLDRIFQPPSQVYASPFSISSFDRVPPQLVDWVSSNVVCASARPLRPISIVVEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNSALKQWAIKNAVFITLEEPL FT YSCRENIAPTEEEEEHSQEAS" XX SQ Sequence 2739 BP; 749 A; 586 C; 615 G; 789 T; 0 other; accgaatggc cgcgcaaatt tttatgtggg ccctcaacta atgaaattga cgctgcaatg 60 cttagttagt gcggggggac cattaaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttcccg aaagcgttca tggtctaagg tgcatgctag 180 ctgtgaaata tctgcaagag atagaaaaga actattcccc agacacagtt gggtacgatc 240 ttgtccgaga tctcatcctt gtccttcgag cgaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag gaagggcttg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt tccaaggggc 480 tgtgaaggcc cttgtaaggt tcagtctttc gaatctaggc acgatgtatc gcacattggc 540 aaggtcatgt gtgttagtga cgttacacga ggaactggac tcacacatcg cgtagggaag 600 cgattctgtg tgaaatccgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acgaaaaacc atactaacag tgtcatgttt tttttagttc gtgatcgtcg tcctacagga 720 acaccccaag atttcgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcag gtgttacgga agtggcatgc gactgtgacg 840 ggaggaactt atgcatcgag ggagcaagca ttagttagaa agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggc aagtatgaaa atcatactga aaacgcttta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcga gctttatatc atgtgaagtg 1080 catacatcaa tcgtctcttc caaaacatta tccaagacat gataaactgc ccttattaca 1140 ttataaattc ctatcacacc caacatatcc aggtacttaa ggacctgggt tttgaagact 1200 cgcaagaaaa tcccaatcgg agggcgtaag cccgtccaga tttgaaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cttgattatg 1320 tcgtgctgtg ttaggaaggg cctggtgtcg tgtttcaaaa ttttgaaata caggggattt 1380 cgaattttcc agatatatac gccattctct gctcgatccg cagtgatgta ctcccctgtg 1440 cgtgaatccg tgatcatggc agttgattga tatgtaatac gtgcacccac actgcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgtggg agcgatgttt tcgcgacagg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgaattttt ttcttcatcc agatattcct tatagctgct atttggacct ttattgcaca 1680 ggaagatagt gggaattcct cctttaatca tgacaggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt taggtagtgc ggatcaacgt 1800 catcaatgac gttgtaccat gcatcattgc tatacacctt tgggctgaga tctagatgtc 1860 cacacaagta attgtgtggt cctaagcacc gtgcccacat tgttttcccc gttctactat 1920 caccctctac tactatgctt atgggtctta aaggccgcgc agaggcacac acaacattcg 1980 acgaaaccca atcgacgagt tgaggaggaa ctctgtcgaa ggatgaaatt gaaaatggag 2040 acgcataaac ctgagaagga ggttgaaaaa tgcgatctaa attattagtt aaattatgaa 2100 actgcaagac ataatctttt gtgcctaatt cctttaacac tttcaacgca tcttctttat 2160 tccccgtgtt aatcgcctta gcatatgcat cgttggccgt ctgctgacca ccacgagcag 2220 atcgtccatc gatctggaac agaccccatt ctataacatc tccgtctttg tcgatgtatg 2280 ttttgacatc tgacgctgat ttagcaccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgtaat ttttgcactg aaatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct catgaagttc ccgacatatt ttgatgaatt 2460 tcttcgcagt cggggtttct agggtctgca attgggaaag tgcctcttct ttagttagcg 2520 aacactttgg atatgtgagg aaatagtttt tggcatctat tctgaaacga cgtggaggag 2580 ccatgaaaat tgtcgttttg attcagcgtc cctcaacttc ctctatgtaa ttggcgtctg 2640 gcgtcccata tataggttgg acgctaaatg gcagaattgt aatttttaaa agcaaataac 2700 tttaattcaa aatcgtcata gcggccattc gttaatatt 2739 //