ID   AB583213; SV 1; linear; genomic RNA; STD; VRL; 1388 BP.
XX
AC   AB583213;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Msg.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1388
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 02180e3e27cec3d3ef08d72274912141.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1388
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Trichosanthes anguina L."
FT                   /isolate="Msg"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Bago division"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1198
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTJ2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTJ2"
FT                   /protein_id="BAJ78606.1"
FT                   /translation="KSQLPEHRLEAIMAAIIESWGYEELTDQIRKFYQWVLEQAPYNEL
FT                   ARQGKAPYVSEVGLRRLYTSQRGRSEELEVYLNKYFEDQTGEAPELLVYHEARGTVKQS
FT                   CASIVHKNVFYQSKDGTQDAGLTAKKEKEEKEKERKQEEVNSGKGKEKVETSSHQGDKD
FT                   RDVNVGTTGSFTVPRIKSFTDKMILPRFKKKVVLNLDHLLQYNPKQVDISNTRATQSQF
FT                   DKWYEGVQTDYGLTDSEMAVMLNGLMVWCIENGSSPDISGVWVMMDGDTQVDYPVKPLI
FT                   EHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDMSLARYAFDFYEINSK
FT                   TPDRAREAHMQMKAAALRSANRRLFGIDGSVSNKEENTERHTVEDVDRDMHTLLGMRK"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1195
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1199..1388
XX
SQ   Sequence 1388 BP; 438 A; 267 C; 337 G; 346 T; 0 other;
     caagtctcag ttacctgaac atagacttga ggcaatcatg gcggctataa ttgagtcttg        60
     gggttatgag gagctgacgg atcagatacg caagttctac cagtgggttc ttgagcaagc       120
     gccttacaat gaattagcaa gacaaggaaa agcaccatat gtttctgaag tcggtttaag       180
     aagactatac acaagccagc gtgggagaag cgaggaactt gaggtttacc tcaataagta       240
     ttttgaagac caaacgggcg aagctcctga actgcttgtg tatcatgaag ctcgtggaac       300
     agtcaagcaa agttgtgcat caatcgttca taagaacgtg ttttaccaat caaaagatgg       360
     cacacaagat gcaggtttaa ctgcaaagaa agaaaaagaa gaaaaagaaa aagaaagaaa       420
     acaagaagaa gttaactctg gaaaaggaaa ggagaaagtt gagacttctt ctcatcaagg       480
     agacaaggat agagatgtca acgttggcac tactgggagt tttactgttc ctagaatcaa       540
     gtcattcaca gataagatga tattgccaag attcaaaaag aaggttgtac ttaatttaga       600
     tcatctgttg cagtacaacc cgaagcaggt ggacatctct aacacacgag ccacgcagag       660
     ccagtttgac aagtggtatg aaggagttca gactgattat ggactcacgg attctgaaat       720
     ggcagtcatg ctcaatggac taatggtttg gtgcatcgaa aacggttcat ccccagacat       780
     atctggtgtc tgggtcatga tggatggaga cacacaagtc gactatccag taaagccact       840
     gattgaacac gccacgccat ccttcagaca aattatggct cactttagca atgcagctga       900
     agcttacatt gctaaacgaa atgcaactga gaggtatatg ccccggtatg gcttgaagag       960
     gaatttgact gacatgagcc tcgctcgtta tgcttttgat ttctacgaaa tcaattcaaa      1020
     aacaccagac agagctcggg aagcgcacat gcaaatgaaa gctgctgcac tcagaagcgc      1080
     aaatagacgt ctgtttggta ttgacggtag tgtcagtaac aaggaagaga acactgagag      1140
     gcacactgtt gaagatgttg atcgtgacat gcatactctc cttggtatgc gcaagtgaac      1200
     gcctcattcg taactgttac gctttagttc cccttataat ataagttacc ttagattgta      1260
     gtgtggaata ccaccgtatc tatgtttcag tgagggtggc cctccgtgtt gcttatatta      1320
     ttcgagttct ctgagcctca gtacagtgtg ggtggcccac gagttatgtg agtctcttgg      1380
     aatgagag                                                               1388
//