ID   AB569999; SV 1; linear; genomic RNA; STD; VRL; 1719 BP.
XX
AC   AB569999;
XX
DT   07-FEB-2013 (Rel. 115, Created)
DT   07-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Rosellinia necatrix partitivirus 2 D-RdRp gene for defective RNA-dependent
DE   RNA polymerase, complete cds.
XX
KW   .
XX
OS   Rosellinia necatrix partitivirus 2
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1719
RA   Suzuki N., Kondo H.;
RT   ;
RL   Submitted (28-JUN-2010) to the INSDC.
RL   Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and
RL   Resources; Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan
XX
RN   [2]
RC   DOI:10.1128/JVI.02835-12
RX   DOI; 10.1128/JVI.02835-12.
RX   PUBMED; 23236074.
RA   Chiba S., Lin Y., Kondo H., Kanematsu S., Suzuki N.;
RT   "Effects of Defective Interfering RNA on Symptom Induction by, and
RT   Replication of, a Novel Partitivirus from a Phytopathogenic Fungus,
RT   Rosellinia necatrix";
RL   J. Virol. 87(4):2330-2341(2013).
XX
DR   MD5; 9cfbd2979740c53ebc65f3666138b787.
DR   EuropePMC; PMC3571465; 23236074.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1719
FT                   /organism="Rosellinia necatrix partitivirus 2"
FT                   /segment="DI-dsRNA1"
FT                   /strain="W57"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Ibaraki"
FT                   /isolation_source="Rosellinia necatrix (plant pathogenic
FT                   filamentous ascomycete)"
FT                   /db_xref="taxon:859651"
FT   CDS             84..905
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="D-RdRp"
FT                   /product="defective RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:L8B8K8"
FT                   /db_xref="UniProtKB/TrEMBL:L8B8K8"
FT                   /protein_id="BAM78603.1"
FT                   /translation="MKNITDLPFPSKGVPQFRDALPIHGRDPEVPNPVTDASNRIIDFA
FT                   LRKHLTSDEFDQVVNGYRRSPWNEDALNKDIEKLDSDEHTVIKDQHYENAIQHVQKLLT
FT                   PEKPLQPVHFADLRRYKWRLSTNIGAPFASSKHWQDYVKAKFNHFRDGTPFENIAHRDL
FT                   FVEAHKDSQPLEITDARMTKHNLYTEAFYVSRETIHRIKDGETTDRYGNDARYWNTAFA
FT                   RQHLVKADEDDKVRLVFWRSLFFTMCRTHVHMASLYFPPLPDGELLIYGIG"
XX
SQ   Sequence 1719 BP; 498 A; 466 C; 302 G; 453 T; 0 other;
     agataagttc tttgaaccgt ctaacccacg ctcttcaaag tttcaaccct tcaaaacttc        60
     gcactcacag aaccttactg acgatgaaga acatcactga cctgcccttc ccctcgaaag       120
     gcgtcccaca atttcgcgac gctcttccga tccacggacg agaccctgaa gttccgaacc       180
     ctgttactga cgcttcgaat cgaattatcg acttcgcgct cagaaagcac ctcacatccg       240
     atgagtttga ccaagttgtc aacggctatc gacgttcccc ctggaatgaa gacgctctca       300
     acaaagacat cgagaaactt gactctgatg aacacactgt catcaaagat caacactacg       360
     agaatgcaat ccaacacgtt cagaagctcc tcaccccaga gaagcccctt caacccgttc       420
     atttcgcaga tctacgcaga tacaaatgga gactctccac taatatcggc gcacccttcg       480
     cttcatcaaa acactggcaa gattacgtaa aagctaagtt caatcacttt cgtgatggaa       540
     caccctttga gaatatcgca caccgcgatc ttttcgtcga ggcacacaaa gactctcaac       600
     cacttgagat caccgacgcc cgtatgacga aacacaatct ctataccgaa gctttctacg       660
     tttcccgaga aaccattcac cgcatcaaag atggtgagac caccgaccgg tacggcaacg       720
     acgcccgcta ctggaacacc gcattcgcga gacaacacct cgtaaaagca gacgaagacg       780
     acaaagttcg tttagttttt tggcgctccc ttttctttac tatgtgcaga actcatgttc       840
     atatggcctc tctttatttt cctcctctcc ctgatggaga attactaatt tatggaattg       900
     gatgaccgac gctatccttt ccactccctt gctccttcct aacggaagat tcatccgctt       960
     caatcactct ggaatttatt ccggatactt tcagacacag attttagact ctatctataa      1020
     tctagtcatg atctttacta ttctatcaag aatgagattt gatcttgaca aatgtgttat      1080
     taaagtccaa ggcgatgact caatcttcat gttactctgt tgtttcatta tgatttccac      1140
     ctcttttttt acgctcttta aatattatgc agaatactat tttggcgcaa aactcaatga      1200
     gaagaagtcc gagataagac cctcgctcca agacgcagaa gtactgaagt atcgaaaccg      1260
     caacggtatt ccctaccgtg accggatttc actactagca cagctacgac atcctgaacg      1320
     acgcactgac gttgattctg tcgcagttcg ttgcattggt attgcttacg cagcctgtgg      1380
     ccaagacgct acagtgtacc tcatttgcga agatatttac agctatctcg taaagaagta      1440
     cgacgctcac gcacgccaag gagaactaga tttcatgttt cgacatctcg aacttcatga      1500
     tactgttccc tccgccgcaa cattcccaag ctggtttgat accatggcac atctgactga      1560
     tggaccgcgg gaccctgtcc ccttccattg gccaacagac tattttattg gtctgcctgg      1620
     tcgtctctag aatgagacga gttttatgtt taattttaac atatgtttct aaaacaaaaa      1680
     aaaaaaaaaa aaaaaaacac aaaacccaaa aaaaaatgt                             1719
//