ID   AB539021; SV 1; linear; genomic RNA; STD; VRL; 2152 BP.
XX
AC   AB539021;
XX
DT   27-DEC-2009 (Rel. 103, Created)
DT   27-DEC-2009 (Rel. 103, Last updated, Version 1)
XX
DE   Japanese yam mosaic virus gene for polyprotein (NIb and CP region), partial
DE   cds.
XX
KW   .
XX
OS   Japanese yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2152
RA   Kajihara H., Ito S.;
RT   ;
RL   Submitted (21-DEC-2009) to the INSDC.
RL   Contact:Hiroshi Kajihara Yamaguchi Prefectural Technology Center for
RL   Agriculture and Forestry; Oouchimihori 1419, Yamaguchi 7530214, Japan
XX
RN   [2]
RA   Kajihara H.;
RT   "Control of mosaic disease in yam plants with mild strains of Japanese yam
RT   mosaic virus and molecular genetics of the virus";
RL   Unpublished.
XX
DR   MD5; ec91d5a6030b8ff89a592e8d5d2ba321.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2152
FT                   /organism="Japanese yam mosaic virus"
FT                   /strain="mild"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="Japanese yam"
FT                   /note="attenuated strain of Japanese yam mosaic virus;
FT                   YMO-6 vaccine"
FT                   /db_xref="taxon:79917"
FT   CDS             <1..>1941
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D1MZU9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D1MZU9"
FT                   /protein_id="BAI60051.1"
FT                   /translation="GKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTLLGGKTCVDD
FT                   FNNQFYELNIKGPWSVGMTKFYGGWDELLTKLPDNWIHCDADGSQFDSSLSPYLINAVL
FT                   NIRLHFMESWDIGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVL
FT                   LALKYSLLKDGVKAEMHKQIIRYFVNGDDLLISIDPEYESLLDTMQGNFKELGLKYPFN
FT                   SRTKDKSELWFMSHQGKRIENMWVPKLLYPPIVSILEWDRSKEPSNRMEAICAAMIKSW
FT                   GHRGLTHQIRRFYGWLLGQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEIYLKA
FT                   IFEDYTTEPEDLLVYHQSGEDTLDAGTSDPGKSKKQEGPKSVQGESPATEGFEPGDDPT
FT                   RKGKQQTVINLEKDVNIGTMGTFAVPRGKGLATKMNMPRVRGKAAMNLDHLLLYNPEQV
FT                   DLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNVNGMWVMMDG
FT                   EEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLA
FT                   RYGFDFYEVTSKPPARVREAHIQMKAAAFRGVQNKLFGLDGNVSTMEENTERHTAEDVN
FT                   RNMHSLLGVRGV"
FT   mat_peptide     <1..1071
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     1072..>1941
FT                   /gene="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 2152 BP; 713 A; 378 C; 517 G; 544 T; 0 other;
     ggaaaaatgg gtttgtggaa tggctctcta aaggcagaac tacgccctct agagaaggtg        60
     caggcaaata aaactcgcac tttcacagca gcaccactag acacattatt gggcgggaag       120
     acgtgtgttg acgatttcaa caatcaattt tatgagctca acataaaagg tccgtggagt       180
     gttggtatga caaagttcta tgggggatgg gatgagcttt taacgaagtt accagacaat       240
     tggatccact gtgatgccga tggttctcaa tttgatagtt ctttatcgcc ttatctgata       300
     aatgcagttc tgaacataag gttacatttc atggagtcat gggacatagg agaacaaatg       360
     ctgcgaaatc tgtacacaga aatcgtgtac actccaatcg caacaccaga tgggacaatt       420
     gtgaagaaat ttaaaggaaa caatagtggg caaccctcaa ctgttgttga caatacgctg       480
     atggtactgc tggctctcaa atattcatta ctcaaggatg gggttaaagc tgaaatgcac       540
     aagcaaataa tcagatactt tgtaaatggt gatgacctgc tgatcagcat agatccagaa       600
     tatgagagtc ttttagatac aatgcaaggg aatttcaagg aacttggtct taaatatcct       660
     ttcaattcta ggacaaaaga caaaagtgaa ctttggttta tgtctcatca aggaaaaaga       720
     attgaaaaca tgtgggtccc aaagttatta taccccccaa ttgtctcaat acttgaatgg       780
     gatcggtcaa aagaaccaag caataggatg gaagcaatat gtgctgcaat gatcaagtcg       840
     tggggtcacc gagggttaac tcatcagata cggagatttt acgggtggtt acttggacaa       900
     gctccatatt caggactggc agagattgga aaagcccctt acattgctga gagcgcactt       960
     cggaaattat atctagacaa agacgcagat cagagtgcta ttgaaatcta tttgaaggca      1020
     atatttgaag actatacaac tgaaccagaa gatttgcttg tataccatca gagtggtgaa      1080
     gatacattgg atgctggaac gagcgatcca ggcaaatcaa agaagcagga aggcccgaag      1140
     tctgtccaag gcgagtcacc ggcaacagaa ggatttgaac caggggatga tccaacgaga      1200
     aaaggtaaac aacaaactgt aatcaatctg gaaaaggatg ttaatatcgg tacaatgggg      1260
     acttttgccg taccacgggg gaaaggacta gcaacaaaaa tgaacatgcc tagagttaga      1320
     gggaaagcag ctatgaatct agatcacttg ttgctttaca atccagagca ggttgatcta      1380
     gccaacacaa gagctacaag gaaacagttt gacacatggt atgatggggt caaacgagat      1440
     tatgaactgg atgacagttc aatgcaaatt atcttgaatg gattgatggt ttggtgcatt      1500
     gagaatggaa cttcaccaaa cgtaaatgga atgtgggtta tgatggatgg agaagagcaa      1560
     atagaatatc caataaaacc actaatagat cacgccaaac ccacattccg acagataatg      1620
     gctcatttca gtaatgtcgc tgaagcatat attgaaaaga gaaatcagga aagagcgtac      1680
     atgccacgct atggacttca gaggaacctg acagacatga gtcttgctcg ttacgggttt      1740
     gatttttatg aagtaacttc aaaaccacca gcaagagtgc gggaggctca tatccaaatg      1800
     aaagcagcag cctttagagg tgtgcagaac aaactgtttg gattggacgg aaatgtcagc      1860
     acaatggaag aaaacacgga gagacacaca gctgaagatg tgaaccgcaa tatgcacagc      1920
     cttctcggtg tgaggggtgt gtaagctatg tgtaggtaat gatattatta tgtagtatcc      1980
     tacccgttta gagttattcc atatggtctt tacttttaag aatgaatgag atgagggtgg      2040
     ccctcaaatc tcttcctctt attgtgtgaa gaagtcgaac tcttctttgg tgtgattagg      2100
     tgtggtgtaa ctttgttacg aatcctttca catttgatta agagatagag ac              2152
//