Dbfetch
ID AB518486; SV 1; linear; genomic RNA; STD; VRL; 3854 BP. XX AC AB518486; XX DT 07-SEP-2010 (Rel. 106, Created) DT 16-FEB-2011 (Rel. 107, Last updated, Version 2) XX DE Melon mild mottle virus gene for polyprotein, complete cds, segment RNA 2. XX KW . XX OS Melon mild mottle virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3854 RA Tsuda S.; RT ; RL Submitted (25-AUG-2009) to the INSDC. RL Contact:Shinya Tsuda National Agricultural Research Center; Kan-nondai RL 3-1-1, Tsukuba, Ibaraki 305-8666, Japan XX RN [2] RX DOI; 10.1094/PHYTO-06-10-0150. RX PUBMED; 20955084. RA Tomitaka T., Usugi T., Yasuda F., Okada H., Tsuda S.; RT "A novel member of the genus Nepovirus isolated from Cucumis melo in RT Japan"; RL Phytopathology 101(3):316-322(2011). XX DR MD5; 2184e940cbe6273c801372623bb31224. XX FH Key Location/Qualifiers FH FT source 1..3854 FT /organism="Melon mild mottle virus" FT /segment="RNA 2" FT /host="Cucumis melo" FT /mol_type="genomic RNA" FT /country="Japan:Tottori" FT /db_xref="taxon:669377" FT CDS 122..3484 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:E0D3E8" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E0D3E8" FT /protein_id="BAJ16224.1" FT /translation="MAVVRPSSFPLSVEELKLFTAEIYHQYFVRADARRAARARVREIL FT RSVGGWFYCPAAGHHAPLYEEVYDLPREEIEALCRWARAHPEVFPPIEVEEAFEEEPEF FT VIPVAKPEFVNVAWRSVERSTTVVVEDCETVPGVEWSEVAALAEAVDALAVADVLEAFE FT ELPLEYPAPAPVKVGLAFFQARRKCVQVEHKELLRQSLPKAIAAASAPRCGYPVKGIFE FT GDGRVFVACAPASSEQAESSAAQQQLRDEGGIPTVVQVAKRLRNRNVALTSTSKKSFFF FT KEAGESRTIEGGGVELTEKDVFHRMGVVKSWRTPDHNKTFVACVRPIEQETVRMPKLRP FT DEKLECVPIFSPLPRCLEETVRRLLEAGWKNTSSVCTDILVQSHLGVGTPVSALLTIVD FT SRTDDATEALLCGAFIKLGSDFAKFLSTPLINFPLSKEIQDLDQYLGGLRLVTYLNNVQ FT GFYEGTPLFSYGTVEFQEHRPVVSSVTRTREGWDDLIANNERQGFRVQAGFNTIQPIEK FT DTQPMLPDFPDFDLVSVPRQVQRPILVGQDGVQAPLQRCSSVRVPGFRMAGGAPRFSVE FT RGRVSRQTDVNIYDVNDNPRHFQAMADCPIVDTVGNLAYVSGFNIPKDAKQGTVLLTSN FT LRAIARADLMPCWWKWWEENLASLEFRFEFELAGSPYSGLALACTIDWYSRLDVGKMGN FT IMAPVVSTLLPTEVFSCRAGGMQSYTFSTDEVANYAQATWSAAYDINPMVYVYVFTTNQ FT MVMASDWVVDYRLYMKSQKTTQFLQQPYHVWPPALPSTVKIDRWFPPLSFKLGATTRSV FT QIPLNLARIEETGYGKCINLISAFLSNFQSIGGRLRCRLLPTSSIFVGAELAAAITSTG FT DPVPRKDLWTMPHVRLDSLGCEFELEIRSSYLVTPLRSKDPKLHPHLQIYLVSGVTAPK FT DSSSDFEFAIKIESIEQAHSPMRVLSDETWFCWFTLTDFTEDLVSLKIPSRIADLEVKS FT ATIMHATNPFSLMVASAGLMAGDCELEFTWDWSMKFGEHVGAIEFTTGYGADEDFQSYG FT