ID AB608991; SV 1; linear; genomic RNA; STD; VRL; 3434 BP. XX AC AB608991; XX DT 14-JUL-2011 (Rel. 109, Created) DT 18-OCT-2011 (Rel. 110, Last updated, Version 2) XX DE Blueberry latent virus genomic RNA, complete genome, Japanese isolate. XX KW . XX OS Blueberry latent virus OC Viruses; Riboviria; Amalgaviridae; Amalgavirus. XX RN [1] RP 1-3434 RA Isogai M., Yoshikawa N.; RT ; RL Submitted (13-JAN-2011) to the INSDC. RL Contact:Masamichi Isogai Iwate University, Faculty of agriculture; 3-18-8 RL Ueda, Morioka, Iwate 020-8550, Japan XX RN [2] RX AGRICOLA; IND44685226. RA Isogai M., Nakamura T., Ishii K., Watanabe M., Yamagishi N., Yoshikawa N.; RT "Histochemical detection of Blueberry latent virus in highbush blueberry RT plant"; RL J. Gen. Plant Pathol. 77(5):304-306(2011). XX DR MD5; 11520184a4d26b8e9566633db971d5bf. XX FH Key Location/Qualifiers FH FT source 1..3434 FT /organism="Blueberry latent virus" FT /host="Vaccinium corymbosum" FT /mol_type="genomic RNA" FT /country="Japan:Iwate, Takizawa" FT /note="Japanese isolate" FT /db_xref="taxon:430710" FT 5'UTR 1..169 FT CDS join(170..982,984..3335) FT /codon_start=1 FT /transl_table=1 FT /ribosomal_slippage FT /product="fusion protein" FT /db_xref="GOA:B1NEV0" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B1NEV0" FT /protein_id="BAK52524.1" FT /translation="MAGASGSILPVETTEQTQARVSTALAPLTGVLGNIERFSVEAIIN FT SNLTVDIFLKAIKSLVAYAQQDILENIASAANTAGAIQHVINMTPKDLFDLSRWVKTAA FT GMEAISKITTQRRLLRQGGAGRSASQVAWVNLFTQQQADYAQEKKRKMTRFERKREDLK FT LQLAQLDTDEAASMERLAAKYPTQVALPATMETELVAACWAAYVADCDRRGITPSAKTN FT ASLTEAVKHYSANVRDQILTTYCEQENVQADLTRYAREKIQSFRDSGNQEESPVLEISI FT RQQLEQRLISLPLELRKFHMKQVPFGIPLHKRGRPSCKPLLTKLSPELLLRRTQIGHRE FT KPPLGIRTELAQPPLKALEDCSRIGVLRSLAPQADKLIPRSRSKWEAGVRKIIGGGELK FT DWFKAKSMYRGGGNLFDALRLLSACDDYDGYTRLKGNYSVEAAREKLLLPSGLRVPDGV FT GCVHMKNFNDEASAGPLCRAFGIRRKAGLKSRLEQFAWEIYDGIGNGDLDLGAIPPFLA FT RVGYRTKLVTGEKAMRKISTGDSIGRAIMMLDAYEQAFSSPIFNVISDAVTHLHSDPTS FT GWRNYLIRASSDWGKMYKEMRKAKVVVELDWKKFDRERPADHISFFIDVILSCFAPRTT FT REEKLLGAYRRAMENALLHRVLVTDDGGVLTVDGMVPSGSLWTGIIGTGLNILYIGYAL FT SDIGISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMFRANIDEEDFIIHRPPF FT FVTKAQAVFPPGTDLSKGTSSILNQCKWVQFEGEIIIDEAMGLSHRWEYRFQGKPKFLA FT NYWLPDGRSIRPATDSLERLLYPEGLHQTIEDYEMAVLAMVVDNPWNSHNVNHMMHRFC FT IVQQIKRQSMVGIKAEDVMWYSKLRGKEGEGIPYPQVAYWRRQEKKVFMEEIPELMGYI FT KKFQTFLSGVSTLYSRDSAGGIDAWMFMSILRGERDVGAGQFGNDIIEWCKFLNKNPLT