ID AB550790; SV 1; linear; genomic RNA; STD; VRL; 6106 BP. XX AC AB550790; XX DT 13-AUG-2010 (Rel. 105, Created) DT 13-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Poinsettia mosaic virus genomic RNA, complete genome, isolate: JO2. XX KW . XX OS Poinsettia mosaic virus OC Viruses; Riboviria; Tymovirales; Tymoviridae. XX RN [1] RP 1-6106 RA Okano Y., Yamaji Y., Oshima K., Namba S.; RT ; RL Submitted (16-MAR-2010) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku 113-8657, Japan XX RN [2] RX DOI; 10.1007/s00705-010-0708-y. RX PUBMED; 20512653. RA Okano Y., Maejima K., Shiraishi T., Hashimoto M., Senshu H., Ozeki J., RA Takahashi S., Komatsu K., Yamaji Y., Namba S.; RT "Genetic heterogeneity found in the replicase gene of poinsettia mosaic RT virus isolates"; RL Arch. Virol. 155(8):1367-1370(2010). XX DR MD5; 3c1a7f1177d85428b5eb141e929f70d9. XX FH Key Location/Qualifiers FH FT source 1..6106 FT /organism="Poinsettia mosaic virus" FT /host="Euphorbia pulcherrima" FT /isolate="JO2" FT /mol_type="genomic RNA" FT /country="Japan" FT /collection_date="2008" FT /db_xref="taxon:113553" FT 5'UTR 1..80 FT CDS 81..6026 FT /codon_start=1 FT /transl_table=1 FT /product="replicase-associated protein" FT /db_xref="GOA:D9N3S4" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008043" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D9N3S4" FT /protein_id="BAJ14669.1" FT /translation="MAFQDAINNLSSTVHRDTVAAPLLESIAQPLRDSLQLYPWAINAE FT KLDLLKKFGISVSGLGHQAHPHPFHKIIETHLLFQHWSHNCREDSTVLFMKPEKFQKLA FT SFNPHFKHLLNYRLHAKDTTRYPETACSLPTTSTVFMHDALMYYKPSQIMDLFLRIPNL FT NNLYASVVVPAESSFTDHSLYPEVYQYKTIRNHLHYVPESNHSSAYNQPADALLWLELS FT TIQGPSFSLTVTRLDSWGPCHSLLIQRGIPPAHVVNDFVSFDVPAAVLLPEATSIRQPT FT RHRLVPQSVYNALFTYTRAVRTLRISDPVGFVRTQSNKPEHAWVTSSAWDNLQHFSLLT FT ASNRPSNSYSWNGSLWQRFISRLQTVVAELKSSAIFTSSITTFLFSLLFQYFRRKSATS FT RSLPSNLGFRSLDEHIKLHEGLLQAGFSYTHTSQTRQGPRDFYHRAAERFKFMSALVRS FT ISFSLPLLAFAIYSKCTQPMPPQSLHDSYHNYHHPSKWVLGWSRRLTVVTPEAFLPFEP FT VPIPAEPIAATMDPGPPPGPVDLASDEKLLWCRQHGVVHGHRHHHNNNGLRIFPCHTYT FT AEGMSIICTDYLPDFSGTEDPGQHQAAHPDDQEAQAEPASLPPLAPVSEPKAAPAQPAE FT PLKVLQPATAKKADPAPPKTRRINTYSLMGADQVYPVDEHGDLLPISHEELSSEISQLM FT VDPTAYGPVQTFAQLYPANYIGTSADFLTRLRNGPPSRVPIPVNQSCLLVAISKATSIS FT LEELWKTLAALLPDSLLLPEDITTRGLSTDHFVVLASAHSLKCIFISGALELELGLHNA FT HHSFTIKHTSSANQLPHFELVADGTRALRGAASDTKELNRAALGFKFKNAFLPFRKVHV FT YTTEPDRAKNLISNMKNGFDGVLANIDPNHPHEARDRLLALDGSIEVHAPRKVSLIHLA FT GFPGCGKTKPIQALLKTSLFADYKVAVPTVELRAEWKADLALKTGQAWRLSTWESSLLK FT TASILVIDEVYKMPRGYVDLAVAADPTVRFVILLGDPLQGEYHSSHPESQNKRLSSEIH FT RLLKYIDCYCLWSHRIPQCVARCFGVESSNEHEGYVGFSSFIAPQDITLACSQSSAKTL FT RDAGYPATTVSSSQGSTYRTPINLLLDRNSRRLSSAVSLVAATRSTMAINMTGDRDVLQ FT QGPHNNPVFSALYNANLISLHSLFPTLFAKLPIIRTAITSRRGMLTGGNISAEDDVIID FT SRRPGPLNAPEVDDTFLPTWRRPLHRNLASAVHSNCPAQSTYVTPATITAVYPGESFEN FT LAAHFLPAHDPEIKEILHRGEFSAQFPILLNQDFSLSAQSSTLIAAKHDSKRDPTLLVA