ID   AB583209; SV 1; linear; genomic RNA; STD; VRL; 1416 BP.
XX
AC   AB583209;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mcu11.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1416
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 4a2febcf00b7072270ea0ac012073b53.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1416
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucumis sativus L."
FT                   /isolate="Mcu11"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Mandalay division"
FT                   /collection_date="Mar-2009"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1210
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTI7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTI7"
FT                   /protein_id="BAJ78602.1"
FT                   /translation="KSKLPEHRLEAITAAMIESWGYGELTHQIRRFYQWVLEQAPFNEL
FT                   ARQGRAPYVSEVGLRRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESKSSDDYQ
FT                   LVWHTNQHVYHQAKSEAVDAGLNEKLKEKEKEEEKEEKDKKKNKQDTSDGNDVSTSTKT
FT                   GERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRAT
FT                   QSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGDTQVDYPI
FT                   KPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYE
FT                   VNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLG
FT                   MRN"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1207
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1211..1416
XX
SQ   Sequence 1416 BP; 446 A; 260 C; 357 G; 353 T; 0 other;
     taaatcgaaa ctcccagaac atcggctgga ggcaataaca gcagcaatga ttgaatcatg        60
     gggctatggg gagctaacgc accaaatccg gagattttat caatgggttc tcgaacaggc       120
     tccattcaat gaactggcta ggcaagggag agccccatat gtttctgagg ttgggctaag       180
     aagattgtac actagtgagc gtggctcgat ggatgagttg gaagcttaca ttgacaaata       240
     cttcgaacgc gaacgagggg actctcctga attactggtg taccatgaat caaagagctc       300
     agatgattat caattggttt ggcatacaaa tcaacatgtc tatcatcaag caaagagtga       360
     ggcagtggat gccggcctca atgagaaatt gaaggagaaa gagaaggaag aagaaaaaga       420
     agagaaagat aagaagaaaa ataagcaaga tactagtgac ggaaatgatg tgtcaactag       480
     tacaaaaact ggagagagag atagagatgt caatgctgga actagtggca cgttcacagt       540
     tccgagaatt aagtcattta ctgataagat gattttgcca cgtattaagg gaaaaactgt       600
     ccttaatctg aatcaccttc ttcagtataa tccacagcag attgacatct caaacactcg       660
     tgccacacaa tcacaatttg agaagtggta tgagggagtg aggaatgatt atggtcttaa       720
     tgacaacgag atgcaagtaa tgttgaacgg tttgatggtt tggtgtatcg aaaatggtac       780
     atcgccagac atatctggtg tctgggttat gatggatggt gacactcagg ttgactatcc       840
     aataaaaccg ttaattgaac acgcaactcc gtcatttagg caaatcatgg ctcacttcag       900
     taacgcggca gaagcatata tcgcgaagag aaatgcaact gagaggtaca tgccgcggta       960
     tgggatcaag agaaatttga ctgacataag cctcgctaga tatgcttttg atttctatga      1020
     ggttaattcg aaaacacctg atagagctcg agaggcacat atgcagatga aagctgctgc      1080
     cctgcgaaac actaatcgca ggatgtttgg aatggacggc agtgtcagta acaaggaaga      1140
     aaacacggag aggcacacag tggaagatgt caatagagac atgcactctc tcctgggtat      1200
     gcgcaattga atactcgcgc ctgtgtgttt gtcgggcctg gctcgactct gtttcacctt      1260
     atagtactat ataagcatta gaatacagtg tggttttacc accgcttcta ttttatagtg      1320
     agggtggccc tccgtgcttt tagtattatt cgagttctct gagtctctat acagtgtggg      1380
     tagcccacgt gctattcgag cctcttagaa tgagag                                1416
//