FT SGLRAAKRFRGEVRSEEASTQVAQRWVEMISTVRERLRNPLLGSPRSFALWVSDMYAEN FT VFSNVS" FT CDS 170..1297 FT /codon_start=1 FT /transl_table=1 FT /product="ORF1 protein" FT /db_xref="UniProtKB/TrEMBL:D1D8L7" FT /protein_id="BAK52525.1" FT /translation="MAGASGSILPVETTEQTQARVSTALAPLTGVLGNIERFSVEAIIN FT SNLTVDIFLKAIKSLVAYAQQDILENIASAANTAGAIQHVINMTPKDLFDLSRWVKTAA FT GMEAISKITTQRRLLRQGGAGRSASQVAWVNLFTQQQADYAQEKKRKMTRFERKREDLK FT LQLAQLDTDEAASMERLAAKYPTQVALPATMETELVAACWAAYVADCDRRGITPSAKTN FT ASLTEAVKHYSANVRDQILTTYCEQENVQADLTRYAREKIQSFRDSGNQGGVTRVRNLY FT TAATGAAIDIPPPRAQEVPHETGPVRDPIAQTGEAQLQAVAHQALTGVVIEADPDRAQG FT EASSGDSDRASAASTESTRRLQPDRRVKKPRTTGR" FT 3'UTR 3336..3434 XX SQ Sequence 3434 BP; 899 A; 651 C; 962 G; 922 T; 0 other; ttggtatttt tattttcgga caccgaggtt ccttctgcgt gcgctatctg atagtcttcg 60 gctctcttgc tccttacaat tgctttcctc tcttttgcaa tcttgcttgt ttgtttttct 120 tttgccggac taactttttc aggtctctat tctcttcatc ttaacgacga tggctggtgc 180 tagtggttca atccttccag ttgagactac ggagcagact caggctaggg tttctactgc 240 tttagctccg ctgactgggg ttttgggtaa tattgagcga ttctctgtgg aggctattat 300 caattccaac cttactgttg acatcttctt gaaggctatc aagtctttgg tggcttatgc 360 tcagcaggac atccttgaga acatcgcctc agcggccaac acagctggtg ctattcagca 420 cgttattaat atgactccaa aggatctctt tgacctatca aggtgggtga agactgctgc 480 tggaatggag gctatttcca agattactac ccaaaggaga ttgctgaggc aaggtggtgc 540 ggggaggtct gcttctcagg ttgcctgggt taaccttttt acccagcaac aggcggacta 600 tgctcaggag aagaagagga agatgactag gtttgaaagg aagagggagg acttaaagtt 660 gcagctggca cagcttgata ccgatgaggc tgcttccatg gagagacttg ctgccaagta 720 ccccactcaa gtggccttac ctgctaccat ggagacagag ttggtggctg cgtgctgggc 780 ggcgtatgtt gcagattgtg ataggcgggg gattacaccc agtgccaaga cgaatgcttc 840 tttaactgag gcggtgaagc attatagtgc taatgtgcgg gaccagattc ttacgaccta 900 ctgtgaacag gagaatgttc aggcagatct gaccaggtat gccagggaga agattcagtc 960 ttttcgtgac tcaggaaacc agggaggagt cacccgtgtt agaaatctct atacggcagc 1020 aactggagca gcgattgata tccctccccc tcgagctcag gaagttccac atgaaacagg 1080 tcccgttcgg gatcccattg cacaaacggg ggaggcccag ctgcaagccg ttgctcacca 1140 agctctcacc ggagttgtta ttgaggcgga cccagatcgg gcacagggag aagcctcctc 1200 tggggattcg gacagagcta gcgcagcctc cactgaaagc actagaagat tgcagccgga 1260 tcggcgtgtt aagaagcctc gcaccacagg cagataaact gataccacgg agccgtagca 1320 agtgggaggc cggcgtgagg aagatcattg gaggtgggga acttaaggac tggtttaagg 1380 ctaaaagcat gtatagagga gggggtaact tatttgatgc