ID AB586645; SV 1; linear; genomic RNA; STD; VRL; 7230 BP. XX AC AB586645; XX DT 06-OCT-2011 (Rel. 110, Created) DT 27-JAN-2012 (Rel. 111, Last updated, Version 2) XX DE Luna virus genomic RNA, segment L, complete sequence, strain: LSK-1. XX KW . XX OS Mammarenavirus lunaense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-7230 RA Ishii A., Sawa H.; RT ; RL Submitted (07-SEP-2010) to the INSDC. RL Contact:Akihiro Ishii Hokkaido University, Research Center for Zoonosis RL Control; Kita-20, Nishi-10, Kita-ku, Sapporo, Hokkaido 001-0020, Japan XX RN [2] RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B., RA Takada A., Mweene A., Sawa H.; RT "Novel Arenavirus, Zambia"; RL Emerg. Infect. Dis. 17:1921-1924(2011). XX DR MD5; 79f3a7e663e8e8a1f916aaacf1de6da7. DR EuropePMC; PMC3310648; 22000372. DR EuropePMC; PMC3557881; 23171649. XX FH Key Location/Qualifiers FH FT source 1..7230 FT /organism="Mammarenavirus lunaense" FT /segment="L" FT /host="Mastomys natalensis" FT /strain="LSK-1" FT /mol_type="genomic RNA" FT /country="Zambia:Lusaka" FT /isolation_source="kidney of rodent specimen: CZC 09LR34" FT /collection_date="12-Aug-2009" FT /note="CZC (Research Center for Zoonosis Control, Hokkaido FT University)" FT /db_xref="taxon:3052315" FT CDS 133..429 FT /codon_start=1 FT /transl_table=1 FT /gene="Z" FT /product="Z protein" FT /db_xref="GOA:G3XEV8" FT /db_xref="InterPro:IPR003224" FT /db_xref="InterPro:IPR024183" FT /db_xref="InterPro:IPR038485" FT /db_xref="UniProtKB/TrEMBL:G3XEV8" FT /protein_id="BAL03413.1" FT /translation="MGKAQSKQNHIAQGSEPRTELIPDASGYGPEFCKSCWFERRGLVK FT CYDHYLCMNCLTLLLTISDRCPICKYPLPTKLQINKTPTAPKESASNPPPYSP" FT CDS complement(533..7180) FT /codon_start=1 FT /transl_table=1 FT /gene="L" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:G3XEV9" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR026382" FT /db_xref="UniProtKB/TrEMBL:G3XEV9" FT /protein_id="BAL03414.1" FT /translation="METSVCEAKDLISKYLANDQRLSRQKLNFLIQSEPQNLLIEGLKL FT LSLCIELDSCEANGCEHNTEELSVEVILLNRGILCPGLPFVVPDGFKLTGNVLVLLECF FT VRSSPSNFEQKYNEDSVKLNSLKQDLQSVGVTLLPIIDGRTVFDHTFMPEWANEKFRSI FT LFSLLQFAQESSRMLEESEYSRLCESLRNVEGKRSGLESINILQDCRTTHHEEILKLCH FT MGIDNSMSSIDVKREIINEFQAFRNGVSSGAIPRQFRRVDKSELLKSFCKMYPSDFGAE FT AESMEKLRGEFLTLSPTITLLYADIDDTEELRPKHSCVPAWRSLLNKIKSLHILNTRRK FT TLLLFDSIILLCHAVDKEVVGHFEDSEWLGTSFLSVNDRLVSLTATKKELYQWMERRRT FT NQVRNLGSGHEHQGLVYYNLVSSTLRKAEQALALVNLKFSDFGVLENIISISSFEKIMG FT VEVRGVMPSINYEKNDLSDFPYKLSPALETEDDLKRLSSISLAIVNSMKTSSVVKLRQN FT ERGAERFKKVICKEAYCQEFYMAGTRFRLLYQKTGECSKCYAINNSRKGEVCSFYADPK FT