ID   AB583215; SV 1; linear; genomic RNA; STD; VRL; 1274 BP.
XX
AC   AB583215;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mz3B.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1274
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 3f2f7ed6a41c2f07097b9f1d28f699e1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1274
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucurbita pepo L."
FT                   /isolate="Mz3B"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Mandalay division"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1189
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTI4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTI4"
FT                   /protein_id="BAJ78608.1"
FT                   /translation="KSELPEHRCEAIMAAMIESWGYEELTDRIRKFYKWVLEQAPYNEL
FT                   ARLGKAPYVSEVGLRRLYTSVRGSSDELEVYLNKYFENQDGNEPELLVYHEAESGKREN
FT                   LSSLAQKHVFYQSKEPTADAGLTTKSDKDKEQKNKKDDQASESETKAVKQDQGERDRDV
FT                   NVGTTGSISVPRIKTFTDKMLLPRIKGKTVLNLDHLLQYNPKQIDISNTRATQSQFERW
FT                   YEGVKDDYGLNDSEMPVMLNGLMVWCIENGTSPDISGVWVMMDGDNQVDYPIKPLIEHA
FT                   TPSFRQVMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDMSLARYAFDFYEINSKTPD
FT                   RAREAHMQMKAAALRNANRRLFGIDGSVSNKEENTERHTVDDVERDMHSLLGMRK"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1186
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1190..>1274
XX
SQ   Sequence 1274 BP; 408 A; 248 C; 309 G; 309 T; 0 other;
     caaatcggaa ttgcctgaac ataggtgcga agcaatcatg gcagcaatga ttgaatcctg        60
     gggttatgaa gagctcactg atagaatcag aaagttctat aagtgggtgc ttgagcaagc       120
     accttataat gagttggccc gtcttggaaa agctccatac gtgtctgaag ttggtttgcg       180
     caggttatac actagcgttc gtggcagcag tgacgaactc gaagtttacc tgaataaata       240
     cttcgagaac caggatggga atgaaccaga gttactcgtg taccatgaag ctgagagcgg       300
     aaagcgagaa aacttatcat cattggctca gaaacatgtg ttttaccaat ctaaagagcc       360
     aaccgctgat gcaggtttaa caacgaaatc tgataaggat aaagagcaga aaaataagaa       420
     agacgaccaa gccagcgagt ctgaaacaaa agctgtgaaa caagatcaag gagagaggga       480
     tagagatgtc aacgtaggca ctactgggag tatttctgtt cccagaatca aaacatttac       540
     tgataaaatg ttgttgccta gaattaaggg aaagactgtc cttaatttgg atcatctgct       600
     tcagtataat ccgaagcaaa ttgacatttc taacactcga gccacgcaaa gtcaatttga       660
     gcgatggtat gaaggcgtta aggatgatta tggtctcaat gactctgaaa tgccagtaat       720
     gttgaacgga ctcatggttt ggtgcatcga gaacggaact tcaccagaca tatctggagt       780
     ctgggtcatg atggatggag ataaccaagt tgactatccg atcaaacctt tgattgaaca       840
     cgccacgcct tcatttagac aagtgatggc tcactttagt aacgcggcag aagcttacat       900
     agcaaaacgg aatgcaactg aaagatacat gcctcgttac ggactgaaga gaaatttgac       960
     tgacatgagc ctcgccagat atgcttttga tttctatgaa atcaattcca agacgcctga      1020
     ccgtgctcgg gaagcacaca tgcagatgaa ggctgctgcc cttcgcaacg cgaatcggcg      1080
     actgtttgga attgacggca gtgtcagtaa caaggaagag aacacggaaa gacacacagt      1140
     ggacgatgtc gaacgcgaca tgcattcact ccttggaatg cgaaagtgat gtctgttgct      1200
     aaagagcact gtagttcccc ttataatata ggtaacctta aatcgtagtg tggattacca      1260
     ccgtatttat gttt                                                        1274
//