ID AB597949; SV 1; circular; genomic DNA; STD; VRL; 5639 BP. XX AC AB597949; XX DT 02-DEC-2010 (Rel. 107, Created) DT 06-AUG-2018 (Rel. 137, Last updated, Version 3) XX DE Chaetoceros protobacilladnavirus 4 DNA, complete genome. XX KW . XX OS Protobacilladnavirus tenuis OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; OC Baphyvirales; Bacilladnaviridae; Protobacilladnavirus. XX RN [1] RP 1-5639 RA Tomaru Y., Nagasaki K.; RT ; RL Submitted (29-OCT-2010) to the INSDC. RL Contact:Yuji Tomaru National Research Institute of Fisheries and RL Environment of Inland Sea, Harmful Algal Bloom devision; Maruishi 2-17-5, RL Hatsukaichi, Hiroshima 739-0452, Japan XX RN [2] RC DOI:10.3354/ame01517 RA Tomaru Y., Shirai Y., Toyoda K., Nagasaki K.; RT "Isolation and characterisation of a single-stranded DNA virus infecting RT the marine planktonic diatom Chaetoceros tenuissimus"; RL Aquat. Microb. Ecol. 64:175-184(2011). XX DR MD5; 9bb9bba8c819a82a178331ff8080bb40. DR EuropePMC; PMC3840382; 24275766. DR EuropePMC; PMC3866115; 24358139. DR EuropePMC; PMC4292505; 25452289. XX FH Key Location/Qualifiers FH FT source 1..5639 FT /organism="Protobacilladnavirus tenuis" FT /host="Chaetoceros tenuissimus" FT /lab_host="Chaetoceros tenuissimus" FT /isolate="CtenDNAV06" FT /mol_type="genomic DNA" FT /country="Japan:Fukuoka, Ariake Sound" FT /lat_lon="33.08 N 130.36 E" FT /isolation_source="sediment" FT /collected_by="Yuji Tomaru" FT /collection_date="2005-04-26" FT /identified_by="Yuji Tomaru" FT /db_xref="taxon:3052706" FT misc_feature join(5143..5639,1..378) FT /note="double-stranded region" FT CDS complement(496..1743) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:E3WH27" FT /protein_id="BAJ40165.1" FT /translation="MVQHDVQNIGRKRDFRTVTPEAPLEMPSGQRLHYTEDLAVIGPEP FT ERAPYDIVPFAGDELKEQMTLIRNNGMTEQQAISYFTDYAEKSHLGEFSAAAYSAPSGV FT AIRVNPHTGLKEAFIAGTRGPLDWGRNIIEGADSIVSAGLHKVTNIMPKGELRNKAEAA FT ANVLENVSVPGRISKILTRSEGEELAETFREEGVQVIYGHSRAGAILQYFPEEEFTTIA FT LDGANIVGHDPMSAPNFSSDDIFSRTIGIGSRKRVELPGRSFHKAWETKAKKAKADKKA FT EDRKKSKLGVPLAELKKEFYEQADKATRRQHMKLVERAKTKIGKKFAANLAKYIAKQSA FT ETAIKALPGGSYLPIGQASAPVAAYPPLPRLVEGDLRSGTVVPYTKKRNKKKMTSARKS FT KYARLNDELPHMGDID" FT CDS complement(1845..2963) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:E3WH28" FT /protein_id="BAJ40166.1" FT /translation="MPVRKKRTGKRNARGRGTRKPARKKATRKKAPATSVRKNPTSSHH FT AQSFAVMTNPFSKATQRPKIPDGSTVASLSRRIQRVSEIKNKQGEDIMDLVMCPALGLA FT CVIKNVDGENATLLYKHYPFINQGVESSFDGAQIVNDHAIAKWRLVSQGISFQLANTDE FT ENDGWWEACRFNPTIDPAHFDLARADGTQSGTFAGNTVLLTPDSNYFSSGTGADGPAFT