ID AB550788; SV 1; linear; genomic RNA; STD; VRL; 6095 BP. XX AC AB550788; XX DT 13-AUG-2010 (Rel. 105, Created) DT 13-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Poinsettia mosaic virus genomic RNA, complete genome, isolate: JN. XX KW . XX OS Poinsettia mosaic virus OC Viruses; Riboviria; Tymovirales; Tymoviridae. XX RN [1] RP 1-6095 RA Okano Y., Yamaji Y., Oshima K., Namba S.; RT ; RL Submitted (16-MAR-2010) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences; Yayoi 1-1-1, Bunkyo-ku 113-8657, Japan XX RN [2] RX DOI; 10.1007/s00705-010-0708-y. RX PUBMED; 20512653. RA Okano Y., Maejima K., Shiraishi T., Hashimoto M., Senshu H., Ozeki J., RA Takahashi S., Komatsu K., Yamaji Y., Namba S.; RT "Genetic heterogeneity found in the replicase gene of poinsettia mosaic RT virus isolates"; RL Arch. Virol. 155(8):1367-1370(2010). XX DR MD5; 869eb556a5a8fc75d0b8d29b2f09ed3f. XX FH Key Location/Qualifiers FH FT source 1..6095 FT /organism="Poinsettia mosaic virus" FT /host="Euphorbia pulcherrima" FT /isolate="JN" FT /mol_type="genomic RNA" FT /country="Japan" FT /collection_date="1987" FT /db_xref="taxon:113553" FT 5'UTR 1..83 FT CDS 84..6044 FT /codon_start=1 FT /transl_table=1 FT /product="replicase-associated protein" FT /db_xref="GOA:D9N3S0" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008043" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D9N3S0" FT /protein_id="BAJ14665.1" FT /translation="MAFQDAINNLSSTVHRDTVAAPLLESIAQPLRDSLQLYPWAINAE FT KLDLLKKFGISVSGLGHQAHPHPFHKIIETHLLFQHWSHNCREDSTVLFMKPEKFQKLA FT SFNPHFKHLLNYRLHAKDTTRYPETACSLPTTSTVFMHDALMYYKPSQIMDLFLRIPNL FT NNLYASVVVPAESSFTDHSLYPEVYQYKTIRSHLHYVPESNHSSAYNQPADALLWLELS FT TIQGPSFSLTVTRLDSWGPCHSLLIQRGIPPAHVVNDFVSFDVPAAVLLPEATSIRQPT FT RHRLVPQSVYNALFTYTRAVRTLRISDPVGFVRTQSNKPEHAWVTSSAWDNLQHFSLLT FT ASNRPSNSYSWNGSLWQRFISRLQTVVAELKSSAIFTSSITTFLFSLLFQYFRRKSATS FT RSLPSDLGFRNLDEHVKLHEGLLQAGFSYTHTSQTRQGPRDFYHRAAERFKFMSALVRS FT ISLSLPLLAFAIYSKCTQPMPPQSLHDSYHNYHHPSKWVLGWSRRLTVVTPEAFLPFEP FT VPIPADQLPPQWTPAPLQSLLISPQMRNSSGAGSTASFTATDITITITASAFSPATPTP FT LKGCPLSAPITCLTSVEQRTLANTKPLILMTKRRRRSRTLAPSRARLRTQGCACSARGA FT LKVLQPATAKKADPAPQKTRRINTYSLMGADQVYPSMSMVTSSQSPTRSCPRKSASLWS FT THRLWAVRLRTLYPANYIGTSADFLTRLRNGPPSRVPIPVNQSCLLVAISKATSISLEE FT LWKTLAALLPDSLLLPEDITTRGLSTDHFVVLASAHSLKCIFISGALELELGLHNAHHS FT FTIKHTSSANQLPHFELVADGTRALRGAASDTKELNRAALGFKFKNAFLPFRKVHVSTE FT PDRAKNLISNMKNGFDGVLANIDPNHPHEARDRLLALDGSIEVHAPRKVSLIHLAGFPG FT CGKTKPIQALLKTSLFADYKVAVPTVELRAEWKADLALKTGQAWRLSTWESSLLKTASI FT LVIDEVYKMPRGYVDLAVAADPTVRFVILLGDPLQGEYHSSHPESQNKRLSSEIHRLLK FT YIDCYCLWSHRIPQCVARCFGVESSNEHEGYVGFSSFIAPQDITLACSQSSAKTLRDAG FT YPATTVSSSQGSTYRTPINLLLDRNSRRLSSAVSLVAATRSTMAINMTGDRDVLQQGPH FT NNPVFSALYNANLISLHSLFPTLFAKLPIIRTAITSRRGMLTGGNTFGEDDVIIDSRRP FT GPLNAPEVDDAFLPTWRRPLHRNLASAVHSNCPAQSTHVSPATITAVYPGESFENLAAH FT