ID AB509463; SV 1; linear; genomic RNA; STD; VRL; 3566 BP. XX AC AB509463; XX DT 09-MAY-2010 (Rel. 104, Created) DT 09-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Sweet potato feathery mottle virus gene for polyprotein, P1, HC-Pro and P3 DE region, partial cds, isolate: 19-T. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-3566 RA Yamasaki S., Sakai J., Fuji S., Hanada K.; RT ; RL Submitted (19-JUN-2009) to the INSDC. RL Contact:Shuichi Yamasaki Oita Prefectural Agriculture, Forestry and RL Fisheries Research Center, Safety Farming Research institute; Kitausa 65, RL Usa, Oita 872-0103, Japan XX RN [2] RX DOI; 10.1007/s00705-010-0633-0. RX PUBMED; 20336334. RA Yamasaki S., Sakai J., Fuji S., Kamisoyama S., Emoto K., Ohshima K., RA Hanada K.; RT "Comparisons among isolates of Sweet potato feathery mottle virus using RT complete genomic RNA sequences"; RL Arch. Virol. 155(5):795-800(2010). XX DR MD5; 02ddc8c0f8a3a1bf99fcdfbbfcfc33c6. XX FH Key Location/Qualifiers FH FT source 1..3566 FT /organism="Sweet potato feathery mottle virus" FT /strain="C" FT /isolate="19-T" FT /mol_type="genomic RNA" FT /db_xref="taxon:12844" FT 5'UTR 1..162 FT CDS 163..>3566 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D5MRD1" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:D5MRD1" FT /protein_id="BAJ07204.1" FT /translation="MASATVSVKPAGKRKLTWKECCNKWGKAAMEQQQAAYPRRKVELS FT RNQLAANIFAFVPETEWHKYYFGNRGGPSPQLEVLSNAIQYGEVFKYKFDFTFCPECDE FT FLEGHKCEECGTIFRKTDDNLADNMNVVARELGGYDAYYASTWSEFEQAKLELEEVAPT FT AGQLRRQARAAEKLLDKRSTRKEKEYVDSLWEAVEEAETKETGEASDASEKAAELSGIS FT SSATADEMFPPLVGNKNTEVITTTSDVIVSECPNTQFGQINEFTPEEGKDEKVVESLVE FT EAENVTVPAVMPIETGFFFGTIPAIIPLPVVVPQQGNMGVLQPAFMQVGTIPVNGIALA FT DTHLEIKETAVKKAEPTKEDTDVGAQKSTSLPAHLYPWAPRPKNSGATRHQMVRKWVKK FT TQEAEEVKQKAVWKKLDEQLAVRNEAKKDLKVKWRWGLYRLVKKTRKDNQRQRQKKRME FT KEQQLLLAMPPQILTGISIAGGPVASLQETPTVSGKILSTPSMKRKRILKSPTLSFDKI FT QELIQATLKIACKQGLQVEIINKKTVKGAYRQHGGTNHLFLHLKHMEGWRKPVDLHIHQ FT EDIELVTMAARVGAWNKKFHTSQLCRGTSGLVLNPDKLTGPRGHAPKGLFVVRGALAGV FT VYDARMRLGRSILPFIEQFSSTMERFLRGFDEKFKQLRQVDSDHVCESTYDAEQAGAVA FT AIIHHMVCPMNRTTCKHCSNKIEDLSKDEWCDYVRNFASKNKLPFQLEFKDFKHLPLII FT DFITDSLVQTNKDVRAFNEIQTLIGNRTDAPFTTVCEVNKVLVKGGRAKSAEFAKASEA FT LLELARYLKNRTENIKKGSLQSFRNKISQKAAMNLALMCDNQLDKNGNLIWGERGYHSK FT RFFSNYFEEINPEEGYSKYIVRSNPNGTRKLAIGKLIVSTNFSVFREQMKGEPIHKQKL FT DNHCTSTLDGNFIYPCCCVTYDDGQPMESEFKLPTKNHLVIGNSGDPKYVDMPPEISKK FT MYIAKEGYCYINIFLAMLVNVNEAEAKDFTKQVRDVLMEKLGKWPTMFDVATACAFMSV FT FYPETRNAELPRILIDHTTKTMHVIDSFGSLSTGYHILKANTVSQLIKFANSSLDSEMK FT HYLVGGLTALPANEERCVRTVIKGVYRP" FT mat_peptide 163..2124 FT /gene="P1" FT mat_peptide 2125..3498 FT /gene="HC-Pro" FT /note="a protein with helper component activity and FT proteolytic activity" FT mat_peptide 3499..>3566 FT /gene="P3" XX SQ Sequence 3566 BP; 1137 A; 702 C; 853 G; 874 T; 0 other; aaaaataaca caacacaata caacacaaca caactcaaac aagctttctt tgcatttgat 60 ttcacaactt ttcaaagtcg aacactctca atttaagctt tttagatcgt ttgtcttttg 120 tctatttcaa ggaaaatcca aaaatatttc tgtttcaata gcatggcatc tgccaccgta 180 tctgtgaagc cagctggtaa gcgcaagctt acatggaaag aatgttgcaa caaatggggt 240 aaggctgcaa tggaacagca gcaagctgcg tacccaaggc gaaaggttga actgagtcgc 300 aaccaactgg ctgcgaatat tttcgcgttc gtgccagaaa ctgaatggca caaatactac 360 ttcggtaacc gtggaggtcc atctccacag ctagaagtgc tctccaacgc catccagtat 420 ggcgaagtat ttaagtacaa gttcgatttc acattctgcc cagaatgtga cgagtttctt 480 gaggggcaca agtgtgagga gtgcggaacc atattccgca aaactgatga caacttggcg 540 gacaatatga atgtcgttgc cagggagctg ggaggatatg acgcatacta tgcgtctaca 