ID   AB583205; SV 1; linear; genomic RNA; STD; VRL; 1415 BP.
XX
AC   AB583205;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mp5.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1415
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 3fb5c4638c6a7e44d15f78ff839f9226.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1415
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucurbita moschata Duch. ex Lam."
FT                   /isolate="Mp5"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Shan state"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1228
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTI2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTI2"
FT                   /protein_id="BAJ78598.1"
FT                   /translation="KSKLPEHRLEAIMAAIIESWGYEELTDQIRKFYQWVLEQAPYNEL
FT                   AKQGKAPYVSELGLRRLYTSTRGSCAELEVYLSKYFEDESGDTPELVVYHESVGPNKQT
FT                   IASLQSKNVFYQSKDGAVDAGVNAKLKEKEEKEKEKEKEKEKEKEKEKEKDVPETSNQD
FT                   TKSEKERERDRDVNAGTIGSFTVPRIKTFTDKMILPKFKGKTVLNLNHLIQYNPQQIDI
FT                   SNTRATQSQFDKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDASGVWVMMDGET
FT                   QVDYPIKPLIEHATPTFRQIMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDISLARY
FT                   AFDFYEINSKTPDRAREAHMQMKAAALRNANRRLFGIDGSVSNREENTERHTVEDVDRD
FT                   MHSLLGMRK"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1225
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1229..1415
XX
SQ   Sequence 1415 BP; 456 A; 265 C; 340 G; 354 T; 0 other;
     caagtctaag ctacctgagc atagactaga agcgataatg gcagctatta ttgaatcatg        60
     gggttatgag gagctaacag atcaaattcg gaaattctac caatgggttc tagaacaagc       120
     tccatacaat gagcttgcga agcaaggtaa agcaccgtac gtttctgaac ttggccttcg       180
     gagattatac actagtactc gcggttcctg tgcagagttg gaagtgtatc tctcgaaata       240
     ttttgaggac gaaagtggag acacaccaga acttgtagtt tatcacgaat ctgtgggccc       300
     aaataagcag accatcgctt ctttacaaag caagaacgta ttctatcaat caaaggatgg       360
     cgctgtggat gctggagtta atgctaaatt gaaagaaaaa gaggagaaag agaaagaaaa       420
     agaaaaggag aaggaaaaag aaaaggaaaa ggaaaaagag aaagacgtgc ctgaaacatc       480
     taatcaggat acgaaatctg agaaagaaag ggagagagat cgagatgtca atgctgggac       540
     aatagggagt ttcactgttc cccgaattaa aacatttact gataagatga ttctacctaa       600
     gttcaaagga aaaactgttt tgaacctaaa ccatctaatt cagtataacc cacaacagat       660
     tgacatttca aacacgcgtg ccactcagag tcagtttgat aaatggtacg aaggtgtgcg       720
     caatgattat ggtcttaatg acaacgagat gcaagtaatg ttaaatggtt taatggtttg       780
     gtgtattgag aatggtactt caccagatgc gtctggcgtc tgggtaatga tggatggcga       840
     gactcaagtc gactatccta ttaaaccatt gattgaacac gcaacaccaa catttcgtca       900
     aatcatggcg cactttagca atgcagctga ggcatacatc gcaaaaagga acgcaacaga       960
     acgatacatg cctcgttatg gcttgaagcg aaatttgact gacataagcc tcgctagata      1020
     tgccttcgac ttttatgaaa taaactcaaa gactcctgac cgagctcgtg aggcacatat      1080
     gcagatgaag gcagcggcac tccgcaacgc caacaggcgt ttatttggaa ttgacggtag      1140
     cgtcagtaac agggaagaga acacggagag acacactgtt gaggatgtcg atcgcgacat      1200
     gcactctctc cttggaatgc gcaagtgatg ttggttaggc gtagcttagc cgtgttcccc      1260
     ctatagtata agtaaccgta tctaatagtg tggttttacc accgtattta cgatttagtg      1320
     agggtggccc tccttgttgc ttgtattatt cgagttctct aagctttgtt ccagtgtggg      1380
     tgtcccacgt gtgttcaaat cttttagaat gagag                                 1415
//