ID AB546335; SV 1; linear; genomic RNA; STD; VRL; 3860 BP. XX AC AB546335; XX DT 13-SEP-2010 (Rel. 106, Created) DT 17-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Lagenaria mild mosaic virus RdRP, TGB1, TGB2, TGB3, CP genes, partial and DE complete cds. XX KW . XX OS Lagenaria mild mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-3860 RA Kim O., Mizutani T., Soe K., Lee K., Natsuaki K.T.; RT ; RL Submitted (10-FEB-2010) to the INSDC. RL Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of RL International Agricultural Development, Graduate School of Agriculture; RL Sakuragaoka, Setagaya, Tokyo 156-8502, Japan XX RN [2] RX DOI; 10.1094/PDIS-02-10-0159. RX AGRICOLA; IND44433240. RA Kim O.-K., Mizutani T., Khin Soe, Lee K.-W., Natsuaki K.T.; RT "Characterization of Lagenaria mild mosaic virus, a New Potexvirus from RT Bottle Gourd in Myanmar"; RL Plant Dis. 94(10):1225-1230(2010). XX DR MD5; d08ef768e043caf56eab50703e6a33ac. XX FH Key Location/Qualifiers FH FT source 1..3860 FT /organism="Lagenaria mild mosaic virus" FT /host="Lagenaria siceraria (Mol.) Stand." FT /mol_type="genomic RNA" FT /country="Myanmar" FT /collection_date="2007" FT /db_xref="taxon:717848" FT CDS <1..1953 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:E0D4K0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E0D4K0" FT /protein_id="BAJ17497.1" FT /translation="EAFCLLFSNVELIIITGDSKQSVHHEGNEAANTSTLESFVPEANK FT ICRYYVNATHRNKKDLANKLGVYSEVTGITQVSISSTPIPGLHLLVPSLFRKKAFSEMG FT HKTSTYAGCQGITAPKVQILLTEETPLCSQEVLYTALSRAVHSIHFVNSSPNNPSFWAK FT LESTPYLKAFLSTLREESATEAKPREEGPTPVQPPKTHIPIDSALPLYDTIIEQMPEKH FT EREIFKEGKGHSNCVQTEDKFIQMFSHQQAKDETLLWATIEARLVISNPKANWQEYLEK FT RPIGDVLFESYKRAMQLPAQPIPFENKLWESCIHEVQKTYLAKPENMLKNGASRQSPDY FT DPNLISLFLKSQWVKKIEKLGAIKIKPGQTIASFHQATVMLFGTMARYMRRMREIFAPK FT EIMINCEVTPENLSSWAAGDMGCWTFKGPSLANDFTAFDQSQDGAMLQFEILKAKHHSI FT PDDILDAYLTIKTNSKIFLGTLAIMRLTGEGPTFDANTECNIAFTHTKFDIPKGVAQLY FT AGDDSAIDCLPRERPSFKLIADKLKLTSKPVISLQQKGDWAEFCGFRITPKGLIKDPMK FT LHASLMLEIKKKNVKNVLRSYELDLALAYQHKDALHELLSEEELRLHYDTVRTIVKSGG FT GDFLKTYLTKDESLY" FT CDS 1937..2626 FT /codon_start=1 FT /transl_table=1 FT /gene="TGB1" FT /product="triple gene block 1" FT /db_xref="GOA:E0D4K1" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:E0D4K1" FT /protein_id="BAJ17498.1" FT /translation="MNLFIEMLKENGFERTGLPLSSPLVVHAVAGAGKTTLIRKYLASN FT PNSLAFTHGIPDRRNLENRYLREFDSPVPGFFCILDEYPGGEYKEKWDVLIADPLQHEN FT EPMSPHFIKATSHRFGKNTEDLLTGLGFNLIGLKESDRVNISHIFGGPILGEVIALEPA FT ARHLLLDHGLKPHCPRSVLGQEFTEVTVVSFKPLSQFKDSADLYIALTRHSETLHVRTT FT GIPHPTP" FT CDS 2589..2921 FT /codon_start=1 FT /transl_table=1 FT /gene="TGB2" FT /product="triple gene block 2" FT /db_xref="GOA:E0D4K2" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:E0D4K2" FT /protein_id="BAJ17499.1" FT /translation="MSGRQGFLTPPPDHSKTFLALAVGVALALVIHSLLSYRLPTPGDN FT IHSLPFGGSYIDGTKRIFYNSPRAQSPSSKIWALGCIAVCLSLLHVFKTGDRTRSSSSC FT NCTCCT" FT CDS 2857..3060 FT /codon_start=1 FT /transl_table=1 FT /gene="TGB3" FT /product="triple gene block 3" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:E0D4K3" FT /protein_id="BAJ17500.1" FT /translation="MFSKQEIALGVLAAVIALAALNWHPRASTPICQIVLDGSSSKLVG FT DCSNIGADVVRALGETLARLRF" FT CDS 3114..3740 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:E0D4K4" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:E0D4K4" FT /protein_id="BAJ17501.1" FT /translation="MSATPFPAVTPELLAELKLGPTSNLLPTQDQLKIIADLIVAAKVP FT AASTTKVALELVNFCYDNGSSSYTNIQGPSSVEGVSLSQIASAIKASGTSLRKFCRYFA FT PIIWNLRTDQKPPANWEAAGYKPSAKFAAFDFFDGVENPAAMQPPQGLIRSPTQEERIA FT NHTNKQVNLFQAAAQDNNFASNSSFITRGQLSTSSPTIQYLPPPE" XX SQ Sequence 3860 BP; 1106 A; 1065 C; 829 G; 860 T; 0 other; gaggcttttt gcctcctgtt ttcaaacgtc gagctaatca tcatcaccgg tgactcaaag 60 caaagcgtac accatgaggg caatgaggcg gccaacacga gcacactgga aagtttcgtc 120 cccgaagcca acaagatctg ccggtactac gtaaacgcca ctcacaggaa caagaaagat 180 ctggcgaaca aattgggggt gtattcagaa gtcaccggca ttacgcaagt ctccatcagc 240 tccaccccaa tcccaggcct gcacctcctc gtcccgtcac tattcagaaa gaaagcattt 300 tccgaaatgg gacacaaaac ttcaacctac gcggggtgcc agggaatcac cgctccaaaa 360 gtccaaattc tgctaacaga agagacacct ctctgttccc aagaggtgct ctacaccgca 420 ctctccagag cagtacactc catccacttt gtgaattctt cgccaaacaa cccgagtttc 480 tgggctaagc tggaatctac cccatacctc aaggctttcc taagcaccct gagggaagag 540 tctgcaactg aagcaaaacc gcgcgaagaa gggcccaccc cagtccagcc gcccaaaact 600 cacatcccaa tagattcagc tctaccactg tatgacacca ttattgagca gatgcctgaa 660 aagcacgaga gagaaatttt caaagaaggc aagggacata gcaactgtgt tcaaacagaa 720 gataagttca tacagatgtt ctcccaccag caggcgaagg atgaaaccct cttatgggcc 780 acaattgaag ctcgcctggt tattagcaac ccaaaggcta attggcagga atatcttgaa 840 aagaggccca ttggagacgt cttattcgag tcttacaaga gggcaatgca gctgccggcc 900 caaccgatcc catttgaaaa taaactctgg gagtcctgca tccacgaagt gcagaagaca 960 tatctggcca aacccgagaa catgttgaaa aatggggcta gtaggcagtc tccggattac 1020 gacccaaacc tcatctcact cttcctcaaa tcacaatggg tcaagaaaat cgaaaagctg 1080 ggtgctatca agatcaaacc gggccaaact atcgcttcct tccaccaggc cacggtcatg 1140 ctctttggaa ccatggcacg ctacatgcgg agaatgaggg agatctttgc cccaaaggaa 1200 atcatgataa attgcgaggt cacgccggag aatttatctt cctgggcggc aggtgacatg 1260 ggatgctgga ctttcaaagg gccatcactg gctaatgact tcacagcctt cgaccaatct 1320 caggatgggg ctatgttgca gttcgaaatt cttaaagcca agcatcactc aattcctgat 1380 gatatcctgg atgcatattt aaccattaag accaactcaa aaattttcct aggcaccctg 1440 gcgataatgc gactcacggg tgaaggtccc acattcgatg ctaacactga atgcaacata 1500 gccttcaccc acacaaaatt cgacattcca aagggagtag ctcaactgta