600 tggtctgagt tcgagcaggc taagctcgaa ttggaggaag tagctccaac tgctgggcaa 660 ctcagaaggc aagcaagagc tgctgagaag ctgctggata aacgatctac aaggaaagag 720 aaggaatatg tggatagcct ttgggaggct gttgaggagg ctgaaacaaa agaaactgga 780 gaggcgtctg atgcctcaga gaaagctgct gagctttctg ggatttcttc atcagcaaca 840 gctgatgaga tgtttccacc tcttgtggga aacaagaaca ctgaggttat cacaaccacg 900 tctgatgtga ttgtttctga gtgtccaaat actcagtttg gccagataaa tgaatttacg 960 ccagaagagg gcaaggatga gaaggtggtc gaatctcttg tggaagaggc tgaaaatgta 1020 actgtacctg cagtgatgcc tatagagact ggtttcttct tcgggaccat tcctgccatt 1080 atcccactgc cagttgtagt cccacagcag ggaaacatgg gagtgctgca acccgcattt 1140 atgcaagtgg gtactatacc agtgaatggt attgccctag ctgatactca cttagaaata 1200 aaagaaactg ctgttaagaa agctgaaccc acgaaagaag acaccgatgt aggtgcccag 1260 aaaagcacct ctttgccagc acacttgtat ccatgggcac ccaggcccaa aaattctggt 1320 gcaacacgcc atcagatggt tcgcaaatgg gtaaagaaga cccaggaagc tgaagaggtg 1380 aagcaaaaag ctgtatggaa aaaactggac gaacaattag cagttcggaa cgaagcaaag 1440 aaagacctca aagtgaagtg gaggtggggt ctttacaggt tggtcaaaaa gaccagaaag 1500 gacaatcaaa ggcagcggca gaagaaacga atggaaaagg agcaacaact gctccttgcg 1560 atgccacctc agattttaac gggcatttcg atagctggtg ggccagtagc gagtctgcag 1620 gagactccca cagtgagtgg gaagatttta tcgacgcctt ctatgaagcg gaaaaggatt 1680 ttaaaatctc caaccctgtc attcgacaag atacaagagt tgatacaagc aactttaaaa 1740 attgcttgca aacaagggct tcaagtggag attatcaaca agaaaaccgt gaaaggagct 1800 tacagacaac acggaggaac aaaccatttg ttccttcatt taaaacacat ggaaggatgg 1860 aggaagcctg tggatctgca catccaccaa gaggatatcg agcttgtaac aatggcagct 1920 cgcgtaggtg catggaacaa gaaattccat acaagccagc tatgcagagg taccagtggg 1980 ttagttctca acccagacaa gctgacaggt ccacgaggtc atgcgcccaa gggactcttc 2040 gtggttcgtg gggctttagc aggagtggta tacgacgcgc ggatgcgtct tggtaggtcc 2100 attttaccat tcatcgagca attcagctct acaatggaaa gatttctgcg cggttttgat 2160 gagaagttta aacaattaag gcaagttgat agcgaccatg tttgtgaatc aacatatgat 2220 gcagaacaag ctggggccgt agctgccatt atacaccata tggtgtgccc tatgaataga 2280 actacttgca aacactgctc gaataaaatc gaagatttga gtaaggacga atggtgtgat 2340 tatgttagaa actttgcaag taagaataaa cttccatttc agttagaatt taaggatttt 2400 aagcatttgc ctttaataat agattttatc acggactcac ttgtacaaac aaataaagat 2460 gtgagagcat ttaatgaaat tcagacctta attggtaata gaactgatgc accttttaca 2520 actgtttgtg aagtaaataa agtgttagtg aaaggtggca gggctaaaag tgctgaattc 2580 gccaaggcgt ctgaggcctt acttgaactt gcacgatacc tcaagaatcg tactgagaat 2640 atcaagaagg gatcactgca atcgttcaga aacaagatct cgcagaaggc tgcgatgaat 2700 ttagcactca tgtgcgacaa tcaattggac aagaatggca atctcatttg gggagaaagg 2760 ggatatcatt ccaagagatt cttctctaat tattttgagg agataaaccc tgaggaaggg 2820 tattcaaagt acattgtgcg gagcaaccca aatggcacaa ggaaattggc aataggcaaa 2880 ttaattgtct ccacaaactt ctcggtgttt agggagcaaa tgaaaggaga acccattcac 2940 aaacaaaagc ttgacaatca ttgcaccagt acacttgatg gaaatttcat ttatccgtgc 3000 tgttgtgtca cttatgatga tggacaaccc atggagtctg agtttaaatt gccaactaag 3060 aaccatcttg tcattggcaa ttctggggat ccgaaatatg ttgacatgcc tccagaaatt 3120 agcaagaaaa tgtacatcgc taaggaagga tattgttaca tcaatatatt tcttgctatg 3180 ctcgttaatg tcaatgaggc agaagcgaaa gacttcacta aacaagttcg tgatgttctc 3240 atggagaagc ttggaaagtg gccaacaatg ttcgatgtag ctacagcatg tgctttcatg 3300 tccgtgtttt atccagagac acgcaatgca gagttaccaa gaattttgat cgaccacact 3360 acgaagacca tgcatgtgat tgattcattt ggttcattga gcacaggata ccacatcttg 3420 aaggctaata cagttagcca gcttattaag tttgcgaaca gttcacttga ctccgaaatg 3480 aagcattatt tagttggggg cttaactgca ttaccagcta atgaggagag atgtgtgcgc 3540 accgtaataa aaggagtata cagacc 3566 //