ID AB506799; SV 1; linear; genomic RNA; STD; VRL; 3062 BP. XX AC AB506799; XX DT 10-JUN-2009 (Rel. 101, Created) DT 10-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Cucumber mosaic virus RNA 2, complete sequence, strain: LiCB. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3062 RA Chung B.N., Yoon J.Y.; RT ; RL Submitted (05-JUN-2009) to the INSDC. RL Contact:B N Chung National Institute of Horticultural & Herbal Science, RL Horticultural & Herbal Crop Environment Division; 540-41, Tap-dong, RL Kwonsun-gu, Suwon 441-440, South Korea XX RN [2] RA Chung B.N., Yoon J.Y.; RT "Characterization and sequence analysis of two cucumber mosaic virus RT isolated from lily"; RL Unpublished. XX DR MD5; 64a2a378b2c08f698312b3260ac4a90b. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3062 FT /organism="Cucumber mosaic virus" FT /segment="RNA 2" FT /strain="LiCB" FT /mol_type="genomic RNA" FT /country="South Korea" FT /isolation_source="Lily" FT /db_xref="taxon:12305" FT CDS 85..2658 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="replicase" FT /db_xref="GOA:C4TP50" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:C4TP50" FT /protein_id="BAH70364.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSSEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRFGQLWCPAFNKCTFISSIAMARVLLLAPRTSDRTMKCFEDLVAAIYTKSDFYYDEEC FT EADDVQTDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCRYEKCPTPTIATPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDSSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCTPEFRVERVNSTKQRKKYGIERGRNDKRRTPTGSYSGGEETETKVSQAESTG FT TRSQKSQRESAFKSQTVPLPTILSSRWNGTDRVMPPYECGGVTRA" FT CDS 2417..2749 FT /codon_start=1 FT /transl_table=1 FT /gene="2b" FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:C4TP46" FT /protein_id="BAH70365.1" FT /translation="MELNAGAMTNVELQLARIVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFFQVDGMELTGSCRHMNVAELPEPEASRLELSAEDHDFDDTDWFAGND FT WAEGAF" XX SQ Sequence 3062 BP; 769 A; 694 C; 712 G; 887 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagacttt 60 aaatctctgt ctagtatctt tctcatggct ttccccgccc ccgctttctc actagccaat 120 cttttgaacg gcagttacgg tgtcgacact cccgaggaag tggaacgttt gcgatctgag 180 caacgtgaag aggctgctgc ggcctgtcgt aactacaggc ccctacccgc tgtggatgtc 240 agcgagagtg tcacagagga tgcgcattcc ctccgaactc ctgacggagc tcccgctgaa 300 gcggtgtcaa gtgagtttgt tacttatggt gctgaagatt accttgaaaa atctgatgat 360 gagctccttg tcgcttttga gacgatggtc aaacccatgc gcttcggaca actatggtgc 420 cccgcgttta ataaatgtac ttttatttcc agcattgcta tggccagagt tttgctgctg 480 gcacctagaa catccgaccg aaccatgaag tgttttgaag acctagtcgc ggctatttac 540 actaaatccg acttctatta cgatgaagag tgtgaagccg acgacgttca gacagatatc 600 tcgtctcgcg atgtacccgg ctattctttc gagccgtggt cccgaacgtc tggattcgaa 660 ccgccgccta tttgtgaggc gtgcgacatg atcatgtacc agtgcccgtg ttttgatttc 720 aatgctttga agaaatcgtg cgctgagagg actttcgctg atgattatgt tattgaagga 780 ttagatggtg ttgttgacaa tgcgactttg ttgtccaatt tgggtccatt tttggtaccc 840 gtgaaatgtc gatatgagaa atgtccaaca ccgaccatcg cgactcctcc ggatttaaat 900 cgtgctactg atcgtgttga tattaatctg gttcaatcca tttgtgactc gactctgccc 960 actcacagta attacgacga ctcttttcat caggtgtttg tcgaaagcgc agattactct 1020 atagatctgg atcatgttag acttcgacag tctgatctca ttgcaaaaat tccagattca 1080 gggcatatga taccggttct gaataccggg agcggtcaca agagagtagg tacaacgaag 1140 gaggtcctta cagcaattaa gaaacgtaat gctgacgttc cagagctagg tgattccgtt 1200 aatctgtcta gattgagtaa agctgtggct gagaggtttt tcatttcgta catcaatggt 1260 aactctctag catccagtaa tttcgttaat gtcgttagta atttccacga ttacatggaa 1320 aagtggaagt cttcaggtct ctcttatgat gatcttccag atcttcatgc tgagaatttg 1380 cagttttatg atcacatgat aaaatctgat gtgaaacctg ttgttagcga cacgctcaat 1440 atcgacagac cggttccagc tactataacg taccataaga agagtataac ctcccagttc 1500 tcaccattat tcacagcgct atttgagcgc ttccagagat gccttcgaga acgtattatt 1560 cttcctgttg gtaagatttc atctcttgag atggcggggt tcgatgttaa aaacaagcac 1620 tgtctcgaga ttgacttgtc taaatttgat aagtctcaag gtgaattcca tttgctaatt 1680 caggaacaca ttttgaatgg tctaggatgc ccagctccga taaccaagtg gtggtgtgat 1740 ttccaccgat tctcttacat tagagatcgt agagctggtg ttggtatgcc tatcagtttc 1800 cagagacgaa ccggtgatgc gttcacttac tttggcaata ccatcgtcac catggctgag 1860 ttcgcctggt gttatgacac cgaccaattc gaaaagcttt tattctcagg tgatgattct 1920 ctgggatttt cattgcttcc ccctgttggt gattcgagta aattcacaac tcttttcaac 1980 atggaagcta aggtgatgga acctgccgta ccatatattt gttcgaagtt cttactctct 2040 gacgagttcg gtaatacatt ttccgttcca gatccattgc gcgaggttca gcggttagga 2100 acaaagaaaa ttccctattc tgacaatgat gaattcttgt ttgctcactt catgagcttt 2160 gttgatcgat tgaagttttt ggaccgaatg tctcagtcgt gcatcgatca actttcgatt 2220 ttcttcgaat tgaaatacaa gaagtctggg gaagaggctg ccttaatgtt aggcgccttt 2280 aagaaatata ccgctaattt tcagtcctac aaagaactct actattcaga tcgtcgtcaa 2340 tgcgaattga tcaattcgtt ttgtacccca gagtttaggg ttgagcgtgt aaattccact 2400 aaacagcgaa agaaatatgg aattgaacgc gggcgcaatg acaaacgtcg aactccaact 2460 ggctcgtata gtggaggcga agagacagag acgaaggtct cacaagcaga atcgacggga 2520 acgaggtcac aaaagtccca gcgagagagc gcgttcaaat ctcagactgt tccgcttcct 2580 accattcttt caagtagatg gaatggaact gacagggtca tgccgccata tgaatgtggc 2640 ggagttaccc gagcctgagg cctctcgttt agagttatcg gcggaagacc atgattttga 2700 cgatacagat tggttcgccg gtaacgattg ggcggaagga gccttctgaa cctccccttc 2760 cgcacctccc tccagtttca tggcgggagc tgagttggca gtattgctct aaactgtctg 2820 aagtcactaa gcacacagtg tgtcactgta cacattgtgg tgaacgggtt gtccatccag 2880 cttacggcta aaatggtcag tcgtggagaa atccacgcca gtagacttac aagtctctga 2940 ggcacccttg aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacttctag 3000 cacaatgtgc tagtttaggg tacgggtgtc ccccactttc gtgggccttc aaaaggagac 3060 ca 3062 //