FT LKGNMVEQPGYTTGLLKDIHKHQFKLLNNNHNIEWQDRNQELSISGVISSTDNVNSVVN FT LQDADKFLQLYNELYCNSYDCIFIRFHCRVNNGSTSNGSKLIMNAIQNVEMVYSPQSDL FT ATYHEINKAHAKVKAYLDKMNDSQNVVMRNAR" FT CDS 3416..4756 FT /codon_start=1 FT /transl_table=1 FT /product="putative replication-associated protein" FT /db_xref="UniProtKB/TrEMBL:E3WH29" FT /protein_id="BAJ40167.1" FT /translation="MHFRNMSNNSFDIQELICDDASIDCSISINTTPSVDFLETELKEP FT TNNTLISRAILTYFPPTSDAKYLEPEFMLGQDIRRLSNWWSQYEKCPESGAVHIHAYAE FT FKRELRPRFNLLDELIRSHVDCWNCRTARKSSESQRQGAINYVHKFETRLDGFQPFTWP FT KNESNAKFDPSFVRTNSKQNKRKARDDAIEEQRQYIESKPRIWTWDQILHENEASKKLL FT VTCSWGKKYHEGRHAEDKRRDVTDVIIYYGAGGTGKTTLCMEYNQTSSLEPRVERYYRR FT NPDDGNFWGGGRTAYKGQRVIHFEEFSGQEPFSRLKEVCDIGKPGPSVNIKGAGVDLNH FT HTVMFSSNVHPAGWYRNLWRDDPKQFHPFWRRVTKVVFFPSHRPDGSMNIPDEDNPPHM FT IDQTDEWKALNGSYEACMEHADEHWPVREVSVDGFVKSFNHSHQTSA" XX SQ Sequence 5639 BP; 1394 A; 1370 C; 1176 G; 1699 T; 0 other; tggtttgact tcggttggtg ttccatccgt gacgtcatca cctctgcttc gcgcactttt 60 cactggtgcc cacagaactg gctcttgtac tacgttcgcc gtgttgactt gagaggaatg 120 attccaccag aatggtttga tactaaggtt gacaaccgct tgtttgagtg ggacagagag 180 gctcgtgcag gaatcccaca gaatattcgt gcgaatagcc cagtcatggc aaataatgac 240 atttatgagt ttgaaatgag tgatttagac ggagaaacta tcggatccat tgatacttgg 300 tccattcatc cagctggtga cccagctttc gagtttgatt tctccgattc cgaagatgaa 360 gaagataatt agttaagttt ataagtttta tatttaattt tacctttatt ttttattcat 420 taagacaccc accccaggca tcttcccctt cttaataaaa taaagggacc ctgaccaccc 480 taacaccact cctcactaat caatatcacc catgtgtggt agttcgtcgt tcaaacgcgc 540 atacttagac ttccttgcag aagtcatctt ctttttgttt cgctttttgg tatagggtac 600 gacagtaccg ctacggaggt ccccttcaac gagtctagga agtggtggat aagcagccac 660 cggtgcactt gcctggccaa tcggcaaata agaaccacct ggcagtgctt ttattgccgt 720 ttcagcactt tgcttggcaa tgtactttgc tagattggct gcaaactttt tgccaatctt 780 tgtcttggct ctctcaacaa gcttcatatg ctggcgcctt gtcgccttat ctgcttgttc 840 atagaactct ttcttcagtt ccgcaagcgg aactccgagc tttgacttct tacgatcctc 900 agccttcttg tcagccttag cttttttagc tttagtctcc caagccttgt ggaatgatct 960 tcctggtaat tccacacgtt tacggctacc gattccaatt gttctactga atatgtcatc 1020 actagaaaaa ttgggtgcac tcatcggatc gtggccaacg atattggcac catccagagc 1080 aatagttgta aactcttcct ctggaaagta ttgcaatatc gcgcctgctc tgctatgccc 1140 gtaaataact tgcacaccct cttccctgaa ggtctctgct agctcttcgc cttcgcttcg 1200 agttagaatt ttggagattc gtccaggaac acttacattt tccaagacgt ttgctgccgc 1260 ctccgctttg ttcctaagct caccttttgg cataatgttt gttaccttat gcaaaccagc 1320 actgacaata gaatcggccc cttcgattat atttctcccc caatctagag