FT SITKRLRFRPSDSSYQLSSKDQILGLTLYHSWCRAYNRHPQAVVPFDELLFAECININE FT FAQLSNKTKSTIIANASRSDPDWRITAVKIFSKTQHKINEASIFGSWKACQTLALMHDY FT VVLFLGPVKKYQRIFDSQERPANVYYHAGHSPLEMSEWAQKHLKSGISHTNDYTAFDQS FT QHGEAVVFEMAKMRRLSIPESLINLHSYLKRNVDTQFGPLTCMRLTGEPGTYDDNTDYN FT LAVIYSKYLVLDHPIMVSGDDSVIGGNPTVSRNWPAIEKLLALRFKTESTKHPLFCGYY FT VGPAGAIRSPITLFAKIMSAVDDLSIDDKLASYLSEFAIGHSLGHDFWDLLPIDQVPYQ FT SAVYDFFCRHASREQKQILNIGEVPDTVLSSIASHLRFASRALYCLLPSSVRRALTSKK FT TVTDAFEDPDVSHMQGELLQNFQESNITKLRGADMSDQVVKQLESNHVDSTPSLIPRPP FT FQGGSRTVPFQTVAMDVVAAGGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAAS FT FQSPITLDLVWSTSNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDS FT VSYVDTPKLTLNASDPTGSGSTATTVATVLVSGKLIVSDALATPTPLE" FT CDS 5451..6026 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /note="putative start site from sg RNA" FT /db_xref="GOA:D9N3S3" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D9N3S3" FT /protein_id="BAJ14670.1" FT /translation="MSDQVVKQLESNHVDSTPSLIPRPPFQGGSRTVPFQTVAMDVVAA FT GGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITLDLVWSTSNVIFTD FT LQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKLTLNASDPTGSG FT STATTVATVLVSGKLIVSDALATPTPLE" XX SQ Sequence 6106 BP; 1314 A; 2092 C; 1310 G; 1390 T; 0 other; ggaaatacac atctccagtc agctccttta cgcaactgac ttttaatcca tcatctgttt 60 gtttgccccc ggtatatccc atggcattcc aagacgctat taacaaccta tccagcaccg 120 tccaccgcga cacggttgcg gcacctctct tagagagcat tgcccaacct ctccgcgact 180 ctcttcaatt atatccctgg gcgatcaacg ccgagaaact tgacctgctg aagaaatttg 240 gcatttctgt ctccggcctg ggtcatcaag cccaccctca tccgttccac aagatcatcg 300 aaacacatct ccttttccaa cattggagcc acaactgtcg agaggactcc acagtgcttt 360 tcatgaagcc cgaaaaattc caaaaactcg cctctttcaa tcctcacttc aagcatcttc 420 tcaattaccg ccttcacgcc aaggacacca cccgctatcc agaaaccgcg tgcagtctcc 480 ccaccacttc caccgtgttc atgcatgacg ccttgatgta ctacaaacct tctcagatca 540 tggatctgtt cctccgcatt ccaaacctca acaacctcta cgcttccgtg gtggttccgg 600 cggagagctc attcaccgac cattccctat accccgaggt ttaccagtat aagactatca 660 ggaaccatct ccactacgtc cctgagtcca atcactcctc ggcttacaat caacctgccg 720 acgcccttct ctggctcgaa ctttcgacca tccaagggcc ctccttctcc ctcaccgtca 780 ctaggctcga ctcttggggc ccgtgtcact cgcttctgat ccaacgcggc ataccaccag 840 cccacgttgt caatgacttc gtcagcttcg acgtgccagc cgccgttctt cttcccgagg 900 ccaccagcat tcgtcagccc acccgtcatc gcctagtgcc tcaatccgtg tacaatgcac 960 tgtttactta cactcgagcc gttcggactc tgcgcatctc cgatccagtc ggcttcgttc 1020 gcacacagtc caacaagcca gagcacgcct gggtcacgtc ctccgcctgg gacaatctcc 1080 agcacttttc tctcctcact gcctctaacc gtccttccaa ctcctattcc tggaatggca 1140 gcctctggca gcgcttcatc tctcgcctgc aaacagtggt cgctgagctg aagtcttcag 1200 ccatcttcac ttcctccatc accaccttcc tcttctctct ccttttccag tacttccgtc 1260 gaaaatctgc tacctccagg tctttgccta gcaacctcgg tttccggagt ttggacgagc 1320 acatcaagct ccatgaaggt