RNLTVPLSQLRWVERYTIGSFSGATTSKALTEYSNFIRFRGSQLKSLRSVRVNVRPLAG FT FAFYGRSVSPLVK" XX SQ Sequence 3854 BP; 833 A; 797 C; 1017 G; 1207 T; 0 other; agttaaaatc tctctaagga tcactcttgt tgtgtgtagt acttcttctt tcgaattcta 60 agtttctcgc aaaattgaga tactcatttt cagcgtttgt gtcctggttc tggttctttt 120 gatggcggtc gtccgccctt cttcctttcc tctcagtgtt gaagagctta agctcttcac 180 tgctgaaatc taccatcagt atttcgtacg tgctgatgct cgccgtgcgg cgagagcacg 240 agtacgtgag atcctccgat ctgttggagg atggttctac tgtccagcag ctgggcatca 300 tgccccgttg tatgaagagg tttacgatct tcctcgtgag gagattgaag ccttgtgtag 360 gtgggctcgc gctcacccag aagtttttcc ccctattgag gtggaagagg cttttgaaga 420 agagcctgag tttgtgattc cggtggccaa accggaattc gtcaacgttg cgtggcgcag 480 cgttgagcgg tccaccactg ttgtggtgga agattgtgag accgttcctg gtgtggaatg 540 gtcagaggtt gctgccttgg ctgaggcagt ggatgcgtta gcagttgctg acgtgttgga 600 agcttttgag gagcttccac tggagtaccc agctccagcc ccggtaaaag tgggactggc 660 ctttttccag gccaggcgga aatgtgttca ggttgaacac aaggaactct tgcggcagag 720 tttgccgaaa gcgattgctg cagcgtctgc accccgctgt ggctaccctg ttaagggtat 780 ttttgagggt gatggccgcg tctttgtggc gtgtgcgcct gcttcctctg agcaggccga 840 gtcgtcagct gcccaacagc agctgaggga tgaaggtggt attcccaccg tcgtccaggt 900 tgcaaagcgg cttagaaatc gcaatgtggc cctgacttcc acttccaaga agagtttttt 960 ctttaaggaa gcaggggaat cccgcaccat agaaggcggt ggtgtggaat taactgaaaa 1020 agacgtcttc catcgtatgg gtgtcgttaa atcctggcga acccccgacc ataataagac 1080 gttcgtggcg tgcgtgcggc ctattgagca ggaaactgtt cgtatgccaa agctacgccc 1140 tgacgaaaag ctggagtgcg ttccaatttt ctctcccttg ccgcgttgct tggaggagac 1200 tgttagacgc ctcctggagg ctggttggaa aaatacatcg tctgtttgca ctgatatttt 1260 agtgcaaagt catttgggtg ttggcactcc tgtgtctgcc cttttgacca ttgttgattc 1320 gcgaacagat gatgctacag aagcgttgtt gtgtggggct tttattaagc ttggcagtga 1380 ttttgccaaa tttttgtcca caccgctgat taattttcct ttatctaagg agattcagga 1440 tcttgatcag tatttgggtg ggttgcgttt ggtgacctat ctaaacaacg ttcaaggatt 1500 ttatgagggg actcccttgt tctcttatgg aactgtcgag tttcaagaac atcgaccagt 1560 cgtctcttcc gtcacgcgta cgcgtgaagg atgggacgat ttgatcgcaa ataatgaacg 1620 acagggtttt agggtgcaag ctggatttaa cacgattcag cctatagaga aggacactca 1680 gccaatgtta ccggattttc ctgattttga tctggtgagt gttccgaggc aggtccaacg 1740 cccgattttg gttggacaag acggcgtgca agctccactg caacgctgtt caagtgttag 1800 agtgccaggt tttcgtatgg caggtggagc acctcgtttt tccgtcgaac ggggtcgtgt 1860 atctaggcag acggatgtaa