ID   AB569998; SV 1; linear; genomic RNA; STD; VRL; 1828 BP.
XX
AC   AB569998;
XX
DT   20-JUL-2011 (Rel. 109, Created)
DT   07-FEB-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Rosellinia necatrix partitivirus 2 CP gene for capsid protein, complete
DE   cds.
XX
KW   .
XX
OS   Rosellinia necatrix partitivirus 2
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1828
RA   Suzuki N., Kondo H.;
RT   ;
RL   Submitted (28-JUN-2010) to the INSDC.
RL   Contact:Nobuhiro Suzuki Okayama University, Institute of Plant Science and
RL   Resources; Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan
XX
RN   [2]
RX   DOI; 10.1371/journal.ppat.1002146.
RX   PUBMED; 21779172.
RA   Chiba S., Kondo H., Tani A., Saisho D., Sakamoto W., Kanematsu S.,
RA   Suzuki N.;
RT   "Widespread endogenization of genome sequences of non-retroviral RNA
RT   viruses into plant genomes";
RL   PLoS Pathog. 7(7):e1002146-e1002146(2011).
XX
RN   [3]
RC   DOI:10.1128/JVI.02835-12
RX   DOI; 10.1128/JVI.02835-12.
RX   PUBMED; 23236074.
RA   Chiba S., Lin Y., Kondo H., Kanematsu S., Suzuki N.;
RT   "Effects of Defective Interfering RNA on Symptom Induction by, and
RT   Replication of, a Novel Partitivirus from a Phytopathogenic Fungus,
RT   Rosellinia necatrix";
RL   J. Virol. 87(4):2330-2341(2013).
XX
DR   MD5; 006e73598429c937b0b8ed83c8174ea0.
DR   EuropePMC; PMC3136472; 21779172.
DR   EuropePMC; PMC3571465; 23236074.
DR   EuropePMC; PMC5874917; 29559577.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1828
FT                   /organism="Rosellinia necatrix partitivirus 2"
FT                   /segment="dsRNA2"
FT                   /strain="W57"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Ibaraki"
FT                   /isolation_source="Rosellinia necatrix (plant pathogenic
FT                   filamentous ascomycete)"
FT                   /db_xref="taxon:859651"
FT   CDS             105..1556
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:F8WL22"
FT                   /protein_id="BAK53192.1"
FT                   /translation="MSTPSVTLSAFKAAVAKSGLEDQFLKLTGLTSMDELSADNFNEKF
FT                   GQADSLTKSILAPSAAPVPHQEQKKEDADAKRVSAPVSASDFLYGFKHMTIQYASRKKN
FT                   NTFLPSAFMMMYIIHEMNVLLCEHFYFKREAPNYHPLLLRTYFGILFIIQTLRAQHAAN
FT                   NLFGDQFEFLEKFLDAYPVDTLPIPAPLIHIFKSLCSSRPEIPQYGYVTPFVPEELWGT
FT                   QLKDSPANALYARNFFPNIPYILSLYATLNSSTIKGSVKEMNSYLGNGTDDRTFAGHAY
FT                   DKDPAQWTEERAFFLRSPGMEHALEGTSSFNKDFFENRFDNLEVPIPSTNDKVKFVDQF
FT                   CYLSKNLAWFRDLVEIASAAAKFFEGSGTLADCSPVGPPVCQVQTTISNVDLHTAPTSI
FT                   SKGKSFYAEAHMKLTTTSRTMDQLSMIMASASHLNLRYAHATHSIQSRTSGPFWSLNPI
FT                   ESSVTDESSLIQVRQTVKKMMKSKV"
XX
SQ   Sequence 1828 BP; 500 A; 554 C; 304 G; 470 T; 0 other;
     agataagttc ttcgagcaag tctaaccagc ctctactcaa gtttcaaccc atcaaaactt        60
     cgcactcacc cgccccctag caatctctgc tccgttcaac caagatgtcg accccctccg       120
     tcactctctc cgctttcaag gccgccgtcg ccaaatccgg tctcgaggat caattcctca       180
     aacttaccgg ccttacgtcg atggatgaac tctccgctga taacttcaac gagaagttcg       240
     gtcaagccga ttcgctcacc aagagcatcc tcgctccgtc cgccgcccct gttccccacc       300
     aagaacagaa gaaagaagat gctgatgcca aaagagtctc cgcacccgtc tccgcgtctg       360
     acttcctata tggtttcaag cacatgacaa tccaatacgc ctcaaggaag aagaataaca       420
     ccttcctccc ctccgccttc atgatgatgt atatcattca tgagatgaac gtcctccttt       480
     gcgagcactt ctactttaaa agagaagctc caaactacca cccgctcctt ctccgcacgt       540
     atttcggtat tctatttatc atccagaccc tccgcgctca acacgccgcc aacaatttgt       600
     tcggcgatca attcgaattc ctcgaaaagt ttctagatgc ataccccgtc gatactcttc       660
     ctatccccgc ccccctcatt catattttca aatctctttg ctcctctcgc cccgagatcc       720
     cccagtatgg ctatgtcaca cctttcgttc ccgaagaact ttggggtacc caactcaaag       780
     attctcctgc caatgcactc tatgcaagga acttcttccc caacatccct tatatcttgt       840
     cgctgtacgc taccctcaac agcagcacta tcaaaggatc agtcaaggaa atgaactcct       900
     acctcggcaa tggaactgac gaccgcactt ttgctggtca cgcctacgac aaggaccccg       960
     ctcaatggac tgaagaacgc gctttcttcc tccgctctcc cggaatggaa cacgctctcg      1020
     aaggtacctc atccttcaac aaggatttct tcgaaaaccg atttgataat ttggaagtcc      1080
     ccatccccag cactaacgat aaagtcaagt tcgttgacca attctgctat ctctctaaga      1140
     acctcgcctg gttccgtgat ctcgttgaga tcgcctccgc cgccgctaag ttcttcgaag      1200
     gatcaggcac tctcgctgac tgctccccag tcggaccccc agtatgccaa gtccaaacga      1260
     cgatcagcaa tgtcgacctt cacactgccc ccacttcaat tagtaagggt aaatcgtttt      1320
     acgctgaagc tcacatgaag ctgaccacca cgtcacggac catggatcaa ctatccatga      1380
     tcatggcaag tgcttcgcac ttgaatctta ggtacgctca cgcaacccat agtattcagt      1440
     cgcgaacctc aggtcccttc tggtctctca atcctattga gagctctgtc acagatgagt      1500
     cctccctgat tcaagtcagg cagaccgtca agaaaatgat gaagtctaag gtctaagaca      1560
     cctcttcaat cgtttgctac ctcgcgtccc ccccagaatg tttttttctt ttgtacaatc      1620
     tacaattgcg ctgttttctt tttctcgaaa aaaaaaaaaa aatcacaaaa ggctaacgcc      1680
     acaaaattca aaaaaaagtt ctctttgaac ctctgtcttg cgattttgtt tctttttttg      1740
     agttccgttt tgttacgaaa cttatttatt ttttaaaaaa aaaaaaaaaa aaaaaaaaaa      1800
     aaaaacaaaa aaaaaaaaaa aaaaatgt                                         1828
//