gacctcgggt 1380 ccctgctatg aaggcctctt tgagtccagt gtgcggattt acgcgaatag caacgccact 1440 aggggcgctg tacgcagctg cagagaactc gcctaagtgt gacttttcgg cgtaatcagt 1500 aaaataggaa atggcctgtt gctcagtcat tccattgttt ctaattaacg tcatctgctc 1560 ttttagctca tctccagcaa atgggactat atcataaggt gccctctcag gttcgggtcc 1620 tatcacagcc agatcttcag tgtaatgcaa tctctgtcca ctcggcattt ccaatggagc 1680 ctcgggagtg acagttctaa agtcccgctt acgtccaata ttttgaacat catgttgcac 1740 catggcaaca tctaggattt catgttctgc actattgtta ctatctacat tttgttagcg 1800 ttacgatgag caccattact aattaccccc aaaaattatc acccttacct tgcattccgc 1860 ataactacat tctggctatc gttcattttg tccagataag ccttgacttt cgcatgggct 1920 ttatttatct catgatatgt cgctaaatca ctctgtggac tgtaaaccat ctcaacattt 1980 tgaattgcat tcataattag tttcgaacca ttactggtac ttccgttgtt tactctgcaa 2040 tggaaacgga tgaaaataca gtcgtaactg ttacaatata gttcattgta taattgcagg 2100 aacttatctg catcctgcag atttacaaca gagttgacat tatcagtact gctgattaca 2160 ccactgatac taagttcctg attacggtct tgccattcaa tattgtgatt gttgttcagg 2220 agtttaaact ggtgcttatg aatgtccttc aataagccag ttgtatatcc tggttgttcg 2280 accatatttc ccttaagggt gaacgcgggc ccatcagctc cggttccgga gctgaaatag 2340 ttggaatcag gtgttagcaa caccgtgttc ccggcgaagg ttccactttg agtaccatca 2400 gctctcgcta aatcaaagtg agctggatcg attgtaggat taaatcgaca agcttcccac 2460 catccgtcat tttcttcatc agtgttggct agctggaatg agattccttg ggaaaccaat 2520 ctccatttcg ctattgcgtg atcattgacg atttgagcac cgtcaaagct actctcaaca 2580 ccctgattaa taaaagggta atgcttgtag agaagagttg cattctctcc gtctacattc 2640 tttatgacgc acgcgagccc gagagcggga cacataacca aatccataat atcctctcct 2700 tgtttattct tgatttcgct tacgcgttgg attctcctcg acagtgaggc cactgtcgac 2760 ccgtcgggaa tttttgggcg ctgagtagcc ttgctaaaag ggttagtcat aaccgcaaaa 2820 gactgcgcat gatgcgacga cgtcggattc ttccgaaccg aagtcgctgg cgccttcttc 2880 ctcgtcgcct tcttcctcgc tggctttcgg gtaccgcgtc ctcttgcatt tctttttcca 2940 gtacgctttt ttctaaccgg catttagctt ctttacttga ctatcttatt atgttacgta 3000 tttgctctaa acaaatttat gagcacattc cgaggcctca gaatgacata ctactctacg 3060 tagcttgcac caaaattatt tcataatttt gtcgtatatt tcggtgcaac tttctccgat 3120 cgtagggcgt cgtacttatt actactacat gcggagaaac ttgcaccagc accgcaaaga 3180 atctctttaa tcatctttgc ggtgcttcat tcttgcgaaa tatatctgat tgacatcaaa 3240 taaatggcct aagccatttc tagcgcaggg gtgatttgag tcacgttccc acggtctttg 3300 agtcacgcgc catcttttgg cttcgggtta ctaataaccc ttttgatgac tcgcatacct 3360 tctccacaga gttgttgtca tatcctgtct actctttctc tcataaatta ttaaaatgca 3420 ctttcgtaac atgtccaaca attcattcga tattcaagaa ctcatctgcg atgacgccag 3480 tattgattgt tcgatctcca tcaacactac