FLPAHDPEIKEILHRGEFSAQFPILLNQDFSLSAQSSTLIAAKHDSKRDPTLLVASITK FT RLRFRPSDSSYQLSSKDQILGLTLYHSWCRAYNRHPQAVVPFDELLFAECININEFAQL FT SNKTKSTIIANASRSDPDWRITAVKIFSKTQHKINEASIFGSWKACQTLALMHDYVVLF FT LGPVKKYQRIFDSQERPANVYYHAGHSPLEMSEWAQKHLRSGISHTNDYTAFDQSQHGE FT AVVFEMAKMRRLSIPESLINLHSYLKRNVDTQFGPLTCMRLTGEPGTYDDNTDYNLAVI FT YSKYLVLDHPIMVSGDDSVIGGNPTVSRNWPAIEKLLALRFKTESTKHPLFCGYYVGPA FT GAIRSPVTLFAKIMSAVDDLSIDDKLASYLSEFAIGHSLGHDFWDLLPIDQVPYQSAVY FT DFFCRHASREQKQILNIGEVPDTVLSSIASHLRFASRALYCLLPSSVRRALTSKKTVTD FT AFEDPDVSHMQGELLQNFQESNLTKLRGADMSDQVVKQLESNHVDSTPSLIPRPPFQGG FT SRTVPFQTVAMDVVAAGGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSP FT ITLDLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYV FT DTPKLTLNASDPTGSGSTATTVATVLVSGKLMFPTHWPHPHPSSRSLIQQCFG" FT CDS 5442..6044 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /note="putative start site from sg RNA" FT /db_xref="GOA:D9N3S1" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D9N3S1" FT /protein_id="BAJ14666.1" FT /translation="MSDQVVKQLESNHVDSTPSLIPRPPFQGGSRTVPFQTVAMDVVAA FT GGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITLDLVWSTNNVIFTD FT LQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKLTLNASDPTGSG FT STATTVATVLVSGKLMFPTHWPHPHPSSRSLIQQCFG" FT 3'UTR 6045..6095 XX SQ Sequence 6095 BP; 1308 A; 2109 C; 1307 G; 1371 T; 0 other; ggaaatacac atctccagtc agctccttta cgcaactgac ttttatttat ccatcatctg 60 tttgtttgcc cccggtatat cccatggcat tccaagacgc tatcaacaac ctatccagca 120 ccgtccaccg cgacacggtt gccgcacctc tcttagagag cattgcccaa cctctccgcg 180 actctcttca attatatccc tgggcgatca acgccgagaa acttgacctg ctgaagaaat 240 ttggcatttc tgtctccggc ctgggtcatc aagcccaccc tcatccgttc cacaagatca 300 tcgaaacgca tctccttttc caacattgga gccacaactg tcgagaggac tccacagtgc 360 ttttcatgaa gcccgaaaaa ttccaaaaac tcgcctcttt caaccctcac ttcaagcatc 420 ttctcaacta ccgccttcac gccaaggaca ccacccgcta tccagaaacc gcgtgcagtc 480 tccccaccac ttccaccgtg ttcatgcatg acgccttgat gtactacaaa ccttcccaga 540 tcatggatct gttcctccgc attccaaacc tcaacaacct ctacgcttcc gtggtggttc 600 ccgcggagag ctcattcacc gaccattcct tataccccga ggtttaccag tataagacta 660 tcaggagcca tctccactac gtccctgagt ccaatcactc ctcggcttac aatcaacctg 720 ccgacgccct tctctggctc gagctttcga ccatccaagg gccctccttc tccctcaccg 780 tcaccaggct cgactcttgg ggcccgtgtc actcgcttct gatccaacgc ggcataccac 840 cagcccacgt tgtcaatgac ttcgtcagct tcgacgtgcc agccgccgtt cttctccccg 900 aggccaccag cattcgtcaa cccacccgtc atcgcctagt gcctcaatct gtgtacaacg 960 ctctgtttac ttacactcga gccgttcgga ctctgcgcat ctccgatcca gtcggcttcg 1020 ttcgcacaca gtccaacaag ccagagcacg cctgggtcac gtcctccgcc tgggacaatc 1080 tccagcactt ttctctcctc actgcctcta accgtccttc caactcctat tcctggaatg 1140 gcagcctctg gcagcgcttc atctctcgcc tgcaaacagt ggtcgctgag ttgaaatctt 1200 cagccatctt cacttcctcc atcaccacgt tcctcttctc tctccttttc cagtacttcc 1260 gtcgaaaatc tgccacctct aggtctttgc ctagcgacct cggtttccgg aatctggacg 