RFFPAIFSQSVISETIKVMVSWLNDCLELKQDLRDIEALLKMIFILVLTHPSKRSQKFL FT QNLRYFVMAYVSEYYHKDLLSKLEEKLITKVEFFLFRVLRTLISKVLNPTINTMLTNRF FT KFVLNVSYICHFITKETPDRLTDQIKCFEKYLEPKLEFDSVNVNPLEPAEATELSSLLM FT SGAAFLGKTSCTEMGGIQFKKPGISKKILSLVTSSFNNGTLFSKQEFKGEIKDPLVLSG FT CATAMDLASNKSVVINKYVDGERVLNYDYDKLVAAAVCQLSETFERKSKYFLSKEEYDY FT KIMKVIASLVIGSTKTSDGGISTEELDEVLISGAASSYFEDIKESVRTVMESYKSLSDE FT KLGKVNAGDINDLHKVVDNPMHLKLILSELSNHLIEDFDQSLMSDDDYKAVCEKVYLND FT ELKGKYFYLGPMDSCAISEITRAVTTRTYENAEYFLCFKSILLQMNANRLVGKYSHYKS FT KCINFKLNRERLMDDCRLSDRESNSEALSKALSLTNCTTAVLKNLCFYSQESPQSYTSI FT GPDTGRLKFSLSYKEQVGGNRELYIGDLRTKMFTRLIEDYFESLTGQFRGSCLNSESEF FT ENAVLSMKLNVSLAQVCYSLDHSKWGPMMNPLLFLVILQNIHWNSSDILEDVKSRDYVS FT TLLSWHIHKLIEVPHPVVNAMMRSYLKTNLGLKKSLHETLTEAFFFRHFKLGVVPSHIS FT SILDMGQGILHNASDFYGLITEKFINYSIGLLYEGTLKSYTSSDDQISLFDHKLTNLLD FT RDPDEFEYILEFHNYLSDRLNKFISPKSVIGRFVAEFKSRFYVWGDEVPLLTKFVAAAL FT HNVKCKEPHQLAETIDTIIDQSVANGVPVKLCNLIQQRTLDLLRYAQYPIDPFLMYCDS FT DVKDWVDGNRGYRIMRNIEQLCPGGTKKVRYFLRRLYNKLKTGELHEEFTAAYLSGDPS FT ESLQKICSLLNVDPLEESELSLCWLNLSAYFPLRMVLRQKVIYTGALNLEEEKLPTLVK FT TLQNKLSSNFTRGAQKLLSEAINKSAFQSSIASGFVGLCKTLGSKCVRGFDKSNYFIKS FT IVSQLEGRTDVKGFILKGMNLWSVPVCQRCSNDWLIKFLRPVLWDYMCIALSCALEIGP FT WVLGEPKLKAKIPAINFKPCDYFPLKPTITKLLEDKVGFNHIIHSFRRLYPSLFEKHLL FT PFMSDLASTKMKWSPRIKFLDLCVVLDVNCEAMSLISHVVKWKREEYYIVLSSELSEAH FT DRSHMSLTEERVVSTEDVAKNFLRQIFFESFIRPFVATSRTLGSFTWFPHKTSLPASEG FT LNLLGPFASFVEKVIYKGVERPMFKSDLYMGFSWMDMVIKPAYLNLNQLIASGITLDQQ FT FASLDEFWEALQSLPSRSTQLTFSVFFTIKSKGETLSEEFAFHVKTWGMIDHTGSFVLS FT RLEVLYSGQVHRSLLLDCWRLVLNTDQFCKPEPVWIVDADNLSEFLEDPKSIGQVVRLN FT VKLSENVTGLTEYDFVHVGPNPEPLPLVVEDGYLIEGRKKILPINPSIHDQDMEVLISE FT MDGSCVNSPPIVVGNILRQRLDQGLHWLELDLVGVVKKCRPNDYKVFLKDALQDVCEWL FT GFNGYNLCFSKTLGDIMVHSSQGKYRLKGRQCDKLFEEVREVQDID" XX SQ Sequence 7230 BP; 2157 A; 1689 C; 1243 G; 2141 T; 0 other; cgcaccgggg atcctaggca agtttgatgc tcatttgagt ggaatctagc cagctaggtg 60 cctatttcac cacccacact ctgagggagc ctcaagcaga acttgtctgc aaaactccct 120 ctaccattca caatggggaa agcccagtcc aaacaaaacc acatagccca aggctctgag 180 cccaggacgg agctgatacc tgacgcctca ggctatgggc ctgagttctg caaaagctgc 240 tggtttgaga gaaggggtct tgtcaaatgt tatgaccatt atttatgcat gaattgtctg 300 acattgcttc ttacaatctc cgacagatgc ccaatctgca agtatcctct gccaacaaaa 360 ctgcagatca acaaaacacc aaccgctccc aaagagtcgg ccagcaatcc cccgccgtac 420 agtccctgaa cccacccaac cacaaacctc cacccacccc aagctccccc ccgggggggc 480 cccccgccgg ggtccccccc gggggaaaga cggctgagcc caccgactga ggctagtcaa 540 tatcctgcac ctccctgacc tcctcaaaca gtttatcaca ctgcctccct ttcaatctgt 600 atttaccctg tgaactgtgt accattatgt cacctaaagt tttgctaaag cacaaattgt 660 aaccattaaa gcccaaccat