gccttctgtc gatttccttg agacagagct 3540 caaagaacct acgaacaaca cactcatcag cagagctatc ctcacatact ttccacctac 3600 ttctgacgcc aagtacttgg aacccgagtt catgcttgga caggacattc gtaggctttc 3660 caattggtgg agtcagtacg aaaaatgtcc tgagtctggc gcagtgcaca ttcatgcata 3720 cgcggaattc aaacgcgagt tgcgaccacg tttcaatctc ctcgatgaac tcattaggtc 3780 tcatgttgat tgttggaatt gccgtactgc gcgcaaaagc agtgaatcac agcgccaagg 3840 agccatcaat tatgttcata agtttgagac acgcttggac ggttttcagc cttttacttg 3900 gccaaagaat gaatcaaatg ccaagtttga tccatcattt gtacggacca attccaagca 3960 aaacaagaga aaagctcggg acgatgcaat agaggaacaa cgtcaataca ttgagtctaa 4020 acctcgtatt tggacatggg accagatcct tcatgagaat gaggcctcca agaaacttct 4080 agttacttgc tcatggggca agaagtatca tgagggtcgc catgctgagg acaagcgtag 4140 agacgtcacc gatgttatca tctactacgg agctggtggt actggtaaga ctaccctatg 4200 catggagtac aaccagacaa gtagcctgga acccagagtt gaacggtact accgccgtaa 4260 tcctgatgac ggcaacttct ggggcggtgg acgtacagcg tacaaaggac aacgtgttat 4320 tcattttgaa gaattcagtg gtcaggaacc tttttcacgc cttaaggaag tttgcgacat 4380 tgggaaacct ggaccgtcag tcaacatcaa gggtgctgga gttgacttga accaccatac 4440 tgttatgttc agctccaatg ttcatcctgc tggttggtat cgtaaccttt ggcgcgatga 4500 ccccaagcag tttcatccct tctggcgcag agtaactaag gttgtattct tcccatctca 4560 tagaccagac ggttcaatga acattcctga tgaggataat cctcctcaca tgatcgatca 4620 gaccgatgag tggaaggcac tcaatggttc atatgaagcg tgcatggaac atgctgatga 4680 acactggcca gtgagagagg tttccgttga cggtttcgtc aagtcattca accatagtca 4740 tcagacttca gcttaagtaa gatagttaat tagtaatttc caatcaatcc aacattgcgc 4800 gtttaaacgg ctcaatctac tttcccctcc ctctcattcc ttcggaccgc ccagttggat 4860 tgggaattgt ttgtttgttt ctcgtggcta tgtttgtctt catcctctat ttacttcgct 4920 ccgctacgct acgctacact actaacggat tgcgacttcg tcgccactct gtttcttttc 4980 attctttttt tttctttttc ggtcacgttc cagtgcctcc ggcaccagaa ctccccgtgg 5040 gagaagttgc tgaaaggcat cgccgggcta ccgccctagt gctcctcctt aactttcagg 5100 ctacctacgg tgtcgtgggg gattggggct aaatttgtct tagtcccgcg tgatatgtgt 5160 tcgggtttag gtcgtggggt ggggtttcat tcacgtttca ttcgtaaccc caccaggtgt 5220 caagcaatga cccgtcatgc ggagtcatta caaagggacg gtagcgttgt ttttgctcat 5280 tttcattcac agatgtgctc ataaaatcaa aaatgtgcag atacacaaca ctttaccaaa 5340 tcgacgaggt agaaaacaac aaccaagaag cagatatgat ccgtgttcca gcagttgtag 5400 gctaccagta ccctctaaat gcaatcgtgc atccaagaac taccattcca gttgacgaca 5460 cccttcattg cttcaaggtt ttgctcgaac atgaaagtcg cgaggtctac gtcatcaaag 5520 ataacggtcg ttgttacgga ttcactggtg aggacgttaa cgatctcatt gaggagtggc 5580 atgtggttgg tgttctcaat gaagatgaac gtgatgagat gttgcagtac ttcatcagc 5639 //