ctcctccagg ctggttttag ttatacacac acttcccaaa 1380 cccgccaggg gcctcgagat ttctaccaca gggccgctga gcgattcaaa ttcatgtccg 1440 ccctcgttcg ttccatctcc ttctctcttc ccctgctcgc gttcgccatt tactccaagt 1500 gcacgcagcc catgccccct cagagccttc acgattccta ccacaattac catcatccaa 1560 gcaagtgggt ccttggatgg agtcgccggc tcactgtggt cactcccgag gctttcctgc 1620 ctttcgaacc tgttccaatc cctgcggagc caatcgccgc cacaatggac cccgggcccc 1680 ctccagggcc tgttgatctc gcctcagatg agaaactcct ttggtgccgg cagcacggcg 1740 tcgttcacgg ccatcgacat caccataaca ataatggcct ccgtattttc ccttgccaca 1800 cctacaccgc tgaagggatg tccattatct gcaccgatta cctgcctgac ttcagtggaa 1860 cagaggaccc tggccaacac caagccgctc atcctgatga ccaagaggcg caggcggagc 1920 ccgcatcctt gccccctctc gcgcccgtct cagaacccaa ggctgcgcct gctcagcccg 1980 cggagccctt gaaggtcctt cagcctgcca ccgccaagaa ggccgatcca gcacccccaa 2040 aaactcgacg tattaacacc tactctctga tgggggccga ccaagtgtac cccgtcgatg 2100 agcatggtga cctcctccca atctcccacg aggagctgtc ctcggaaatc agccagctta 2160 tggtcgaccc aaccgcttac gggccggttc agaccttcgc acaactctac cccgcgaact 2220 atataggaac ctccgctgac ttcctcactc gcctccgcaa cggcccccca agccgtgtcc 2280 caatcccagt gaaccagagc tgcctcttag tggcaatcag caaagccacc tccatctcgc 2340 tcgaagagtt gtggaagacc ctcgctgccc tcctgcccga ttctctcctg ttgcctgagg 2400 acataacgac ccgcggcctc tccacggacc acttcgtagt cttagcttcc gcccactctt 2460 tgaagtgcat tttcatctct ggggcgctcg agctcgagtt aggcctccac aacgcacacc 2520 actccttcac gatcaagcac acaagctccg ctaatcaact gccacacttc gagctcgtcg 2580 cggatgggac ccgggccctt cgaggcgccg ccagcgatac gaaggaattg aaccgggccg 2640 ccctgggttt caaattcaag aacgccttcc tcccgtttcg caaagtccat gtctacacca 2700 cggaacccga tcgcgccaag aatctcatct cgaacatgaa gaatggcttc gatggtgtcc 2760 tcgccaacat tgacccgaac cacccgcatg aagcccgtga ccgcctcctt gcccttgacg 2820 gcagtattga agtgcacgcc cccagaaagg taagtctgat tcacctagcc gggtttccag 2880 gctgcggaaa gaccaagccc atccaggccc tcctcaagac tagcctgttt gcggattata 2940 aagtggcagt gcccaccgtg gagttgcgcg ccgagtggaa agctgatctg gcgcttaaaa 3000 ccggccaggc ttggagactc tccacttggg agtcgtcctt gctcaagacc gcctctattc 3060 ttgtcattga tgaggtgtac aaaatgcccc gcggttatgt ggatttggcg gtagcagctg 3120 atcctaccgt ccgttttgtc attctcttgg gtgaccccct tcaaggcgag tatcacagct 3180 cccatccgga atcccagaat aagcgactct cttcggagat ccacaggctg ctcaagtaca 3240 tcgactgtta ttgcctctgg tctcaccgaa tccctcaatg cgtcgcccgc tgtttcgggg 3300 ttgagagctc aaacgagcac gaaggttacg tgggcttcag ctcctttatc gcaccccagg 3360 acattaccct cgcttgctcg cagagctcag ccaagacctt gcgcgacgcc ggataccctg 3420 ccaccaccgt cagtagctct caaggttcca cttaccgcac cccaatcaat cttctcctcg 3480 acagaaacag tcgcagactg agcagcgccg tctcgctggt cgccgccact cgttccacca 3540 tggccataaa catgacgggc gatcgggatg ttctacaaca gggcccacac aacaacccgg 3600 tgttctctgc actttacaac gccaatctga tatccctgca cagcctgttc ccaacgcttt 3660 tcgcgaagtt gccgattata cgcaccgcga tcaccagtcg taggggcatg ctgaccggtg 3720 