ID   AB583206; SV 1; linear; genomic RNA; STD; VRL; 1420 BP.
XX
AC   AB583206;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mz4.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1420
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 7b8cb8a79919ade75a960fbc7be5af11.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1420
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucurbita pepo L."
FT                   /isolate="Mz4"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Mandalay division"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1234
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTJ4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTJ4"
FT                   /protein_id="BAJ78599.1"
FT                   /translation="KSKLPEHRLEAIMAAIIESWGYEELTDQIRKFYQWVLEQAPYNEL
FT                   AKQGKAPYVSELGLRRLYTSARGSCAELEVYLSKYFEDESGDTPELVVYHESVGPVKQT
FT                   ITSLQSKNVFYQSKDGAVDAGVNAKLKEKEEKEKKKEKEKEREKEKEKEKLKNVPETSN
FT                   QDTESIAERERDRDVNAGTVGSFTVPRIKTFTDKMVLPKFRGKTVLNLNHLLQYNPLQF
FT                   DISNTRATRSQFDKWYEGVRNDYGLDDNEMAVMLNGLMVWCIENGTSPDVSGVWVMMDG
FT                   DTQVDYPIKPLIEHATPTFRQIMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDISLA
FT                   RYAFDFYEINSKTPDRAREAHMQMKAAALRNANRRLFGIDGSVSNREENTERHTVEDVE
FT                   RDMHSLLGMRK"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1231
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1235..1420
XX
SQ   Sequence 1420 BP; 441 A; 278 C; 353 G; 348 T; 0 other;
     caagtctaag ctacctgagc atagactaga agcgataatg gcagccatca ttgaatcatg        60
     gggctatgaa gagcttacag atcaaattcg gaaattctac cagtgggttc tagaacaagc       120
     tccatacaat gaactcgcga agcaaggtaa agcaccgtac gtctctgaac ttggccttcg       180
     gagattatac actagtgctc gcggatcctg tgcagagctg gaagtgtatc tttcgaagta       240
     ttttgaagat gaaagcggag acacaccaga gcttgtggtt tatcacgaat ctgtgggtcc       300
     agttaagcag accattacct ctttgcaaag caagaacgta ttctatcaat caaaggatgg       360
     cgccgtggat gctggggtta atgctaaact aaaggagaaa gaggagaaag aaaaaaaaaa       420
     agaaaaggag aaagaaagag aaaaagagaa ggaaaaagaa aagctgaaga acgtgcctga       480
     aacatctaat caggacacgg aatcaatagc agaaagggag agagatcgag atgtcaatgc       540
     tgggacagtg gggagtttta ctgttccccg gattaaaaca tttactgaca aaatggttct       600
     acctaagttc agaggaaaga ctgttttgaa cttgaatcat ttacttcagt ataatccatt       660
     acagtttgac atttcaaaca cgcgtgccac tcggagtcag ttcgataaat ggtacgaagg       720
     tgtgcgcaat gattatggcc ttgatgacaa tgagatggca gtaatgttaa atggcttgat       780
     ggtttggtgt attgaaaacg gcacatcacc agatgtgtcc ggcgtctggg tgatgatgga       840
     cggtgatact caagttgact atcccatcaa accattaatt gaacatgcaa caccaacatt       900
     tcgccaaatc atggcgcatt ttagcaatgc agccgaggct tacattgcaa agagaaatgc       960
     aacggagcga tatatgcctc gttatggctt aaagcgaaat ttgactgaca taagcctcgc      1020
     cagatatgcc ttcgatttct atgaaataaa ctcaaagact cctgatcgag ctcgtgaggc      1080
     acatatgcag atgaaggcag cggcactccg caacgccaac aggcgtttat ttggaattga      1140
     cggtagcgtc agtaacaggg aagagaacac ggagagacac actgttgagg atgtcgaacg      1200
     cgacatgcac tctctccttg gaatgcgcaa gtgatgtcgg ctaggcctgg cttagccgtg      1260
     ttccccctat agtataagta accgtaccta atagtgtggt cttaccaccg tatttacgtt      1320
     tagtgagggt ggccctcctt gttgcttata ttattcgagt tctttaagct ttgctccagt      1380
     gtgggtgtcc cacgagtgct cagatctttt agaatgagag                            1420
//