attacgatta ctctccgctt 1440 gtgacgatta tgacggttac actagactta agggaaacta ttctgttgaa gctgctaggg 1500 aaaaactact attaccttct ggattgaggg tgcctgatgg agtaggttgc gtacatatga 1560 agaattttaa tgatgaagcg tcagcaggcc cattgtgccg ggctttcggt atacggagaa 1620 aggcaggttt gaaatccagg ttagagcaat tcgcttggga aatatatgat ggaataggta 1680 atggggacct tgatcttggg gccattcccc cgtttctggc gagggttggt tatcgaacta 1740 agcttgtgac aggagagaag gctatgagga aaatttctac aggtgattca attggcaggg 1800 ctattatgat gttagatgca tatgagcagg cattctcttc accaattttc aacgtgatta 1860 gtgacgcagt tacgcaccta cattctgacc caacttcagg gtggaggaat tatcttatca 1920 gagcttcttc agactggggt aagatgtata aggaaatgag aaaggcaaag gttgtggtgg 1980 agctagactg gaagaagttc gatcgtgaga ggcctgcgga ccacatatcc ttcttcattg 2040 atgtaattct ttcatgcttc gcaccgagga ctacccgtga ggagaaattg ttaggagcat 2100 acagacgggc tatggagaat gctttgttac acagagttct agtgaccgat gatgggggag 2160 tattgaccgt tgacgggatg gtgccgagtg ggtcattatg gacagggatc attggaacag 2220 ggttgaatat tctgtacata ggctatgctt tgagtgacat aggtatcagc cctctcaact 2280 atgtgccgaa atgtgcgggt gacgataatc ttactttctt ctcaagggat tatggggatg 2340 cggccttcaa gcggttgagg gtgaagttga atgagatgtt ccgggctaac attgatgagg 2400 aggatttcat tatacatcgt ccgcccttct tcgtgactaa ggctcaggca gttttccctc 2460 cagggactga tttatctaag ggaacgagca gcattctgaa tcaatgtaaa tgggttcaat 2520 ttgaagggga gataatcatt gatgaggcta tgggattatc gcatagatgg gaatatagat 2580 ttcaaggaaa gccaaagttc ttagctaatt attggttacc agatggaagg agtattaggc 2640 ctgcaacgga ttcgctagaa agattgcttt acccagaggg attgcatcaa actatagaag 2700 attacgagat ggcggtactg gctatggtcg ttgataatcc atggaactca cataacgtaa 2760 accatatgat gcacaggttt tgtattgttc agcagatcaa aaggcagtcc atggttggca 2820 ttaaggcaga ggacgtgatg tggtactcta agttaagagg gaaagagggt gaaggaattc 2880 cttacccgca ggtggcatat tggagaaggc aggagaagaa ggtcttcatg gaagagatac 2940 cagaactaat gggctacata aagaaatttc agactttcct ttcaggagtt tcaactctat 3000 acagccggga ctcagcgggg ggtatcgatg cttggatgtt catgagcatt ctgcgtgggg 3060 agagagatgt tggggcagga cagtttggaa atgatatcat agaatggtgc aagttcctaa 3120 acaaaaatcc tttaacaagt ggtttaagag cggcgaagag atttagaggg gaggtgagat 3180 cagaggaggc cagtacgcag gtagcacaaa gatgggtaga gatgatttct acggttaggg 3240 agaggctcag aaatcctctc ctagggtctc cacgaagttt tgccctatgg gttagtgata 3300 tgtatgccga gaatgtattt agtaatgttt cttaaatgca tgtataaatt gttttttgta 3360 ttgagtattg agaaatgaag ttttattttg atagtgacaa acgcaccggg tcaccggtac 3420 gtgtgtcact atcc 3434 //