ID AB586644; SV 1; linear; genomic RNA; STD; VRL; 3377 BP. XX AC AB586644; XX DT 06-OCT-2011 (Rel. 110, Created) DT 27-JAN-2012 (Rel. 111, Last updated, Version 2) XX DE Luna virus genomic RNA, segment S, complete sequence, strain: LSK-1. XX KW . XX OS Mammarenavirus lunaense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3377 RA Ishii A., Sawa H.; RT ; RL Submitted (07-SEP-2010) to the INSDC. RL Contact:Akihiro Ishii Hokkaido University, Research Center for Zoonosis RL Control; Kita-20, Nishi-10, Kita-ku, Sapporo, Hokkaido 001-0020, Japan XX RN [2] RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B., RA Takada A., Mweene A., Sawa H.; RT "Novel Arenavirus, Zambia"; RL Emerg. Infect. Dis. 17:1921-1924(2011). XX DR MD5; 9dd2d9075f0298c4ad5966248e8d64ea. DR EuropePMC; PMC3310648; 22000372. XX FH Key Location/Qualifiers FH FT source 1..3377 FT /organism="Mammarenavirus lunaense" FT /segment="S" FT /host="Mastomys natalensis" FT /strain="LSK-1" FT /mol_type="genomic RNA" FT /country="Zambia:Lusaka" FT /isolation_source="kidney of rodent specimen: CZC 09LR34" FT /collection_date="12-Aug-2009" FT /note="CZC (Research Center for Zoonosis Control, Hokkaido FT University)" FT /db_xref="taxon:3052315" FT CDS 73..1548 FT /codon_start=1 FT /transl_table=1 FT /gene="GP" FT /product="glycoprotein precursor" FT /db_xref="GOA:G3XEV6" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/TrEMBL:G3XEV6" FT /protein_id="BAL03411.1" FT /translation="MGQIITFFQEVPHIIEEVMNIVLITLSLLAILKGIYNLATCGLLG FT LISFLFLCGRSCTMVYKDNYALNSVELDMSTLNYTMPLSCSKNNTHHYIQTYNDSGLEL FT TLTNNSILSHKFCNLSDAHKRNLYDHTLMSIVTTFHLSIPNFNQYESMACDFNGGKITV FT QYNLSHSSPTDAANHCGTVANGVLDTFRRMHWGPAHFPNPPFTIGGVSCIQTSYQYLII FT QNTTWEDHCQMSRPTPMGYLSLIAQRTRQLYISRRLMGTFTWTLSDSAGNDLPGGYCLQ FT RWMLIEAEMKCFGNTAVAKCNQQHDEEFCDMLRLFDFNKEAIRRLKVEAERSINLINKA FT VNSLINDQLIIRNHLRDLMGIPYCNYSKFWYLNDTRNGKTSLPKCWKVSNNSYLNETHF FT SNEIEEEANNMITEMLRKEYEKRQSTTPLGLVDLFVFSTSFYLISVFLHLIKIPTHRHI FT VGKGCPKPHRLNHMAVCSCGVFGQPGLPVRWKR" FT CDS complement(1609..3321) FT /codon_start=1 FT /transl_table=1 FT /gene="NP" FT /product="nucleoprotein" FT /db_xref="GOA:G3XEV7" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/TrEMBL:G3XEV7" FT /protein_id="BAL03412.1" FT /translation="MSNSKEVKSFLWTQSLRRELSGFCSNVKVQVIKDAQALLHGLDFS FT EVSNVQRLMRKEKRDDSDLKRLRDLNQAVNNLVELKSSQQKNVLRVGTLSSDDLLILAA FT DLEKLKSKITRSERPLTAGIYMGNLTAQQLDQRKALLQMIGMGQRGPNPAVRGDGIVRV FT WDVRNPELLNNQFGTMPSLTVACMCKQGQVDLNDVIQSLSDLGLVYTAKYPNTSDLDKL FT AQTHPVLNLIDVNRSAINISGYNFSLSAAVKAGASLLDGGNMLETIRVSPKNIQDILKA FT VLKVKRSLGMFISEAPGDRNPYENLLYKLCLSGDGWPYIASRTSILGRAWDNTAVDLGG FT NSPPESKPALPGGTRLAQAQGFPTALTYSQVMELKDSMLQLDPNAKTWIDIEGRAEDPV FT EIAILQPANGHYIHFYREPTDLKQFKQDSKHSHGLDIQDLFNVQPGLTSAVLESLPKNM FT VLTCQGADDIRKLLESQGRRDIKLIDVGMTKPEARKFEDEIWDHYKPLCKMHTGIVVEK FT KKRGGKEEITPHCALMDCLMYEAATVGNVKLPQLRAVLSKDLVFRTASPRVVL" XX SQ Sequence 3377 BP; 895 A; 803 C; 727 G; 952 T; 0 other; cgcaccgggg atcctaggca tttttggacg cgctttgcaa accactcatt tgatagtggg 60 gtgccaataa aaatgggaca aataatcacc ttctttcagg aggtgccaca catcatagaa 120 gaagtgatga acatagtcct catcactctg tcccttcttg caatactcaa aggaatttac 180 aacctggcaa catgtggact gttaggtttg atttcatttt tatttctctg tgggaggtca 240 tgcacaatgg tatacaagga caactatgct ctgaacagtg tggagctcga catgtccact 300 ttgaattata caatgccgtt gtcctgttct aagaacaaca cccatcatta cattcagacc 360 tacaatgatt ccggcttgga gcttacattg acaaacaatt ccattttgag tcataagttc 420 tgcaatctct ctgatgcaca caaaaggaac ctgtatgatc acacccttat