ID   AB583217; SV 1; linear; genomic RNA; STD; VRL; 1416 BP.
XX
AC   AB583217;
XX
DT   12-DEC-2012 (Rel. 115, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 1)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: JIK2.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1416
RA   Kim O., Natsuaki K.T.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T.;
RT   "A viral disease report on Trichosanthes cucumeroides in Japan, as a
RT   reservoir host of cucurbit-infecting viruses";
RL   Unpublished.
XX
DR   MD5; b12b869102996c36aec7f89601fc961f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1416
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Trichosanthes cucumeroides M."
FT                   /isolate="JIK2"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Ibaraki, Tsukuba"
FT                   /collection_date="Nov-2008"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1210
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L0N2U4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L0N2U4"
FT                   /protein_id="BAM72040.1"
FT                   /translation="KSKLPEHRLEAITAAMIESWGYGELTHQIRRFYQWVLEQAPFNEL
FT                   AKQGRAPYVSEVGLKRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESRSTDDCQ
FT                   FVRDSNTHVFHQSKNEAVDAGLNEKLKDKEKQKEEKDKQKGKDNNGASDGNDVSTSTKT
FT                   GERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRAT
FT                   QSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDTSGVWVMMDGETQVDYPI
FT                   KPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYE
FT                   VNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLG
FT                   MRN"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1207
FT                   /gene="CP"
FT                   /product="capsid protein"
XX
SQ   Sequence 1416 BP; 445 A; 262 C; 355 G; 354 T; 0 other;
     caaatctaag cttccagaac atcgattgga agctattaca gcagcaatga tagagtcatg        60
     gggatacggg gagttaacgc accagatacg caggttttat caatgggtgc ttgagcaggc       120
     tccgttcaat gagttagcga agcagggcag agctccgtat gtatctgaag ttggattgaa       180
     gcgtttatac actagtgagc gtgggtcaat ggatgaatta gaagcataca tagataaata       240
     ttttgagcga gaaaggggag attcacctga gctactggtg tatcatgaat cgagaagcac       300
     tgatgattgt cagtttgtcc gcgacagtaa cacacatgtg tttcaccagt ccaagaatga       360
     agctgtggat gccggtctaa atgagaagct caaagataaa gaaaaacaaa aagaagaaaa       420
     agataaacaa aaaggaaaag acaataatgg agctagtgac ggaaacgatg tgtcaactag       480
     cacaaaaact ggagagagag atagagatgt caatgccgga actagtggaa ctttcactgt       540
     tccgaggata aagtcattta ctgataagat gattttacca agaattaagg gaaaaactgt       600
     ccttaattta aatcatcttc ttcagtataa tccgcaacaa attgacatct caaacactcg       660
     tgccactcaa tctcaattcg aaaagtggta tgagggagtg aggaatgatt atggtcttaa       720
     tgataacgaa atgcaggtga tgttaaatgg tctgatggtt tggtgtatcg aaaatggtac       780
     atctccagac acatctggtg tctgggtaat gatggatggg gaaacccaag tcgattatcc       840
     catcaaacct ttgattgaac atgcaactcc ttcattcagg caaatcatgg ctcacttcag       900
     taacgcggca gaggcataca tcgcgaagag gaatgcaact gagaggtaca tgccgcggta       960
     tggaatcaag aggaatttga ctgacattag tctcgccaga tatgctttcg atttctatga      1020
     ggtgaattca aaaacacctg atagggctcg tgaagctcat atgcagatga aggctgcagc      1080
     gctacgcaat actagtcgca gaatgtttgg aatggacggc agtgtcagta acaaggaaga      1140
     aaacacggag agacacacag tggaagatgt caacagagac atgcactctc tcctgggtat      1200
     gcgcaattga atactcgtgc tggtgtgttc gtcgggcctg gctcgactct gtttcacctt      1260
     ataatactat ataagcatta gaatacagtg tggctgcgcc accgcttcta ttttacagtg      1320
     agggtagccc tccgtgcttt tagtgttatt cgagttctct gagtctccat acagtgtggg      1380
     tggcccacgt gctattcgag cctcttggaa tgagag                                1416
//