tcacatacat cctgtagagc atctttaaga aacactttat 720 aatcattggg cctgcacttt ttgacaaccc caaccaggtc cagttccaac cagtgcaaac 780 cttgatcaag cctctgtctc aaaatgttcc caaccactat agggggtgag ttaacacaac 840 tcccatccat ttctgaaatc aacacctcca tgtcttgatc atgaatactc gggtttattg 900 gtaaaatttt cttcctgcct tcaatcaagt agccatcctc cacaaccaga ggcaggggct 960 caggatttgg tcctacgtgc acaaaatcat attcggtgag gcctgtaaca ttctcactta 1020 gtttaacatt gagcctaact acctgcccaa ttgatttggg atcctcaaga aattctgata 1080 ggttgtcagc atcaactatc cacacaggct ccggcttaca aaactgatca gtgttcaata 1140 ccaacctcca acaatccaat aacagagacc tgtgcacttg accactatat agcacttcta 1200 acctacttaa cacaaaggaa cctgtgtggt ctatcatgcc ccatgttttg acatgaaacg 1260 caaattcttc actcagggtc tcccctttac tcttaatcgt aaagaaaacc gaaaatgtga 1320 gttgagtgga tctactcggc aatgattgga gagcctccca aaattcatct aaagacgcaa 1380 actgctgatc aagagtgatg ccagaagcta taagctggtt tagatttaga taagctggtt 1440 taatcaccat atccatccaa gagaatccca tatataggtc tgatttaaac attggccttt 1500 caacaccttt ataaatcacc ttttctacaa atgatgcaaa tggaccaaga agattcagtc 1560 cctcagaagc agggagcgat gtcttatgag gaaaccaggt aaatgatcct aatgttctgc 1620 tagttgcaac aaaaggccta atgaaggact cgaaaaagat ttgtcttaag aagttctttg 1680 ccacatcttc agtacttacc accctttcct ctgttaaaga catgtgagat cgatcatgag 1740 cttctgacaa ctctgatgac agaacaatat agtactcctc tcttttccac ttgacaacat 1800 ggctaatgag agacattgct tcacaattga catccaaaac aacacataag tcaagaaatt 1860 ttattctggg agaccacttc atttttgttg aagccaaatc actcataaaa ggtaacaaat 1920 gcttttcaaa tagtgatgga tataaccttc taaatgaatg tataatatgg ttgaacccaa 1980 ctttatcctc cagcaacttt gtgattgtag gttttaaggg gaagtaatca caaggtttga 2040 aatttattgc agggattttt gcctttagct ttggctcacc taaaacccaa ggtccaatct 2100 ctaatgcaca agagagggca atacacatgt aatcccacaa cactggcctg agaaatttta 2160 taagccagtc atttgaacat ctctgacaga cagggacaga ccacagattc atacccttca 2220 aaataaaccc cttcacatca gttcgccctt caagttggct tacaattgac ttaataaagt 2280 agttggactt atcaaagccc cttacacatt tactccccaa tgtcttgcat aacccaacaa 2340 accctgaagc aatgctactt tgaaatgcac tcttgtttat tgcctctgat aggagttttt 2400 gtgctcccct agtaaagttg gaagagagct tgttctgaag agttttgact agggttggta 2460 atttttcctc ttcaagattc aaggcacctg tgtaaataac tttctgcctt aacaccattc 2520 tcaaagggaa gtaggcagag aggtttagcc aacacagact taactctgac tcttctaaag 2580 ggtctacatt aagtagtgaa caaatttttt gtaacgactc actaggatct ccagataggt 2640 aagcagctgt gaattcttca tgtaattcac cagttttaag tttattgtaa agtcttctaa 2700 ggaagtacct aactttcttt gttccacctg ggcaaagttg ctctatgttc ctcatgattc 2760 tataccccct attaccgtca acccaatctt tcacatcgga gtcacaatac atcaagaatg 2820 ggtcaatcgg atattgtgca tacctcagaa gatctaaagt tctctgttgg