gcaacatctc tgctgaggac gacgttatca ttgattcaag acgtccgggc ccgttgaatg 3780 ccccagaggt cgacgatact ttcctcccga cttggcgacg ccctcttcac cggaatcttg 3840 cctctgctgt tcatagcaat tgcccggccc aatccactta cgtcactccg gccaccatca 3900 ctgcggttta tcctggtgaa tcctttgaga atctcgcagc acatttcctc cccgctcacg 3960 accccgaaat taaggagatc ttgcaccgcg gcgagttcag tgcgcagttt ccgattctcc 4020 tgaaccagga tttctctctc tccgcgcagt cttccacgtt gattgcggcc aagcatgact 4080 ccaagcgcga cccgacgctg ctcgtcgcct ccattaccaa gcgcctccgc ttccgcccga 4140 gcgactcttc gtaccagctc tcctccaagg accaaattct gggcttgacc ctctaccaca 4200 gttggtgccg agcctacaac cgccacccgc aggcagtcgt tccattcgat gagttgctgt 4260 ttgcggagtg catcaacatc aatgagttcg cgcagctctc gaataagacc aagagcacga 4320 tcattgcgaa cgccagccga tcggatcctg attggcgcat cacagccgtg aaaattttca 4380 gcaaaacgca gcacaaaatc aatgaagcct ccatctttgg atcctggaag gcttgtcaga 4440 cgctggctct catgcatgat tatgtcgttc ttttcctggg tccggtcaag aaatatcagc 4500 gcatctttga ctcccaagag cgaccagcca acgtgtatta ccatgctggc cactcccctc 4560 ttgagatgtc cgagtgggcc caaaagcacc tcaaatcagg aatctctcac accaatgact 4620 acacggcttt tgaccaaagc cagcatggcg aggcggtcgt cttcgagatg gccaagatgc 4680 gccgcttgag catccccgag agcctcatca accttcattc gtatctcaag cgcaatgttg 4740 acacccagtt tgggcctcta acgtgcatga gactcaccgg cgaaccaggc acctacgacg 4800 acaacacaga ctacaatctc gcggtcattt acagcaagta tctggtcctc gaccacccaa 4860 tcatggtgtc cggagatgac agcgtaattg gtggaaaccc aacggtgtct cggaactggc 4920 ctgccatcga gaagctgctt gctcttcgct ttaaaacaga aagcaccaaa catcccctgt 4980 tctgcggata ctatgtagga ccagccggcg ccatcaggtc tccaatcacc cttttcgcaa 5040 agatcatgag tgccgttgac gatctctcga tagacgacaa attggcaagt tatctgtctg 5100 agttcgcgat cgggcactct ctcgggcacg acttttggga tcttctgcca attgatcaag 5160 tcccttacca atccgcggtg tatgatttct tctgccggca tgcctcgcgc gaacagaagc 5220 agatcctcaa catcggcgaa gtgcctgaca cagttctatc aagcatagct agtcatctca 5280 ggttcgccag ccgagccctg tattgtctct tgccgtcctc agttcgccgg gctctcacat 5340 ccaagaagac tgtcaccgat gcgtttgaag atcctgacgt ttcgcacatg cagggtgaat 5400 tgcttcagaa cttccaagaa tctaacataa ccaagttacg aggcgcagac atgtcagacc 5460 aagtcgtcaa acagctcgaa tccaaccacg tcgactccac tccatctctc atcccacgcc 5520 cccctttcca aggcggcagt cgcacagtgc ctttccagac tgtcgcaatg gacgtcgtcg 5580 ctgccggcgg caatgcaact ttcaacttag cgggccacgt ctcgctttct gagatcactg 5640 caccgtaccg caaggcgcgt ctggcggaac tcaaagccat cgtctgcccc accgccgcgt 5700 ccttccaatc cccgatcact cttgacctcg tctggagcac cagcaatgtc atattcaccg 5760 acctccagat acttcaggtc tacgggggca cccgctttgc tatcggcggg cccctcctca 5820 gccacacgta tgagctccgc gctgacctca gctacctcaa tcctgtcatc aaggactccg 5880 tctcatacgt ggacaccccg aagctcactc tcaacgcctc tgacccaact gggtctggct 5940 caaccgccac caccgtcgcc accgtgctgg tgagcggcaa gctgatcgtc tccgacgcat 6000 tggccacacc cacacccctc gagtaggtcc cttattcagc aatgttttgg gtagtggagc 6060 cccctagcct ccaccttttc ctttcctctg gcaatagcgc ctaaat 6106 //