ID   AB583203; SV 1; linear; genomic RNA; STD; VRL; 1421 BP.
XX
AC   AB583203;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mp1.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1421
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 8dc59f270424550c5f80e5ab2c1c8982.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1421
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucurbita moschata Duch. ex Lam."
FT                   /isolate="Mp1"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Mandalay division"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1234
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTJ0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTJ0"
FT                   /protein_id="BAJ78596.1"
FT                   /translation="KSKLPEHRLEAIMAAIIESWGYEELTDQIRKFYQWVLEQAPYNEL
FT                   AKQGKAPYVSELGLRRLYTSTRGSCAELEVYLSKYFEDESGDTPELVVYHESVGPVKQT
FT                   ITSLQGKNVFYQSKDGAVDAGANTKLKEKEEKEKEKEKEKEKEEEREKEKLKDVPETSN
FT                   QKTESKTERERDRDVNAGTMGSFTVPRIKTFTDKMILPKFRGKTVLNLNHLIQYNPQQI
FT                   DISNTRATQSQFDKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDVSGVWVMMDG
FT                   DTQVDYPIKPLIEHATPTFRQIMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDISLA
FT                   RYAFDFYEINSKTPDRAREAHMQMKAAALRNANRRLFGIDGSVSNREENTERHTVEDVD
FT                   RDMHSLLGMRK"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1231
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1235..1421
XX
SQ   Sequence 1421 BP; 453 A; 273 C; 347 G; 348 T; 0 other;
     taagtctaag ctacctgagc atagactcga agcgataatg gcagccatca ttgaatcatg        60
     gggttatgag gaacttacag atcaaattcg aaagttttat cagtgggttt tggaacaagc       120
     tccatacaac gaactcgcga agcaaggtaa agcaccatac gtctctgaac taggtcttcg       180
     gaggttatac actagcactc gcggatcctg tgcagagttg gaagtgtatc tttcgaaata       240
     ttttgaagac gagagcggag acacaccaga gcttgtagtc tatcacgaat ctgtgggtcc       300
     agttaagcaa accattacct ctttgcaagg caagaatgtg ttctaccaat cgaaggatgg       360
     tgctgtggat gctggagcta atactaagct gaaggaaaaa gaggaaaaag aaaaagaaaa       420
     agaaaaagag aaagagaaag aagaagaaag ggaaaaagaa aaactgaaag acgtgcctga       480
     aacatctaat cagaagacgg aatcgaagac agaaagggag agagatcgag atgtcaatgc       540
     tggaacaatg gggagtttta ctgttcctcg aattaaaaca tttactgata aaatgatttt       600
     acccaagttc agaggaaaaa ctgtcctgaa tttgaatcat ttaattcagt acaatccaca       660
     acagattgac atttcaaaca cgcgtgccac tcagagtcag tttgacaagt ggtacgaagg       720
     tgtgcgcaat gattatggtc tcaatgacaa tgaaatgcaa gtgatgttaa atggactaat       780
     ggtttggtgt atcgagaatg gtacatcacc agatgtatcc ggcgtctggg ttatgatgga       840
     tggtgacacg caagtcgact atcctatcaa accattaatt gaacatgcaa caccaacatt       900
     tcgccaaatc atggcgcatt ttagcaacgc ggctgaggca tacattgcaa agagaaatgc       960
     aacggagcga tacatgcctc gttatggttt gaagcggaat ttgactgaca taagcctcgc      1020
     cagatacgcc ttcgactttt atgaaataaa ctcaaagact cctgatcgag ctcgtgaggc      1080
     acatatgcag atgaaggcag cggcacttcg caacgctaac aggcgtttat ttggaattga      1140
     cggtagcgtc agtaacaggg aagagaacac ggagagacac actgttgagg atgtcgaccg      1200
     cgacatgcac tctctccttg gaatgcgcaa gtgatgttgg ctaagcctgg cttagccgtg      1260
     ttccccctat agtataagta accgtatcta gtagcgtggt atcaccaccg tatttacgtt      1320
     ctagtgaggg tggccctcct tgttgcttat attattcgag ttctctaagc tttgttccag      1380
     tgtgggtgtc ccacgtgtgc tcaaatcttt tagaatgaga g                          1421
//