attagattgc 2880 agagcttcac gggcaccccg tttgccacag actgatcaat gattgtatca atagtctccg 2940 ccaactggtg cggttccttg cacttaacat tgtgtaaagc tgctgcaaca aacttcgtca 3000 atagtggaac ctcatcaccc cagacataaa accttgactt gaactcagca acaaaccgcc 3060 ctattacact ttttggacta ataaatttgt tcaatctgtc actcaagtaa ttatgaaatt 3120 ccaaaatgta ttcaaattca tcagggtctc tgtctagcag attagtcaac ttatgatcaa 3180 ataaggagat ctgatcatca ctggaagtat atgatttaag agtcccctca taaagtaagc 3240 cgatagaata gttaataaat ttttcagtga tcagtccata gaagtcggag gcattatgga 3300 ggattccctg ccccatgtct aaaattgagc tgatgtgaga gggcacaaca ccaagtttaa 3360 agtgtctaaa aaagaaagct tcagttagtg tttcatgtaa tgatttcttc aaccctaagt 3420 ttgttttaag ataggacctc atcatggcat tcacaactgg atggggaact tctatcaatt 3480 tatgtatgtg ccaggagagc aatgtgctca cataatctct acttttcaca tcctctaata 3540 tatccgaaga attccagtga atgttctgta agattacaag gaacaacagg gggttcatca 3600 taggtcccca tttgctatga tctagactgt agcatacttg agccaatgat acattaagct 3660 tcattgacaa cacagcattt tcaaactctg attcactatt taggcagctg cctctaaatt 3720 gacctgtcaa agattcaaaa taatcctcaa tcagccttgt gaacattttg gttcttaaat 3780 caccaatata aagttctcta ttcccaccaa cttgttcctt ataagataag gaaaatttca 3840 atcttcctgt gtcaggacca atagatgtgt atgactgtgg agactcttga ctataaaaac 3900 ataagttctt taaaactgca gttgtacaat tggtaagaga aagtgctttg ctcaaagcct 3960 cagaattact ttctctatca cttaatctgc aatcatccat taacctctct ctatttaact 4020 taaagtttat gcatttcgac ttataatgac tgtatttccc tacaagtcta ttggcattca 4080 tctgcaacaa aatggacttg aaacacaaga aatattctgc attttcatag gttctggttg 4140 tcactgccct ggtgatctct gagatggcac atgagtccat tggtcctaag taaaagtatt 4200 taccttttaa ctcatcgttt aaatagacct tctcacaaac tgctttgtaa tcatcatcag 4260 acatcaatga ttggtcaaag tcttctatta aatggttgga cagttctgac agaatcaatt 4320 tcaagtgcat tgggttgtca acaactttgt gtagatcatt tatgtcacca gcgttcacct 4380 taccaagttt ttcatcactt aggcttttat aactttccat cacagttctc actgactctt 4440 tgatgtcctc aaagtaggaa gaagcggcac cactaatcaa tacttcatcc agttcctcag 4500 tggatatccc tccatcagaa gtctttgtac taccaatcac tagacttgca atcactttca 4560 taatcttgta gtcatactcc tctttactta gaaagtactt acttttcctc tcgaatgtct 4620 ccgataattg acatactgca gcagcaacaa gtttgtcata atcatagttt agcaccctct 4680 caccatcaac atacttattt ataacaacac ttttattgct ggctaggtcc attgcagttg 4740 cacaaccact aaggactaaa ggatccttta tttcaccctt gaattcttgt ttactaaaaa 4800 gagtgccatt attgaatgat gatgtgacta aagacagtat ctttttagag atacccggtt 4860 ttttaaattg gatgccaccc atttcagtac atgatgtctt acccaaaaag gcagccccgc 4920 tcatcaataa gctggacaac tcagtggcct ctgcgggttc aagggggttc acattgacgg 4980 agtcaaattc taattttggc tccaagtatt tctcaaagca cttaatttga tctgtgagtc 5040 tgtctggtgt