1320 agcacgttaa gctccatgaa ggcctcctcc aggctggttt tagttataca cacacttccc 1380 aaacccgcca agggcctcga gatttctacc acagggccgc tgagcgattc aaattcatgt 1440 ccgccctcgt tcgttccatc tccctctctc tccccctgct tgcgttcgcc atctattcca 1500 agtgcacgca gcccatgccc cctcagagcc ttcacgattc ctaccacaac taccatcatc 1560 caagcaagtg ggtccttgga tggagtcgcc ggctcaccgt ggtcactccc gaggccttcc 1620 tgcctttcga acctgttcca atccctgcgg accaattgcc gccacaatgg accccggccc 1680 ccctccagag cctgttgatc tcgcctcaga tgagaaactc ctctggtgcc ggcagcacgg 1740 cgtcgttcac ggccaccgac atcaccataa caataacggc ctccgcattt tcccctgcca 1800 cacctacacc gctgaaggga tgtccattat ctgcaccgat tacttgcctg acttcagtgg 1860 aacagagaac cctggccaac accaagccgc tcatcctgat gaccaagagg cgcaggcgga 1920 gccgcaccct tgccccctct cgcgcccgtc tcagaaccca aggctgcgcc tgctcagccc 1980 gcggagcctt gaaggtcctt cagcccgcca ccgccaagaa ggccgatcca gcaccccaaa 2040 aaactcgacg tatcaacacc tactctctga tgggggccga tcaagtgtac ccgtcgatga 2100 gcatggtgac ctcctcccaa tctcccacga ggagctgtcc tcggaaatca gccagcttat 2160 ggtcgaccca ccgcttatgg gcggtcagac ttcgcacact ctaccccgcg aactatatag 2220 gaacctccgc tgacttcctc actcgcctcc gcaacggccc cccaagccgt gtcccaatcc 2280 cagtgaacca gagttgcctc ttagtggcaa tcagcaaagc cacctccatc tcgctcgaag 2340 agttgtggaa gaccctcgct gccctcctgc ccgattctct cctgttgcct gaggacataa 2400 cgacccgcgg cctctccacg gaccacttcg tagtcttggc ttccgcccac tctttgaagt 2460 gcattttcat ctccggggcg ctcgagctcg agttaggcct ccacaacgca caccactcct 2520 tcacaatcaa gcacacaagc tcggctaatc aactgccaca cttcgagctc gtcgcggatg 2580 ggacccgggc ccttcgaggc gccgccagcg atacgaagga attgaaccgg gccgccctgg 2640 gtttcaaatt caagaacgcc ttcctcccgt ttcgcaaagt ccatgtctcc acggaacccg 2700 atcgcgccaa gaatctcatc tcaaacatga agaatggctt cgatggtgtc ctcgccaaca 2760 ttgacccgaa ccacccgcat gaagcccgtg accgcctcct tgcccttgac ggcagtattg 2820 aagtgcacgc ccccagaaag gtaagtctga ttcacctagc cgggtttcca ggctgcggaa 2880 agaccaagcc catccaggcc ctcctcaaga cgagcctatt tgcggattac aaagtggcag 2940 tgcccaccgt ggagttacgc gccgagtgga aagctgatct ggcgctcaaa accggccagg 3000 cttggagact ctccacttgg gagtcatcct tgctcaagac cgcctccatt cttgtcattg 3060 atgaggtgta caaaatgccc cgcggttacg tggatttggc ggtagcagct gatcctaccg 3120 tccgttttgt cattcttttg ggtgaccccc ttcaaggcga gtatcacagc tcccatccgg 3180 aatcccagaa taagcggctc tcctcggaga tccacaggct gctcaagtac atcgactgtt 3240 attgcctctg gtctcaccga atccctcaat gcgtcgcccg ctgtttcggg gttgagagct 3300 caaacgagca cgaaggttac gtgggcttca gctcctttat cgcacctcag gacatcaccc 3360 tcgcttgctc gcagagctca gccaagacct tgcgcgacgc cgggtaccct gccaccaccg 3420 tcagtagctc tcaaggttcc acttaccgca ccccaatcaa tcttctcctc gacagaaaca 3480 gtcgcagact gagcagcgcc gtctcgctgg tcgccgccac tcgttctacc atggccataa 3540 acatgacggg cgatcgggat gttctacaac agggcccaca caacaacccg gtgttctctg 3600 cgctttacaa cgccaatctg atatccctgc acagcctgtt cccaacgctt ttcgcgaagt 3660 tgccgatcat acgcaccgcg atcaccagtc gcaggggcat gctgaccggt