gtccatagta 480 acaactttcc acctaagcat tccaaacttc aatcagtatg agtctatggc ctgtgacttt 540 aatggcggga agataactgt tcagtacaat ttaagtcact catcaccaac tgatgcagca 600 aaccactgtg gtacagttgc aaatggtgtc ctagacacat tcagaaggat gcattgggga 660 ccagcacatt ttcccaaccc ccccttcacc attggagggg tttcgtgcat ccagacaagc 720 tatcagtacc tcatcattca gaacacaaca tgggaagatc attgccaaat gtcaaggccc 780 acacccatgg gctacttatc actgatagca cagagaacaa gacaactata catttcaaga 840 agactaatgg ggacctttac ctggaccttg tctgattctg ccgggaatga tctgcctgga 900 ggttactgcc tacagaggtg gatgttgatt gaggctgaga tgaagtgttt tggcaacact 960 gctgtagcta aatgcaatca acagcatgat gaggagtttt gtgatatgct gagactgttc 1020 gatttcaaca aagaagcaat tagaagactg aaagttgagg cagagagaag catcaacctt 1080 atcaacaaag cagtgaattc ccttattaat gatcagctga taataagaaa ccacctgagg 1140 gatctaatgg gtatacctta ctgcaactac tcaaagttct ggtacctaaa tgacacaagg 1200 aacggaaaga catctctgcc aaaatgttgg aaagtttcga acaactctta ccttaatgaa 1260 acccactttt caaatgaaat tgaggaggag gccaacaata tgataacaga aatgctcaga 1320 aaggagtatg agaagagaca gagtacaact ccccttggtt tggtggacct ctttgtattc 1380 tcaacctctt tctacttaat tagtgtgttt cttcacctaa taaagatccc tacacacaga 1440 cacattgttg gcaagggctg ccccaaaccc cacagattga atcacatggc ggtttgtagc 1500 tgtggtgttt ttggccaacc aggacttcct gtgagatgga agagatgagg acccaggggg 1560 cccccgtgac ccaccgcctt atggcggtgg gtcacggggg cgtccccttt acaggacgac 1620 tctcggtgat gctgttctga acactagatc cttagaaagc acagccctta gttgtggaag 1680 tttcacgttc ccaactgttg cggcttcata catcaagcaa tccattaggg cacaatgtgg 1740 agttatctcc tctttcccac ctctcttctt cttttcaact acaatcccag tgtgcatttt 1800 gcacaagggc ttgtagtggt cccaaatttc gtcttcgaat ttcctggctt caggctttgt 1860 catcccaaca tcaatcagct tgatgtccct tcttccctga gactccaaga gcttcctgat 1920 gtcatctgcc ccctgacagg tgagaaccat gttcttaggt agactctcta acacagcgct 1980 agtaagtcca ggctgaacat tgaaaaggtc ttgaatgtcc agaccatgag aatgtttgga 2040 atcctgttta aactgtttta aatctgtcgg ttcacgatag aaatggatat aatgtccatt 2100 tgcgggttga agaatggcta tctcaacagg gtcctcagcc ctcccttcaa tgtcaatcca 2160 agttttggca tttgggtcca gctgcagcat agaatccttt agctccatga cttgagaata 2220 ggtcagtgca gtggggaagc cctgtgcctg tgctagcctg gtgccaccag gcaaggcggg 2280 tttgctctcc ggcgggctgt tccctcccaa gtcaacagct gtgttgtccc aggctctccc 2340 caggatagag gttcttgagg cgatgtaggg ccagccatca cctgaaagac acaatttgta 2400 caagaggttt tcatatggat tcctatctcc tggtgcttca gatatgaaca ttccaagtga 2460 ccttttaacc ttcaacacag ctttcagaat gtcctggata ttcttggggc tgactctgat 2520 ggtttcaagc atattccccc cgtctagtaa acttgcacct gccttgacag ctgcactcaa 2580 gctgaagttg tacccagaga tgttgatggc gcttctatta acatctatca aattgagaac 2640 aggatgagtt tgagctaatt tgtccagatc tgatgtattt gggtactttg ctgtatacac 2700 taaccctaaa tcactaaggg actggatgac atcgtttaag tcaacctgac cctgtttgca 2760 catgcatgca acagtcaagc ttggcatggt gccgaactga ttattgagta gttccgggtt 2820 tctcacatcc cacactctca ctatgccatc acccctcact gctggatttg ggcctctctg 2880 ccccatgccg atcatctgga ggagggcctt cctttggtcc agctgttgag ctgttagatt 2940 ccccatgtag attccggctg ttaagggcct ttcagatcta gtgatttttg atttgagttt 3000 ttcaagatct gcagcaagta tcagaaggtc atccgatgat aatgtcccca cacgtaggac 3060 attcttctgt tgtgaagact tgagctcaac aagattgtta actgcttggt ttaagtccct 3120 cagcctcttg agatctgagt cgtctctctt ttcctttctc atcagtcttt ggacattgct 3180 aacctctgag aagtctaggc catgtaagag tgcttgcgca tctttaatga cctgcacttt 3240 gacatttgaa caaaatcctg acagttccct tctaagggac tgggtccaca aaaaggactt 3300 gacttcttta gaattgctca tgtttcggaa tagttttcca atatgcgcaa ccaaagtagc 3360 ctaggatcca ctgtgcg 3377 //