cgccggcgat 1560 gactcagcca ttgactgcct gccaagggaa cgacccagct tcaagctcat agcagacaaa 1620 ctcaaactta catcaaaacc agttataagt ctgcaacaga aaggggattg ggcagagttc 1680 tgtggcttca ggatcacccc aaagggctta atcaaggacc ccatgaaact gcacgcttct 1740 ctaatgctag aaattaagaa gaagaatgtt aaaaatgtgt tgagaagcta tgagttggat 1800 ctagcattgg catatcagca caaagacgcc ctccatgaac ttctgagcga ggaggagctc 1860 cgcctgcact acgacacagt tagaaccata gttaagtcag gtggcggtga ttttttgaaa 1920 acatacctta caaaggatga atctctttat tgaaatgctg aaggagaacg gattcgagag 1980 aaccggcttg cccctctcga gccccttggt cgtgcacgct gtcgcgggcg ccggcaaaac 2040 taccctaatt aggaaatact tagcttctaa ccccaattct ttagcgttta cgcacggaat 2100 ccctgacaga aggaatctgg agaatagata cctcagggag ttcgactccc cagtgcccgg 2160 attcttctgc atacttgatg agtaccctgg tggtgaatat aaagaaaagt gggatgtcct 2220 gattgcggac cctctccaac acgaaaatga gcccatgagc ccccacttca ttaaagctac 2280 tagccaccgc ttcgggaaaa acaccgagga cttattgacg ggtttaggtt tcaacttaat 2340 agggctgaaa gaaagcgacc gcgtaaacat atcacacatc tttggaggac caattctggg 2400 tgaggtcatc gccctcgagc cagcagcaag acacctcctc ctagatcacg gactcaagcc 2460 ccattgcccg agaagtgtcc tcggacagga gtttacggag gtcaccgtag tgagcttcaa 2520 accactctca cagtttaaag attctgcaga cctctacatt gcactgacca ggcattcgga 2580 aacactccat gtccggacga cagggattcc tcaccccacc ccctgaccac tcaaaaacct 2640 ttctagcctt agccgtagga gtagctttag ctttagtcat tcattccctt cttagttacc 2700 gtttgcccac accaggagac aacatccata gcctgccatt tggaggaagc tacatagacg 2760 gcaccaaaag aatcttctac aactccccaa gagctcagtc cccgagctca aaaatttggg 2820 cccttggttg catagcagtc tgcttaagtc tactccatgt tttcaaaaca ggagatcgca 2880 ctaggagttc tagcagctgt aattgcactt gctgcactta attggcatcc gagagcttca 2940 accccaattt gccagattgt tttggatggc tcatcatcca aactagtggg ggattgttca 3000 aacatagggg ccgacgtagt ccgggctcta ggggagacac tagccaggct taggttttag 3060 cttcaggtga aaatcaataa aacagtctgt ttaaagagtc ttttcgtgtc acaatgagcg 3120 ccacaccatt ccccgcagtg acccccgaac tacttgctga gctcaagctg ggaccaacct 3180 ccaacctcct gccaacgcag gatcagctca aaatcatcgc tgacctcatc gtagcggcca 3240 aggtaccagc tgcctcgact actaaagttg cactggaatt agtcaacttc tgctacgaca 3300 acgggtccag ttcatacacc aacatccaag gtccctcatc cgttgaagga gtctcactct 3360 cccaaattgc atcagctatc aaggcctccg gtacgtctct caggaagttc tgtcgctact 3420 tcgcacccat catctggaac ctgagaaccg accagaaacc acctgccaat tgggaggccg 3480 ctgggtacaa gccatctgct aagtttgctg cgttcgactt cttcgacgga gtggaaaacc 3540 cagcagcaat gcagcctcca cagggcctaa tcagatcacc cacccaagag gagaggatag 3600 ccaaccacac taataaacaa gtgaacctct tccaagctgc tgcacaggat aacaacttcg 3660 cttccaactc ctccttcata actaggggtc agctgtccac ttcctcacca acaatccagt 3720 acctcccacc acccgaataa gtgacacaac agtccagccc attgttttcg caattttgtt 3780 ggggctatcg agttttcaaa attgctttcg ctaatgccaa cctactacgc atcctagttt 3840 ttgttttaac agtattttca 3860 //