atatttatga tgttaatgat aatccccgcc atttccaagc 1920 aatggcagat tgtccaatag tagatactgt tggcaatctt gcgtacgtga gtggctttaa 1980 tattccaaaa gatgctaagc agggaactgt tttgttaaca tctaatttga gagccatagc 2040 acgtgctgat cttatgccct gctggtggaa atggtgggag gaaaatttgg catcactgga 2100 gtttaggttt gagtttgagc tggctggtag tccttattct gggctggctc ttgcatgcac 2160 cattgattgg tatagtcgcc ttgatgttgg gaaaatgggt aatattatgg caccagtggt 2220 gtccactttg ctcccaacag aggtgttttc ttgcagagca ggaggcatgc agagttatac 2280 cttttctact gatgaggtag ctaactatgc tcaagccact tggtcggccg cctatgatat 2340 taatccaatg gtttatgtgt atgtttttac cacgaaccaa atggttatgg cgtcggattg 2400 ggtagttgat tatcgtttgt atatgaaatc tcagaaaact actcagttct tgcagcagcc 2460 gtatcatgtg tggcctcccg cgttgccgtc tactgttaaa attgaccggt ggtttccccc 2520 actttctttt aagttgggag ctactacaag atctgttcag attcctttga atctggccag 2580 aattgaagag acgggatacg ggaaatgtat aaatttgatt tctgcgtttc tttctaattt 2640 tcagagtatt ggaggaaggt taaggtgtcg tcttttacct acttcttcca tctttgttgg 2700 agctgaactt gcagcggcga taactagcac tggtgatcca gtgccacgta aagatttgtg 2760 gacaatgccg catgttcgcc ttgacagctt gggatgtgaa tttgaacttg aaattcggag 2820 ttcctatttg gttactccgt tacgtagtaa ggatcccaag ttgcatccac acctgcagat 2880 ctatcttgtg agtggtgtta ccgctcccaa ggatagttct tcggattttg agtttgcaat 2940 taaaattgaa tctattgagc aagctcattc accaatgcgc gttttgtctg atgaaacgtg 3000 gttttgctgg ttcactctca ccgattttac tgaggatttg gtttcgttaa agattccatc 3060 tcgtattgct gatttggagg tgaaaagtgc aaccattatg catgcaacca acccgttttc 3120 tcttatggtc gcttctgctg gtcttatggc tggtgattgt gaactagagt ttacatggga 3180 ttggtccatg aaatttggtg aacatgtggg tgccatagaa ttcaccacgg gatatggagc 3240 cgatgaagac tttcagtctt atggacgtaa tttgactgta cctctatccc agttgcgctg 3300 ggttgagaga tacactatcg gttccttttc cggtgcgact accagcaagg ctttgactga 3360 gtatagcaac tttattcgct ttcgtggttc tcaactcaag agtttgagat ccgtgcgagt 3420 aaacgttcgc ccgttagctg gttttgcgtt ctatggtcgt agtgtttccc ccttggtgaa 3480 atgaggagac atgttctaaa actaagctgt gttggtaagt ttctttttga accaacactc 3540 attgggagtt actaacccga tgagcagcgg ctagagtaaa ggttttgctc ctggtggtga 3600 cgtgccaggc tctagtggcg agtttccctg tttatcagga aatagggtcg catttgcctg 3660 agtgtaaggt ggtgtaaggt gtgctacggc ttgttccgta ggcatataag ccacgaattt 3720 atcaggtttt cttgtgtttt tcttttgttt atgatgttgg acttttgtcc cttcagggtt 3780 tgccagtttt ccctgtcgct tttcttctgg cgcaaaaaga ttttctattt cttttagtgt 3840 cgctgagtca cagc 3854 //