ggcaacacct 3720 ttggtgagga cgacgttatc attgattcaa gacgtccagg cccgctgaat gctccagagg 3780 tcgacgatgc tttcctcccg acttggcgac gccctcttca ccggaatctt gcctctgctg 3840 ttcacagcaa ttgcccggcc caatccactc acgtctctcc ggccaccatc actgcggttt 3900 atcctggtga atcctttgag aatctcgcag cacatttcct ccccgctcac gaccccgaga 3960 ttaaggagat cttgcaccgc ggcgagttca gcgcgcagtt tccgattctc ctgaaccagg 4020 atttctctct ctccgcgcag tcttccacgt tgatcgcggc taagcatgac tccaagcgcg 4080 acccgacgct gctcgtcgcc tccattacca agcgcctccg tttccgccct agcgactctt 4140 cgtaccagct ctcctccaag gaccaaattc tgggcttgac cctctaccac agttggtgcc 4200 gagcttacaa ccgccacccg caggcagtcg ttccattcga tgagttgctg tttgcggagt 4260 gcatcaacat taatgagttc gcgcagctct cgaacaagac caagagcacg atcattgcga 4320 acgccagccg atcggaccct gactggcgca tcacagccgt caagattttc agcaaaacgc 4380 agcacaaaat caatgaagcc tccatctttg gatcctggaa ggcttgtcag acgctggctc 4440 tcatgcatga ttatgtcgtt cttttcctgg gtccggtcaa gaaataccag cgcatctttg 4500 actctcaaga gcgaccagcc aacgtgtatt accatgctgg ccactcccct cttgagatgt 4560 ccgagtgggc ccaaaagcac ctccgatcag gaatctctca cactaatgac tacacagcct 4620 ttgaccaaag ccagcatggc gaggcagtcg tcttcgagat ggccaagatg cgccgcttga 4680 gcatccccga gagcctcatc aaccttcatt cgtatctcaa gcgcaatgtt gacacccagt 4740 tcgggcctct aacgtgcatg aggctcaccg gcgaaccagg cacctatgac gacaacacag 4800 actacaacct cgcggtcatt tacagcaagt atctggtcct cgaccaccca atcatggtgt 4860 ccggagatga cagcgtgatt ggcggaaacc caacggtgtc tcggaactgg cctgccatcg 4920 aaaagctgct tgctcttcgc ttcaaaacag aaagcaccaa acatcccctg ttctgcggat 4980 actatgtagg accagccggc gccatcaggt ctccagtcac ccttttcgca aagatcatga 5040 gtgccgttga cgatctctcg atagacgaca aattggcaag ttacctgtct gagttcgcga 5100 tcgggcactc tctcgggcac gacttttggg atcttctgcc aattgatcaa gtcccttacc 5160 aatccgcggt gtacgacttc ttctgccggc atgcctcgcg cgaacagaag cagatcctca 5220 acatcggaga agtgcctgac acagttctat caagcatagc tagtcatctc aggtttgcca 5280 gccgagccct gtattgtctc ttgccgtcct cagttcgccg ggctctcaca tccaagaaga 5340 ctgtcaccga cgcttttgaa gatcctgatg tctcgcacat gcagggtgaa ttgcttcaga 5400 acttccaaga atctaaccta accaagctac gaggcgcaga catgtcagac caagtcgtca 5460 aacagctcga atccaaccac gtcgactcca ctccatctct catcccacgc ccccctttcc 5520 aaggcggcag tcgcacagtg cctttccaga ctgtcgcaat ggacgtcgtc gctgccggcg 5580 gcaatgcaac tttcaaccta gcgggccacg tctcgctttc tgagatcact gcaccgtacc 5640 gcaaggcgcg tctggcggaa ctcaaagcca tcgtctgccc caccgctgcg tccttccaat 5700 ccccgatcac tcttgacctc gtctggagca ccaacaatgt catattcacc gacctccaga 5760 tacttcaggt ctacgggggc acccgctttg ctatcggcgg gcccctcctc agccacacgt 5820 atgagctccg tgctgacctc agctacctca atcctgtcat caaggactcc gtctcatacg 5880 tggacactcc gaagctcact ctcaacgcct ctgacccaac tgggtctggt tcaaccgcca 5940 ccaccgtcgc caccgtgctg gtgagcggca agctgatgtt tccgacgcat tggccacacc 6000 cacacccctc gagtaggtcc cttattcagc aatgttttgg gtagtggagc cctctagcct 6060 ccaccttttc ctttcctctg gcaatagcgc ctaaa 6095 //