ctcttttgta atgaagtgac aaatgtaaga gacattgagg acaaatttaa 5100 acctattcgt caacattgtg ttaatcgtag ggttgagaac cttactaatc aatgttctca 5160 aaactctaaa aagaaaaaac tcaacttttg ttatcaattt ttcctccaac ttactcaaaa 5220 ggtccttgtg ataatattca gagacgtatg ccataacaaa gtatctcaaa ttttggagga 5280 acttttgaga tcttttgctc ggatgggtta aaaccagtat aaagatcatt tttagcaatg 5340 cttcaatgtc tctcaaatcc tgctttaatt ctaaacaatc attcaaccag ctcaccatca 5400 ctttaatagt ctcagatata actgactgcg aaaagatagc tggaaagaac ctcttaggat 5460 cagcataaaa ggaacagacc tcacctttac gagaattgtt aattgcataa cattttgagc 5520 attctcctgt cttctggtac aacagtctaa atctggtccc agccatgtaa aactcttggc 5580 agtaagcttc cttacaaatc accttcttaa acctctcggc acctctctca ttttgtctta 5640 atttgacaac agaggatgtc ttcattgaat tcacaattgc cagtgaaatg cttgagagcc 5700 gttttagatc atcttcagtc tccagtgctg ggctcagctt atacggaaag tcactaaggt 5760 cattcttttc ataattgatg gacggcatga cacctctcac ttcaaccccc attatctttt 5820 caaaacttga gattgaaatt atgttttcta aaacgccaaa atcagaaaat tttaagttaa 5880 caagtgccaa tgcctgttca gccttcctta gggtggagct aacaaggtta taatacacca 5940 gtccttgatg ctcatggcct gagcctagat tcctcacttg atttgtcctt cgtctttcca 6000 tccattgata caattccttc tttgtggcag tcaatgagac aagcctatca ttaacactta 6060 aaaatgatgt gccaagccac tctgaatctt caaagtggcc aaccacctct ttgtcaacag 6120 catgacacag caaaattatt gaatcaaaca acaacaaagt ctttctccta gtgttgagta 6180 tgtgaagact cttgattttg ttcagcaatg atctccaggc tgggacacaa ctgtgcttgg 6240 gtcttaactc ttcagtatca tcaatgtcag catagagtaa tgttattgtg ggagacagag 6300 tgaggaactc ccctctcaat ttctccatac tctccgcctc tgctccaaaa tctgaggggt 6360 acatcttaca aaaggacttt agcagctcag atttgtcgac cctcctaaat tgtctgggaa 6420 ttgccccgga gctcacacca ttcctgaagg cttggaattc attgattatt tctcgtttga 6480 catctataga gctcatagag ttgtcaatcc ccatgtgaca caatttaaga atttcttcat 6540 ggtgtgttgt cctgcagtct tgtaggatgt tgatactctc caacccagac cttttacctt 6600 ctacattcct taacgattca cagagtctac tatattctga ttcttccaac atccttgatg 6660 attcttgagc aaattgaagt agtgagaata agatggatct gaacttttcg tttgcccact 6720 ctggcataaa agtgtgatca aaaactgttc tcccatcaat tatggggagc aaagtgaccc 6780 ccacactctg taaatcctgt tttaaagaat ttaacttcac agagtcctca ttatactttt 6840 gctcaaaatt tgaaggtgaa ctcctaacaa agcattctag taaaaccaat acattcccag 6900 ttagtttaaa accgtctgga acaacaaagg gcagaccagg acacaatatg cctctattga 6960 gtaagatcac ctcaacactc aattcctctg tgttatgttc acaaccattg gcctcacagc 7020 tgtctaattc tatgcataga gaaagcagct tgaggccctc aatcaataag ttttgaggct 7080 cagattggat cagaaagttc aacttctgtc tggacagcct ctgatcattg gctaagtatt 7140 tggaaatgag gtcctttgcc tcacacacac ttgtctccat aataaggctc ccacaaaaga 7200 caacgtcaaa tgcctaggat cctcggggcg 7230 //